RNA–Protein interactions for RNA: ENST00000361726.6

GJB1-201, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-201ENST00000361726 WDR43Q15061 677 aaKnown RBP eCLIP18.84■□□□□ 0.61
GJB1-201ENST00000361726 PIK3C2AO00443 1686 aa18.84■□□□□ 0.61
GJB1-201ENST00000361726 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
GJB1-201ENST00000361726 MTHFSP49914 203 aa18.83■□□□□ 0.61
GJB1-201ENST00000361726 NGDNQ8NEJ9 315 aaKnown RBP18.83■□□□□ 0.61
GJB1-201ENST00000361726 ZRANB1Q9UGI0 708 aa18.83■□□□□ 0.61
GJB1-201ENST00000361726 TTC21BQ7Z4L5 1316 aa18.83■□□□□ 0.6
GJB1-201ENST00000361726 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
GJB1-201ENST00000361726 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
GJB1-201ENST00000361726 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
GJB1-201ENST00000361726 MARF1Q9Y4F3 1742 aaKnown RBP18.81■□□□□ 0.6
GJB1-201ENST00000361726 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
GJB1-201ENST00000361726 KIF1AQ12756 1690 aa18.8■□□□□ 0.6
GJB1-201ENST00000361726 USP54Q70EL1 1684 aa18.8■□□□□ 0.6
GJB1-201ENST00000361726 OVOS2A0A0J9YW53 1432 aa18.79■□□□□ 0.6
GJB1-201ENST00000361726 OVOS2Q6IE36 1432 aa18.79■□□□□ 0.6
GJB1-201ENST00000361726 COG3Q96JB2 828 aa18.79■□□□□ 0.6
GJB1-201ENST00000361726 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
GJB1-201ENST00000361726 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
GJB1-201ENST00000361726 SCAF1Q9H7N4 1312 aaKnown RBP18.78■□□□□ 0.6
GJB1-201ENST00000361726 PHF8Q9UPP1 1060 aa18.78■□□□□ 0.6
GJB1-201ENST00000361726 TTC21AQ8NDW8 1320 aa18.78■□□□□ 0.6
GJB1-201ENST00000361726 PELP1Q8IZL8 1130 aaKnown RBP18.78■□□□□ 0.6
GJB1-201ENST00000361726 C19orf44Q9H6X5 657 aa18.78■□□□□ 0.6
GJB1-201ENST00000361726 DCCP43146 1447 aa18.77■□□□□ 0.59
GJB1-201ENST00000361726 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
GJB1-201ENST00000361726 SMG6Q86US8 1419 aaKnown RBP18.76■□□□□ 0.59
GJB1-201ENST00000361726 C1orf167Q5SNV9 1468 aa18.75■□□□□ 0.59
GJB1-201ENST00000361726 FBLN1P23142 703 aa18.75■□□□□ 0.59
GJB1-201ENST00000361726 AATKQ6ZMQ8 1374 aa18.75■□□□□ 0.59
GJB1-201ENST00000361726 LRRC7Q96NW7 1537 aa18.75■□□□□ 0.59
GJB1-201ENST00000361726 ZNF335Q9H4Z2 1342 aaPredicted RBP18.75■□□□□ 0.59
GJB1-201ENST00000361726 MST1RQ04912 1400 aa18.74■□□□□ 0.59
GJB1-201ENST00000361726 POLKQ9UBT6 870 aa18.74■□□□□ 0.59
GJB1-201ENST00000361726 CDK12Q9NYV4 1490 aaPredicted RBP18.73■□□□□ 0.59
GJB1-201ENST00000361726 TRPM3Q9HCF6 1732 aaPredicted RBP18.73■□□□□ 0.59
GJB1-201ENST00000361726 ATF3P18847 181 aa18.72■□□□□ 0.59
GJB1-201ENST00000361726 ORAI2Q96SN7 254 aa18.72■□□□□ 0.59
GJB1-201ENST00000361726 PEAK1Q9H792 1746 aa18.72■□□□□ 0.59
GJB1-201ENST00000361726 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
GJB1-201ENST00000361726 CCDC146Q8IYE0 955 aa18.71■□□□□ 0.59
GJB1-201ENST00000361726 MSH6P52701 1360 aa18.71■□□□□ 0.59
GJB1-201ENST00000361726 USP31Q70CQ4 1352 aa18.71■□□□□ 0.59
GJB1-201ENST00000361726 SALL2Q9Y467 1007 aaPredicted RBP18.71■□□□□ 0.58
GJB1-201ENST00000361726 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.58
GJB1-201ENST00000361726 PPM1GO15355 546 aaPredicted RBP18.7■□□□□ 0.58
GJB1-201ENST00000361726 RRS1Q15050 365 aaKnown RBP18.69■□□□□ 0.58
GJB1-201ENST00000361726 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
GJB1-201ENST00000361726 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
GJB1-201ENST00000361726 PSME1Q06323 249 aa18.67■□□□□ 0.58
GJB1-201ENST00000361726 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
GJB1-201ENST00000361726 LTN1O94822 1766 aa18.67■□□□□ 0.58
GJB1-201ENST00000361726 DIAPH1O60610 1272 aaKnown RBP18.67■□□□□ 0.58
GJB1-201ENST00000361726 CADPS2Q86UW7 1296 aa18.67■□□□□ 0.58
GJB1-201ENST00000361726 U2AF1L5P0DN76 240 aaPredicted RBP18.66■□□□□ 0.58
GJB1-201ENST00000361726 U2AF1Q01081 240 aaKnown RBP eCLIP18.66■□□□□ 0.58
GJB1-201ENST00000361726 NUTM2GQ5VZR2 741 aa18.66■□□□□ 0.58
GJB1-201ENST00000361726 NUDCQ9Y266 331 aa18.66■□□□□ 0.58
GJB1-201ENST00000361726 IQSEC2Q5JU85 1478 aa18.66■□□□□ 0.58
GJB1-201ENST00000361726 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
GJB1-201ENST00000361726 U2SURPO15042 1029 aaKnown RBP18.65■□□□□ 0.58
GJB1-201ENST00000361726 SOX12O15370 315 aa18.65■□□□□ 0.58
GJB1-201ENST00000361726 FOXO3O43524 673 aa18.65■□□□□ 0.58
GJB1-201ENST00000361726 NLRP6P59044 892 aa18.65■□□□□ 0.58
GJB1-201ENST00000361726 ABTB2Q8N961 1025 aa18.65■□□□□ 0.58
GJB1-201ENST00000361726 XPCQ01831 940 aaPredicted RBP18.64■□□□□ 0.57
GJB1-201ENST00000361726 APAF1O14727 1248 aa18.63■□□□□ 0.57
GJB1-201ENST00000361726 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
GJB1-201ENST00000361726 NFAT5O94916 1531 aa18.61■□□□□ 0.57
GJB1-201ENST00000361726 RGPD1P0DJD0 1748 aa18.61■□□□□ 0.57
GJB1-201ENST00000361726 KRT28Q7Z3Y7 464 aa18.6■□□□□ 0.57
GJB1-201ENST00000361726 MAP3K19Q56UN5 1328 aa18.6■□□□□ 0.57
GJB1-201ENST00000361726 IL13P35225 146 aa18.6■□□□□ 0.57
GJB1-201ENST00000361726 PDE3BQ13370 1112 aa18.59■□□□□ 0.57
GJB1-201ENST00000361726 SLIT3O75094 1523 aa18.58■□□□□ 0.57
GJB1-201ENST00000361726 SBNO1A3KN83 1393 aa18.58■□□□□ 0.57
GJB1-201ENST00000361726 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
GJB1-201ENST00000361726 TCP11L2Q8N4U5 519 aa18.57■□□□□ 0.56
GJB1-201ENST00000361726 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
GJB1-201ENST00000361726 PXDNQ92626 1479 aa18.57■□□□□ 0.56
GJB1-201ENST00000361726 FLT4P35916 1363 aa18.57■□□□□ 0.56
GJB1-201ENST00000361726 PHRF1Q9P1Y6 1649 aaKnown RBP18.57■□□□□ 0.56
GJB1-201ENST00000361726 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
GJB1-201ENST00000361726 PLEKHF1Q96S99 279 aa18.56■□□□□ 0.56
GJB1-201ENST00000361726 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
GJB1-201ENST00000361726 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 EIF4A2Q14240 407 aaKnown RBP18.55■□□□□ 0.56
GJB1-201ENST00000361726 HSP90AB2PQ58FF8 381 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 DLG5Q8TDM6 1919 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 CRYBG1Q9Y4K1 1723 aa18.55■□□□□ 0.56
GJB1-201ENST00000361726 AMPHP49418 695 aa18.54■□□□□ 0.56
GJB1-201ENST00000361726 LMOD2Q6P5Q4 547 aa18.54■□□□□ 0.56
GJB1-201ENST00000361726 BRINP3Q76B58 766 aa18.54■□□□□ 0.56
GJB1-201ENST00000361726 RSPH6AQ9H0K4 717 aa18.54■□□□□ 0.56
GJB1-201ENST00000361726 NHSL1Q5SYE7 1610 aa18.54■□□□□ 0.56
GJB1-201ENST00000361726 MED1Q15648 1581 aaPredicted RBP18.53■□□□□ 0.56
GJB1-201ENST00000361726 HMOX1P09601 288 aa18.53■□□□□ 0.56
GJB1-201ENST00000361726 SUPT16HQ9Y5B9 1047 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms