RNA–Protein interactions for RNA: ENST00000362025.9

RAB3IP-202, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-202ENST00000362025 SIN3AQ96ST3 1273 aa24.41■■□□□ 1.5
RAB3IP-202ENST00000362025 CCDC125Q86Z20 511 aa24.41■■□□□ 1.5
RAB3IP-202ENST00000362025 ACEP12821 1306 aa24.4■■□□□ 1.5
RAB3IP-202ENST00000362025 ONECUT3O60422 494 aaPredicted RBP24.39■■□□□ 1.5
RAB3IP-202ENST00000362025 CENPJQ9HC77 1338 aaPredicted RBP24.39■■□□□ 1.49
RAB3IP-202ENST00000362025 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
RAB3IP-202ENST00000362025 POLR3AO14802 1390 aaPredicted RBP24.39■■□□□ 1.49
RAB3IP-202ENST00000362025 NUTM2GQ5VZR2 741 aa24.38■■□□□ 1.49
RAB3IP-202ENST00000362025 PLEKHG3A1L390 1219 aa24.38■■□□□ 1.49
RAB3IP-202ENST00000362025 PRDM11Q9NQV5 511 aa24.38■■□□□ 1.49
RAB3IP-202ENST00000362025 SRPK2P78362 688 aaKnown RBP24.37■■□□□ 1.49
RAB3IP-202ENST00000362025 COL14A1Q05707 1796 aaKnown RBP24.37■■□□□ 1.49
RAB3IP-202ENST00000362025 A0A0G2JS52 829 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 MYT1Q01538 1121 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 NEUROD1Q13562 356 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 NRAPQ86VF7 1730 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 TOPAZ1Q8N9V7 1692 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 CRYBG1Q9Y4K1 1723 aa24.36■■□□□ 1.49
RAB3IP-202ENST00000362025 BRWD3Q6RI45 1802 aa24.35■■□□□ 1.49
RAB3IP-202ENST00000362025 EP400Q96L91 3159 aa24.35■■□□□ 1.49
RAB3IP-202ENST00000362025 FAM98CQ17RN3 349 aaKnown RBP24.35■■□□□ 1.49
RAB3IP-202ENST00000362025 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
RAB3IP-202ENST00000362025 KRT27Q7Z3Y8 459 aa24.34■■□□□ 1.49
RAB3IP-202ENST00000362025 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
RAB3IP-202ENST00000362025 BLMP54132 1417 aaPredicted RBP24.33■■□□□ 1.49
RAB3IP-202ENST00000362025 CHRNA2Q15822 529 aa24.33■■□□□ 1.48
RAB3IP-202ENST00000362025 ZC3H6P61129 1189 aaKnown RBP24.31■■□□□ 1.48
RAB3IP-202ENST00000362025 PPIP5K1Q6PFW1 1433 aa24.31■■□□□ 1.48
RAB3IP-202ENST00000362025 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
RAB3IP-202ENST00000362025 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
RAB3IP-202ENST00000362025 ABTB2Q8N961 1025 aa24.3■■□□□ 1.48
RAB3IP-202ENST00000362025 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
RAB3IP-202ENST00000362025 DEFB132Q7Z7B7 95 aa24.28■■□□□ 1.48
RAB3IP-202ENST00000362025 QRICH2Q9H0J4 1663 aa24.28■■□□□ 1.48
RAB3IP-202ENST00000362025 PHRF1Q9P1Y6 1649 aaKnown RBP24.28■■□□□ 1.48
RAB3IP-202ENST00000362025 SF3B2Q13435 895 aaKnown RBP24.27■■□□□ 1.48
RAB3IP-202ENST00000362025 STRN4Q9NRL3 753 aa24.27■■□□□ 1.48
RAB3IP-202ENST00000362025 CABP1Q9NZU7 370 aa24.26■■□□□ 1.47
RAB3IP-202ENST00000362025 ROCK2O75116 1388 aaKnown RBP24.26■■□□□ 1.47
RAB3IP-202ENST00000362025 TRPM1Q7Z4N2 1603 aa24.25■■□□□ 1.47
RAB3IP-202ENST00000362025 USP19O94966 1318 aa24.24■■□□□ 1.47
RAB3IP-202ENST00000362025 SPATA31A1Q5TZJ5 1347 aa24.23■■□□□ 1.47
RAB3IP-202ENST00000362025 FAM182BQ5T319 152 aa24.23■■□□□ 1.47
RAB3IP-202ENST00000362025 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
RAB3IP-202ENST00000362025 NLRP13Q86W25 1043 aa24.22■■□□□ 1.47
RAB3IP-202ENST00000362025 NRKQ7Z2Y5 1582 aa24.21■■□□□ 1.47
RAB3IP-202ENST00000362025 EVA1CP58658 441 aa24.2■■□□□ 1.47
RAB3IP-202ENST00000362025 CPDO75976 1380 aa24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 GCP02774 474 aa24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 USP35Q9P2H5 1018 aa24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 USP6P35125 1406 aa24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 BRD4O60885 1362 aaPredicted RBP24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 THSD7AQ9UPZ6 1657 aa24.19■■□□□ 1.46
RAB3IP-202ENST00000362025 SSH2Q76I76 1423 aa24.17■■□□□ 1.46
RAB3IP-202ENST00000362025 CAMTA1Q9Y6Y1 1673 aa24.17■■□□□ 1.46
RAB3IP-202ENST00000362025 NLRP6P59044 892 aa24.16■■□□□ 1.46
RAB3IP-202ENST00000362025 LARP1Q6PKG0 1096 aaKnown RBP24.16■■□□□ 1.46
RAB3IP-202ENST00000362025 PCGF6Q9BYE7 350 aa24.15■■□□□ 1.46
RAB3IP-202ENST00000362025 BAG6P46379 1132 aa24.15■■□□□ 1.46
RAB3IP-202ENST00000362025 ZBTB7CA1YPR0 619 aa24.14■■□□□ 1.46
RAB3IP-202ENST00000362025 LMO7Q8WWI1 1683 aa24.13■■□□□ 1.45
RAB3IP-202ENST00000362025 BARGINQ6ZT62 677 aa24.12■■□□□ 1.45
RAB3IP-202ENST00000362025 TCP11L2Q8N4U5 519 aa24.11■■□□□ 1.45
RAB3IP-202ENST00000362025 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
RAB3IP-202ENST00000362025 CARD11Q9BXL7 1154 aa24.09■■□□□ 1.45
RAB3IP-202ENST00000362025 ZNF692Q9BU19 519 aaPredicted RBP24.09■■□□□ 1.45
RAB3IP-202ENST00000362025 SLIT3O75094 1523 aa24.08■■□□□ 1.45
RAB3IP-202ENST00000362025 TTC21BQ7Z4L5 1316 aa24.08■■□□□ 1.45
RAB3IP-202ENST00000362025 COL5A2P05997 1499 aaPredicted RBP24.08■■□□□ 1.45
RAB3IP-202ENST00000362025 TONSLQ96HA7 1378 aa24.08■■□□□ 1.45
RAB3IP-202ENST00000362025 FAM196AQ6ZSG2 479 aa24.07■■□□□ 1.44
RAB3IP-202ENST00000362025 PIK3C2AO00443 1686 aa24.07■■□□□ 1.44
RAB3IP-202ENST00000362025 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
RAB3IP-202ENST00000362025 PDE3BQ13370 1112 aa24.07■■□□□ 1.44
RAB3IP-202ENST00000362025 SRCAPQ6ZRS2 3230 aa24.06■■□□□ 1.44
RAB3IP-202ENST00000362025 AATKQ6ZMQ8 1374 aa24.06■■□□□ 1.44
RAB3IP-202ENST00000362025 RGPD1P0DJD0 1748 aa24.06■■□□□ 1.44
RAB3IP-202ENST00000362025 TRIM37O94972 964 aa24.06■■□□□ 1.44
RAB3IP-202ENST00000362025 THRAP3Q9Y2W1 955 aaKnown RBP24.04■■□□□ 1.44
RAB3IP-202ENST00000362025 CPSF1Q10570 1443 aaKnown RBP24.04■■□□□ 1.44
RAB3IP-202ENST00000362025 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
RAB3IP-202ENST00000362025 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
RAB3IP-202ENST00000362025 PSDA5PKW4 1024 aaPredicted RBP24.03■■□□□ 1.44
RAB3IP-202ENST00000362025 SOX12O15370 315 aa24.03■■□□□ 1.44
RAB3IP-202ENST00000362025 CRB1P82279 1406 aa24.03■■□□□ 1.44
RAB3IP-202ENST00000362025 TTC21AQ8NDW8 1320 aa24.02■■□□□ 1.44
RAB3IP-202ENST00000362025 DISP2A7MBM2 1401 aa24.01■■□□□ 1.43
RAB3IP-202ENST00000362025 AXIN2Q9Y2T1 843 aa24.01■■□□□ 1.43
RAB3IP-202ENST00000362025 AKAP12Q02952 1782 aa24.01■■□□□ 1.43
RAB3IP-202ENST00000362025 TNS1Q9HBL0 1735 aaKnown RBP24.01■■□□□ 1.43
RAB3IP-202ENST00000362025 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
RAB3IP-202ENST00000362025 ARHGEF25Q86VW2 580 aa23.99■■□□□ 1.43
RAB3IP-202ENST00000362025 KCNH5Q8NCM2 988 aa23.99■■□□□ 1.43
RAB3IP-202ENST00000362025 APBA3O96018 575 aa23.99■■□□□ 1.43
RAB3IP-202ENST00000362025 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
RAB3IP-202ENST00000362025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.98■■□□□ 1.43
RAB3IP-202ENST00000362025 TMC1Q8TDI8 760 aa23.98■■□□□ 1.43
RAB3IP-202ENST00000362025 CAMKK2Q96RR4 588 aa23.98■■□□□ 1.43
RAB3IP-202ENST00000362025 COL18A1P39060 1754 aa23.97■■□□□ 1.43
RAB3IP-202ENST00000362025 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms