RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 BLMP54132 1417 aaPredicted RBP26.77■■□□□ 1.88
CBWD3-201ENST00000360171 RCAN3Q9UKA8 241 aa26.77■■□□□ 1.88
CBWD3-201ENST00000360171 NRKQ7Z2Y5 1582 aa26.75■■□□□ 1.87
CBWD3-201ENST00000360171 FYB1O15117 783 aa26.75■■□□□ 1.87
CBWD3-201ENST00000360171 GGNBP2Q9H3C7 697 aa26.75■■□□□ 1.87
CBWD3-201ENST00000360171 STRCQ7RTU9 1775 aa26.75■■□□□ 1.87
CBWD3-201ENST00000360171 EDC4Q6P2E9 1401 aaKnown RBP26.74■■□□□ 1.87
CBWD3-201ENST00000360171 TNNT2P45379 298 aaPredicted RBP26.74■■□□□ 1.87
CBWD3-201ENST00000360171 STRCP1A6NGW2 1772 aa26.74■■□□□ 1.87
CBWD3-201ENST00000360171 ANP32AP39687 249 aaKnown RBP26.74■■□□□ 1.87
CBWD3-201ENST00000360171 RBM33Q96EV2 1170 aaKnown RBP26.74■■□□□ 1.87
CBWD3-201ENST00000360171 IPO9Q96P70 1041 aaKnown RBP26.71■■□□□ 1.87
CBWD3-201ENST00000360171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.71■■□□□ 1.87
CBWD3-201ENST00000360171 ADGRL3Q9HAR2 1447 aa26.7■■□□□ 1.87
CBWD3-201ENST00000360171 PLEKHG3A1L390 1219 aa26.7■■□□□ 1.86
CBWD3-201ENST00000360171 SHPRHQ149N8 1683 aa26.69■■□□□ 1.86
CBWD3-201ENST00000360171 ANKARQ7Z5J8 1434 aa26.69■■□□□ 1.86
CBWD3-201ENST00000360171 ACEP12821 1306 aa26.68■■□□□ 1.86
CBWD3-201ENST00000360171 TCERG1O14776 1098 aaKnown RBP26.67■■□□□ 1.86
CBWD3-201ENST00000360171 POLR3AO14802 1390 aaPredicted RBP26.67■■□□□ 1.86
CBWD3-201ENST00000360171 EXOC6Q8TAG9 804 aa26.65■■□□□ 1.86
CBWD3-201ENST00000360171 SENP3-EIF4A1A0A087X0R7 540 aa26.65■■□□□ 1.86
CBWD3-201ENST00000360171 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
CBWD3-201ENST00000360171 USP6P35125 1406 aa26.64■■□□□ 1.86
CBWD3-201ENST00000360171 NME9Q86XW9 330 aa26.63■■□□□ 1.85
CBWD3-201ENST00000360171 PAK3O75914 559 aaPredicted RBP26.63■■□□□ 1.85
CBWD3-201ENST00000360171 PMFBP1Q8TBY8 1022 aa26.63■■□□□ 1.85
CBWD3-201ENST00000360171 ADAMTS8Q9UP79 889 aa26.63■■□□□ 1.85
CBWD3-201ENST00000360171 MTHFSP49914 203 aa26.62■■□□□ 1.85
CBWD3-201ENST00000360171 MS4A1P11836 297 aa26.61■■□□□ 1.85
CBWD3-201ENST00000360171 MAP2P11137 1827 aaKnown RBP26.6■■□□□ 1.85
CBWD3-201ENST00000360171 WDR43Q15061 677 aaKnown RBP eCLIP26.6■■□□□ 1.85
CBWD3-201ENST00000360171 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
CBWD3-201ENST00000360171 SSH2Q76I76 1423 aa26.6■■□□□ 1.85
CBWD3-201ENST00000360171 PROSER2Q86WR7 435 aaPredicted RBP26.59■■□□□ 1.85
CBWD3-201ENST00000360171 TTC21BQ7Z4L5 1316 aa26.58■■□□□ 1.85
CBWD3-201ENST00000360171 ZBTB47Q9UFB7 747 aaPredicted RBP26.57■■□□□ 1.84
CBWD3-201ENST00000360171 C14orf37Q86TY3 774 aa26.56■■□□□ 1.84
CBWD3-201ENST00000360171 COL3A1P02461 1466 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-201ENST00000360171 CDCA7LQ96GN5 454 aa26.55■■□□□ 1.84
CBWD3-201ENST00000360171 NGDNQ8NEJ9 315 aaKnown RBP26.54■■□□□ 1.84
CBWD3-201ENST00000360171 XIRP1Q702N8 1843 aaKnown RBP26.54■■□□□ 1.84
CBWD3-201ENST00000360171 PIK3C2AO00443 1686 aa26.53■■□□□ 1.84
CBWD3-201ENST00000360171 SALL2Q9Y467 1007 aaPredicted RBP26.53■■□□□ 1.84
CBWD3-201ENST00000360171 FBLN1P23142 703 aa26.53■■□□□ 1.84
CBWD3-201ENST00000360171 OVOS2A0A0J9YW53 1432 aa26.52■■□□□ 1.84
CBWD3-201ENST00000360171 OVOS2Q6IE36 1432 aa26.52■■□□□ 1.84
CBWD3-201ENST00000360171 TMEM94Q12767 1356 aa26.52■■□□□ 1.84
CBWD3-201ENST00000360171 COG3Q96JB2 828 aa26.51■■□□□ 1.83
CBWD3-201ENST00000360171 CFAP53Q96M91 514 aa26.51■■□□□ 1.83
CBWD3-201ENST00000360171 DEKP35659 375 aaKnown RBP26.5■■□□□ 1.83
CBWD3-201ENST00000360171 MARF1Q9Y4F3 1742 aaKnown RBP26.49■■□□□ 1.83
CBWD3-201ENST00000360171 PHF8Q9UPP1 1060 aa26.49■■□□□ 1.83
CBWD3-201ENST00000360171 BACH2Q9BYV9 841 aa26.48■■□□□ 1.83
CBWD3-201ENST00000360171 PDE4AP27815 886 aa26.48■■□□□ 1.83
CBWD3-201ENST00000360171 POLKQ9UBT6 870 aa26.47■■□□□ 1.83
CBWD3-201ENST00000360171 TTC21AQ8NDW8 1320 aa26.47■■□□□ 1.83
CBWD3-201ENST00000360171 AATKQ6ZMQ8 1374 aa26.47■■□□□ 1.83
CBWD3-201ENST00000360171 CCDC146Q8IYE0 955 aa26.46■■□□□ 1.83
CBWD3-201ENST00000360171 PNPLA6Q8IY17 1366 aa26.46■■□□□ 1.83
CBWD3-201ENST00000360171 USP54Q70EL1 1684 aa26.46■■□□□ 1.83
CBWD3-201ENST00000360171 C19orf44Q9H6X5 657 aa26.46■■□□□ 1.83
CBWD3-201ENST00000360171 NCOA3Q9Y6Q9 1424 aa26.45■■□□□ 1.82
CBWD3-201ENST00000360171 ESCO1Q5FWF5 840 aa26.44■■□□□ 1.82
CBWD3-201ENST00000360171 EMILIN1Q9Y6C2 1016 aa26.43■■□□□ 1.82
CBWD3-201ENST00000360171 C1orf167Q5SNV9 1468 aa26.43■■□□□ 1.82
CBWD3-201ENST00000360171 ORAI2Q96SN7 254 aa26.42■■□□□ 1.82
CBWD3-201ENST00000360171 DCCP43146 1447 aa26.42■■□□□ 1.82
CBWD3-201ENST00000360171 KIF1AQ12756 1690 aa26.42■■□□□ 1.82
CBWD3-201ENST00000360171 CDK12Q9NYV4 1490 aaPredicted RBP26.42■■□□□ 1.82
CBWD3-201ENST00000360171 USP31Q70CQ4 1352 aa26.41■■□□□ 1.82
CBWD3-201ENST00000360171 ZNF335Q9H4Z2 1342 aaPredicted RBP26.41■■□□□ 1.82
CBWD3-201ENST00000360171 NBR1Q14596 966 aa26.41■■□□□ 1.82
CBWD3-201ENST00000360171 ZNF521Q96K83 1311 aa26.4■■□□□ 1.82
CBWD3-201ENST00000360171 MST1RQ04912 1400 aa26.4■■□□□ 1.82
CBWD3-201ENST00000360171 RRS1Q15050 365 aaKnown RBP26.4■■□□□ 1.82
CBWD3-201ENST00000360171 CRBNQ96SW2 442 aa26.4■■□□□ 1.82
CBWD3-201ENST00000360171 PEAK1Q9H792 1746 aa26.4■■□□□ 1.82
CBWD3-201ENST00000360171 LRRC7Q96NW7 1537 aa26.39■■□□□ 1.82
CBWD3-201ENST00000360171 PPM1GO15355 546 aaPredicted RBP26.39■■□□□ 1.82
CBWD3-201ENST00000360171 PLIN1O60240 522 aa26.37■■□□□ 1.81
CBWD3-201ENST00000360171 RTL5Q5HYW3 569 aaPredicted RBP26.37■■□□□ 1.81
CBWD3-201ENST00000360171 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
CBWD3-201ENST00000360171 TRPM3Q9HCF6 1732 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-201ENST00000360171 APAF1O14727 1248 aa26.36■■□□□ 1.81
CBWD3-201ENST00000360171 DIAPH1O60610 1272 aaKnown RBP26.36■■□□□ 1.81
CBWD3-201ENST00000360171 U2AF1L5P0DN76 240 aaPredicted RBP26.36■■□□□ 1.81
CBWD3-201ENST00000360171 U2AF1Q01081 240 aaKnown RBP eCLIP26.36■■□□□ 1.81
CBWD3-201ENST00000360171 DUSP27Q5VZP5 1158 aa26.36■■□□□ 1.81
CBWD3-201ENST00000360171 ATF3P18847 181 aa26.35■■□□□ 1.81
CBWD3-201ENST00000360171 U2SURPO15042 1029 aaKnown RBP26.34■■□□□ 1.81
CBWD3-201ENST00000360171 KDM2BQ8NHM5 1336 aa26.33■■□□□ 1.81
CBWD3-201ENST00000360171 MSH6P52701 1360 aa26.33■■□□□ 1.8
CBWD3-201ENST00000360171 FOXO3O43524 673 aa26.32■■□□□ 1.8
CBWD3-201ENST00000360171 NLRP6P59044 892 aa26.32■■□□□ 1.8
CBWD3-201ENST00000360171 PSME1Q06323 249 aa26.32■■□□□ 1.8
CBWD3-201ENST00000360171 NUTM2GQ5VZR2 741 aa26.32■■□□□ 1.8
CBWD3-201ENST00000360171 GOLGA2Q08379 1002 aa26.31■■□□□ 1.8
CBWD3-201ENST00000360171 RUNDC1Q96C34 613 aa26.31■■□□□ 1.8
CBWD3-201ENST00000360171 SOX12O15370 315 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms