RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 RASSF4Q9H2L5 321 aa14.1□□□□□ -0.15
CNOT4-203ENST00000361528 FAM135AQ9P2D6 1515 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 REC8O95072 547 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 CYP2C19P33261 490 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 GPT2Q8TD30 523 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 CWC22Q9HCG8 908 aaKnown RBP14.09□□□□□ -0.15
CNOT4-203ENST00000361528 SYCE3A1L190 88 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 LMOD3Q0VAK6 560 aa14.09□□□□□ -0.15
CNOT4-203ENST00000361528 SYAP1Q96A49 352 aaPredicted RBP14.09□□□□□ -0.15
CNOT4-203ENST00000361528 PHF14O94880 888 aa14.08□□□□□ -0.16
CNOT4-203ENST00000361528 BRPF1P55201 1214 aaPredicted RBP14.08□□□□□ -0.16
CNOT4-203ENST00000361528 RAD51AP2Q09MP3 1159 aa14.08□□□□□ -0.16
CNOT4-203ENST00000361528 SMC4Q9NTJ3 1288 aa14.08□□□□□ -0.16
CNOT4-203ENST00000361528 MUM1L1Q5H9M0 696 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 GAS2L2Q8NHY3 880 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 KIAA1524Q8TCG1 905 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 KIF2CQ99661 725 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 TMEM63CQ9P1W3 806 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 RSPH14Q9UHP6 348 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 PZPP20742 1482 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 GRIPAP1Q4V328 841 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 ICE2Q659A1 982 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 SLC26A8Q96RN1 970 aa14.07□□□□□ -0.16
CNOT4-203ENST00000361528 LOC102724159A0A0B4J2E5 919 aa14.06□□□□□ -0.16
CNOT4-203ENST00000361528 SMTNL1A8MU46 457 aa14.06□□□□□ -0.16
CNOT4-203ENST00000361528 DHX16O60231 1041 aaKnown RBP14.06□□□□□ -0.16
CNOT4-203ENST00000361528 PWP2Q15269 919 aaKnown RBP14.06□□□□□ -0.16
CNOT4-203ENST00000361528 CARD10Q9BWT7 1032 aa14.06□□□□□ -0.16
CNOT4-203ENST00000361528 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
CNOT4-203ENST00000361528 COL17A1Q9UMD9 1497 aaPredicted RBP14.06□□□□□ -0.16
CNOT4-203ENST00000361528 GOLGA6L6A8MZA4 724 aa14.06□□□□□ -0.16
CNOT4-203ENST00000361528 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
CNOT4-203ENST00000361528 ERICH4A6NGS2 130 aa14.05□□□□□ -0.16
CNOT4-203ENST00000361528 HNRNPH2P55795 449 aaKnown RBP14.05□□□□□ -0.16
CNOT4-203ENST00000361528 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
CNOT4-203ENST00000361528 ZNF397Q8NF99 534 aaPredicted RBP14.05□□□□□ -0.16
CNOT4-203ENST00000361528 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
CNOT4-203ENST00000361528 PRPF40AO75400 957 aaKnown RBP14.05□□□□□ -0.16
CNOT4-203ENST00000361528 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
CNOT4-203ENST00000361528 RBM27Q9P2N5 1060 aaKnown RBP14.05□□□□□ -0.16
CNOT4-203ENST00000361528 LRRIQ1Q96JM4 1722 aa14.04□□□□□ -0.16
CNOT4-203ENST00000361528 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
CNOT4-203ENST00000361528 CEP83Q9Y592 693 aa14.04□□□□□ -0.16
CNOT4-203ENST00000361528 PAXBP1Q9Y5B6 917 aa14.04□□□□□ -0.16
CNOT4-203ENST00000361528 GUCY2CP25092 1073 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 PIK3C2GO75747 1445 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 GRIN2AQ12879 1464 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 SCAF11Q99590 1463 aaKnown RBP14.03□□□□□ -0.16
CNOT4-203ENST00000361528 SLFNL1Q499Z3 407 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 RNF214Q8ND24 703 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 BANK1Q8NDB2 785 aa14.03□□□□□ -0.16
CNOT4-203ENST00000361528 TTC12Q9H892 705 aaPredicted RBP14.03□□□□□ -0.16
CNOT4-203ENST00000361528 CFAP65Q6ZU64 1925 aaKnown RBP14.02□□□□□ -0.16
CNOT4-203ENST00000361528 CHMP4CQ96CF2 233 aa14.02□□□□□ -0.16
CNOT4-203ENST00000361528 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.16
CNOT4-203ENST00000361528 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.16
CNOT4-203ENST00000361528 CD2BP2O95400 341 aaKnown RBP14.02□□□□□ -0.17
CNOT4-203ENST00000361528 CCDC172P0C7W6 258 aa14.02□□□□□ -0.17
CNOT4-203ENST00000361528 CASQ1P31415 396 aa14.02□□□□□ -0.17
CNOT4-203ENST00000361528 NOL10Q9BSC4 688 aaKnown RBP14.02□□□□□ -0.17
CNOT4-203ENST00000361528 TXLNBQ8N3L3 684 aa14.01□□□□□ -0.17
CNOT4-203ENST00000361528 ZBTB9Q96C00 473 aa14.01□□□□□ -0.17
CNOT4-203ENST00000361528 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14□□□□□ -0.17
CNOT4-203ENST00000361528 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
CNOT4-203ENST00000361528 GOLGA6L1Q8N7Z2 621 aa14□□□□□ -0.17
CNOT4-203ENST00000361528 LAMC1P11047 1609 aa14□□□□□ -0.17
CNOT4-203ENST00000361528 ZBTB7CA1YPR0 619 aa14□□□□□ -0.17
CNOT4-203ENST00000361528 RABEP1Q15276 862 aa14□□□□□ -0.17
CNOT4-203ENST00000361528 DAPK1P53355 1430 aa14□□□□□ -0.17
CNOT4-203ENST00000361528 ADCY5O95622 1261 aa13.99□□□□□ -0.17
CNOT4-203ENST00000361528 PPP2R1AP30153 589 aa13.99□□□□□ -0.17
CNOT4-203ENST00000361528 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
CNOT4-203ENST00000361528 C17orf53Q8N3J3 647 aaPredicted RBP13.99□□□□□ -0.17
CNOT4-203ENST00000361528 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.99□□□□□ -0.17
CNOT4-203ENST00000361528 DNMT1P26358 1616 aaKnown RBP13.99□□□□□ -0.17
CNOT4-203ENST00000361528 FANCD2Q9BXW9 1451 aa13.99□□□□□ -0.17
CNOT4-203ENST00000361528 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
CNOT4-203ENST00000361528 KIF1CO43896 1103 aaKnown RBP13.98□□□□□ -0.17
CNOT4-203ENST00000361528 RARSP54136 660 aaKnown RBP13.98□□□□□ -0.17
CNOT4-203ENST00000361528 RNF20Q5VTR2 975 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 CFAP44Q96MT7 982 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 USP25Q9UHP3 1055 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 REREQ9P2R6 1566 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 CEP170Q5SW79 1584 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 SATB1Q01826 763 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 MVPQ14764 893 aaKnown RBP13.98□□□□□ -0.17
CNOT4-203ENST00000361528 TEX35Q5T0J7 233 aa13.98□□□□□ -0.17
CNOT4-203ENST00000361528 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
CNOT4-203ENST00000361528 CCDC112Q8NEF3 446 aa13.97□□□□□ -0.17
CNOT4-203ENST00000361528 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
CNOT4-203ENST00000361528 MCCP23508 829 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 BMS1Q14692 1282 aaKnown RBP13.96□□□□□ -0.17
CNOT4-203ENST00000361528 KDM5DQ9BY66 1539 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 NBPF20Q3BBV1 942 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 EGFL6Q8IUX8 553 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 MNS1Q8NEH6 495 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 LAMC3Q9Y6N6 1575 aa13.96□□□□□ -0.17
CNOT4-203ENST00000361528 SYNMO15061 1565 aa13.95□□□□□ -0.18
CNOT4-203ENST00000361528 CT47A1Q5JQC4 288 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms