RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 RRS1Q15050 365 aaKnown RBP20.6■□□□□ 0.89
COL4A2-201ENST00000360467 CDCA7LQ96GN5 454 aa20.6■□□□□ 0.89
COL4A2-201ENST00000360467 TCP11L2Q8N4U5 519 aa20.59■□□□□ 0.89
COL4A2-201ENST00000360467 C22orf23Q9BZE7 217 aa20.59■□□□□ 0.89
COL4A2-201ENST00000360467 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
COL4A2-201ENST00000360467 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
COL4A2-201ENST00000360467 RAPGEF3O95398 923 aa20.59■□□□□ 0.89
COL4A2-201ENST00000360467 SLC4A2P04920 1241 aa20.58■□□□□ 0.89
COL4A2-201ENST00000360467 NBPF1Q3BBV0 1214 aa20.58■□□□□ 0.89
COL4A2-201ENST00000360467 XBP1P17861 261 aa20.58■□□□□ 0.88
COL4A2-201ENST00000360467 SKIDA1Q1XH10 827 aa20.58■□□□□ 0.88
COL4A2-201ENST00000360467 TWISTNBQ3B726 338 aaPredicted RBP20.58■□□□□ 0.88
COL4A2-201ENST00000360467 CLASRPQ8N2M8 674 aaKnown RBP20.58■□□□□ 0.88
COL4A2-201ENST00000360467 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
COL4A2-201ENST00000360467 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
COL4A2-201ENST00000360467 CDC45O75419 566 aa20.57■□□□□ 0.88
COL4A2-201ENST00000360467 SLC12A5Q9H2X9 1139 aa20.57■□□□□ 0.88
COL4A2-201ENST00000360467 SART3Q15020 963 aaKnown RBP20.57■□□□□ 0.88
COL4A2-201ENST00000360467 CCDC158Q5M9N0 1113 aa20.57■□□□□ 0.88
COL4A2-201ENST00000360467 ZNF530Q6P9A1 599 aaPredicted RBP20.57■□□□□ 0.88
COL4A2-201ENST00000360467 ZC3H6P61129 1189 aaKnown RBP20.56■□□□□ 0.88
COL4A2-201ENST00000360467 OLFM4Q6UX06 510 aa20.56■□□□□ 0.88
COL4A2-201ENST00000360467 BRPF1P55201 1214 aaPredicted RBP20.56■□□□□ 0.88
COL4A2-201ENST00000360467 WASHC2AQ641Q2 1341 aa20.56■□□□□ 0.88
COL4A2-201ENST00000360467 PIBF1Q8WXW3 757 aa20.55■□□□□ 0.88
COL4A2-201ENST00000360467 NCOA2Q15596 1464 aa20.55■□□□□ 0.88
COL4A2-201ENST00000360467 HDGFL1Q5TGJ6 251 aa20.55■□□□□ 0.88
COL4A2-201ENST00000360467 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
COL4A2-201ENST00000360467 RRBP1Q9P2E9 1410 aaKnown RBP20.55■□□□□ 0.88
COL4A2-201ENST00000360467 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
COL4A2-201ENST00000360467 SLC3A2P08195 630 aaKnown RBP20.54■□□□□ 0.88
COL4A2-201ENST00000360467 FYCO1Q9BQS8 1478 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 GSE1Q14687 1217 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 ZSCAN29Q8IWY8 852 aaPredicted RBP20.54■□□□□ 0.88
COL4A2-201ENST00000360467 PAF1Q8N7H5 531 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 PSMA5P28066 241 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 SCAPERQ9BY12 1400 aa20.54■□□□□ 0.88
COL4A2-201ENST00000360467 OFD1O75665 1012 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 IFT57Q9NWB7 429 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 FKBP4Q02790 459 aaKnown RBP eCLIP20.53■□□□□ 0.88
COL4A2-201ENST00000360467 ZHX3Q9H4I2 956 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 WWC2Q6AWC2 1192 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 PRDM11Q9NQV5 511 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 SPG7Q9UQ90 795 aa20.53■□□□□ 0.88
COL4A2-201ENST00000360467 NUP133Q8WUM0 1156 aa20.52■□□□□ 0.88
COL4A2-201ENST00000360467 GNL3LQ9NVN8 582 aaKnown RBP20.52■□□□□ 0.88
COL4A2-201ENST00000360467 FMNL2Q96PY5 1086 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 CHMP5Q9NZZ3 219 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 RNF214Q8ND24 703 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 BTBD11A6QL63 1104 aa20.51■□□□□ 0.87
COL4A2-201ENST00000360467 GNAI2P04899 355 aa20.5■□□□□ 0.87
COL4A2-201ENST00000360467 GNAI3P08754 354 aa20.5■□□□□ 0.87
COL4A2-201ENST00000360467 ANKLE2Q86XL3 938 aa20.5■□□□□ 0.87
COL4A2-201ENST00000360467 MIS18AQ9NYP9 233 aa20.5■□□□□ 0.87
COL4A2-201ENST00000360467 SYNJ2O15056 1496 aa20.5■□□□□ 0.87
COL4A2-201ENST00000360467 SETQ01105 290 aaPredicted RBP20.49■□□□□ 0.87
COL4A2-201ENST00000360467 GPS2Q13227 327 aa20.49■□□□□ 0.87
COL4A2-201ENST00000360467 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.49■□□□□ 0.87
COL4A2-201ENST00000360467 ADAMTS2O95450 1211 aa20.49■□□□□ 0.87
COL4A2-201ENST00000360467 NESP48681 1621 aa20.48■□□□□ 0.87
COL4A2-201ENST00000360467 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
COL4A2-201ENST00000360467 BCAR3O75815 825 aa20.48■□□□□ 0.87
COL4A2-201ENST00000360467 CAGE1Q8TC20 777 aa20.48■□□□□ 0.87
COL4A2-201ENST00000360467 RTEL1-TNFRSF6BF6WH68 1400 aa20.47■□□□□ 0.87
COL4A2-201ENST00000360467 SMC2O95347 1197 aa20.47■□□□□ 0.87
COL4A2-201ENST00000360467 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
COL4A2-201ENST00000360467 ZNF219Q9P2Y4 722 aaPredicted RBP20.47■□□□□ 0.87
COL4A2-201ENST00000360467 CHMP4BP1P59074 171 aa20.47■□□□□ 0.87
COL4A2-201ENST00000360467 NEK4P51957 841 aa20.47■□□□□ 0.87
COL4A2-201ENST00000360467 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.46■□□□□ 0.87
COL4A2-201ENST00000360467 ZNF771Q7L3S4 317 aaPredicted RBP20.46■□□□□ 0.87
COL4A2-201ENST00000360467 CFTRP13569 1480 aa20.46■□□□□ 0.87
COL4A2-201ENST00000360467 RUFY1Q96T51 708 aa20.46■□□□□ 0.87
COL4A2-201ENST00000360467 CCDC69A6NI79 296 aa20.45■□□□□ 0.87
COL4A2-201ENST00000360467 NUCB2P80303 420 aa20.45■□□□□ 0.87
COL4A2-201ENST00000360467 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.87
COL4A2-201ENST00000360467 MPHOSPH10O00566 681 aaKnown RBP20.45■□□□□ 0.86
COL4A2-201ENST00000360467 PDZRN3Q9UPQ7 1066 aa20.45■□□□□ 0.86
COL4A2-201ENST00000360467 RAI14Q9P0K7 980 aa20.44■□□□□ 0.86
COL4A2-201ENST00000360467 KIF21BO75037 1637 aa20.44■□□□□ 0.86
COL4A2-201ENST00000360467 GRIN2BQ13224 1484 aa20.44■□□□□ 0.86
COL4A2-201ENST00000360467 AACSQ86V21 672 aa20.43■□□□□ 0.86
COL4A2-201ENST00000360467 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
COL4A2-201ENST00000360467 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
COL4A2-201ENST00000360467 MAGEC2Q9UBF1 373 aaPredicted RBP20.42■□□□□ 0.86
COL4A2-201ENST00000360467 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
COL4A2-201ENST00000360467 MNS1Q8NEH6 495 aa20.42■□□□□ 0.86
COL4A2-201ENST00000360467 HSP90AA2PQ14568 343 aaPredicted RBP20.41■□□□□ 0.86
COL4A2-201ENST00000360467 MATR3P43243 847 aaKnown RBP eCLIP20.41■□□□□ 0.86
COL4A2-201ENST00000360467 NAT10Q9H0A0 1025 aaKnown RBP20.41■□□□□ 0.86
COL4A2-201ENST00000360467 FIBPO43427 364 aa20.41■□□□□ 0.86
COL4A2-201ENST00000360467 FAM13BQ9NYF5 915 aa20.41■□□□□ 0.86
COL4A2-201ENST00000360467 USP5P45974 858 aa20.4■□□□□ 0.86
COL4A2-201ENST00000360467 LRRCC1Q9C099 1032 aa20.4■□□□□ 0.86
COL4A2-201ENST00000360467 C9orf84Q5VXU9 1444 aa20.4■□□□□ 0.86
COL4A2-201ENST00000360467 TXLNAP40222 546 aa20.4■□□□□ 0.86
COL4A2-201ENST00000360467 CAVIN1Q6NZI2 390 aaKnown RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms