RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NR1H3Q13133 447 aa6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 FAM160A2Q8N612 972 aaPredicted RBP6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 RETREG2Q8NC44 543 aa6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 PBXIP1Q96AQ6 731 aa6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 FKBPLQ9UIM3 349 aa6.87□□□□□ -1.31
RNU6-28P-201ENST00000362378 DXOO77932 396 aaKnown RBP6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 MMP16P51512 607 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 EIF4G2P78344 907 aaKnown RBP eCLIP6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 SEMA3FQ13275 785 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 NYAP1Q6ZVC0 841 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 UCN2Q96RP3 112 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 SPSB2Q99619 263 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 EVA1BQ9NVM1 165 aa6.86□□□□□ -1.31
RNU6-28P-201ENST00000362378 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
RNU6-28P-201ENST00000362378 ZBBXA8MT70 800 aa6.85□□□□□ -1.31
RNU6-28P-201ENST00000362378 FBXO45P0C2W1 286 aa6.85□□□□□ -1.31
RNU6-28P-201ENST00000362378 MAP10Q9P2G4 905 aa6.85□□□□□ -1.31
RNU6-28P-201ENST00000362378 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
RNU6-28P-201ENST00000362378 PDE4CQ08493 712 aa6.84□□□□□ -1.31
RNU6-28P-201ENST00000362378 TFIP11Q9UBB9 837 aaKnown RBP6.84□□□□□ -1.31
RNU6-28P-201ENST00000362378 HCSTQ9UBK5 93 aa6.84□□□□□ -1.31
RNU6-28P-201ENST00000362378 KCNH2Q12809 1159 aa6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 KCTD17Q8N5Z5 321 aa6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 ARMC2Q8NEN0 867 aa6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 GPKOWQ92917 476 aaPredicted RBP eCLIP6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 NUDT12Q9BQG2 462 aa6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 GPSM3Q9Y4H4 160 aa6.83□□□□□ -1.32
RNU6-28P-201ENST00000362378 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 ZBTB7CA1YPR0 619 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 ZPR1O75312 459 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 ADH1BP00325 375 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 RFX1P22670 979 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 CTHP32929 405 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 COPS2P61201 443 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 PDXDC2PQ6P474 469 aa6.82□□□□□ -1.32
RNU6-28P-201ENST00000362378 LMOD1P29536 600 aaPredicted RBP6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 TBC1D9Q6ZT07 1266 aa6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 KCTD12Q96CX2 325 aaKnown RBP6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 PRDM9Q9NQV7 894 aa6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 MAFBQ9Y5Q3 323 aaPredicted RBP6.81□□□□□ -1.32
RNU6-28P-201ENST00000362378 ATP9BO43861 1147 aa6.8□□□□□ -1.32
RNU6-28P-201ENST00000362378 MCCD1P59942 119 aaPredicted RBP6.8□□□□□ -1.32
RNU6-28P-201ENST00000362378 PTK2Q05397 1052 aa6.8□□□□□ -1.32
RNU6-28P-201ENST00000362378 MTRQ99707 1265 aa6.8□□□□□ -1.32
RNU6-28P-201ENST00000362378 USTQ9Y2C2 406 aa6.8□□□□□ -1.32
RNU6-28P-201ENST00000362378 TLL1O43897 1013 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 TJAP1Q5JTD0 557 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 NBPF14Q5TI25 921 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 IL21Q9HBE4 155 aa6.79□□□□□ -1.32
RNU6-28P-201ENST00000362378 ATG7O95352 703 aa6.78□□□□□ -1.32
RNU6-28P-201ENST00000362378 CSB-PGBD3P0DP91 1061 aa6.78□□□□□ -1.32
RNU6-28P-201ENST00000362378 PIK3CDO00329 1044 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 KANK4Q5T7N3 995 aaPredicted RBP6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 PTCRAQ6ISU1 281 aaPredicted RBP6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 PLEKHM2Q8IWE5 1019 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 PHTF2Q8N3S3 785 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 ZNF516Q92618 1163 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 SLC6A16Q9GZN6 736 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 UNC93B1Q9H1C4 597 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 CEP126Q9P2H0 1117 aa6.76□□□□□ -1.33
RNU6-28P-201ENST00000362378 SH3BP5LQ7L8J4 393 aa6.75□□□□□ -1.33
RNU6-28P-201ENST00000362378 AEBP1Q8IUX7 1158 aa6.75□□□□□ -1.33
RNU6-28P-201ENST00000362378 VRTNQ9H8Y1 702 aa6.75□□□□□ -1.33
RNU6-28P-201ENST00000362378 USP17L3A6NCW0 530 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 USP17L4A6NCW7 530 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 SKIP12755 728 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 PTPN5P54829 565 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 ELOAQ14241 798 aaKnown RBP6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 USP17L2Q6R6M4 530 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 USP17L1Q7RTZ2 530 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 FAM174AQ8TBP5 190 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 ADAM32Q8TC27 787 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 ARHGAP9Q9BRR9 750 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 CHIC2Q9UKJ5 165 aa6.74□□□□□ -1.33
RNU6-28P-201ENST00000362378 TMEM88BA6NKF7 163 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 USP17L5A8MUK1 530 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 PATL2C9JE40 543 aaKnown RBP6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 LZTS3O60299 673 aaPredicted RBP6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 BRD1O95696 1058 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 CDCA8Q53HL2 280 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 SH3RF1Q7Z6J0 888 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 CCDC24Q8N4L8 307 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 PCDHB9Q9Y5E1 797 aa6.73□□□□□ -1.33
RNU6-28P-201ENST00000362378 SLFNL1Q499Z3 407 aa6.72□□□□□ -1.33
RNU6-28P-201ENST00000362378 S1PR4O95977 384 aa6.71□□□□□ -1.34
RNU6-28P-201ENST00000362378 KCNA1Q09470 495 aa6.71□□□□□ -1.34
RNU6-28P-201ENST00000362378 ZBTB33Q86T24 672 aa6.71□□□□□ -1.34
RNU6-28P-201ENST00000362378 RNF135Q8IUD6 432 aa6.71□□□□□ -1.34
RNU6-28P-201ENST00000362378 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
RNU6-28P-201ENST00000362378 MAP7D1Q3KQU3 841 aa6.7□□□□□ -1.34
RNU6-28P-201ENST00000362378 BPHLQ86WA6 291 aaPredicted RBP6.7□□□□□ -1.34
RNU6-28P-201ENST00000362378 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
RNU6-28P-201ENST00000362378 NKX2-3Q8TAU0 364 aa6.7□□□□□ -1.34
RNU6-28P-201ENST00000362378 BAP1Q92560 729 aa6.7□□□□□ -1.34
RNU6-28P-201ENST00000362378 FAM196BA6NMK8 535 aa6.69□□□□□ -1.34
RNU6-28P-201ENST00000362378 TRAF7Q6Q0C0 670 aa6.69□□□□□ -1.34
RNU6-28P-201ENST00000362378 DZIP3Q86Y13 1208 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms