RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 NAT10Q9H0A0 1025 aaKnown RBP18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 FOSBP53539 338 aa18.75■□□□□ 0.59
TRAPPC11-202ENST00000357207 TBC1D2Q9BYX2 928 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 TMEM57Q8N5G2 664 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 APPP05067 770 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 DUSP27Q5VZP5 1158 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 CCDC70Q6NSX1 233 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 MPNDQ8N594 471 aa18.74■□□□□ 0.59
TRAPPC11-202ENST00000357207 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
TRAPPC11-202ENST00000357207 ANKRD20A12PQ8NF67 263 aa18.73■□□□□ 0.59
TRAPPC11-202ENST00000357207 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
TRAPPC11-202ENST00000357207 SYNJ2O15056 1496 aa18.73■□□□□ 0.59
TRAPPC11-202ENST00000357207 PLEKHH2Q8IVE3 1493 aa18.72■□□□□ 0.59
TRAPPC11-202ENST00000357207 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
TRAPPC11-202ENST00000357207 FSD1Q9BTV5 496 aa18.72■□□□□ 0.59
TRAPPC11-202ENST00000357207 HECW1Q76N89 1606 aa18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 KINO60870 393 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 TMPOP42166 694 aaKnown RBP18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 SPC24Q8NBT2 197 aa18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 POLA1P09884 1462 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 PRAM1Q96QH2 718 aa18.71■□□□□ 0.59
TRAPPC11-202ENST00000357207 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 LRPPRCP42704 1394 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 NKTRP30414 1462 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 UQCRHLA0A096LP55 91 aa18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 UQCRHP07919 91 aa18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 LRRCC1Q9C099 1032 aa18.7■□□□□ 0.58
TRAPPC11-202ENST00000357207 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 RALYLQ86SE5 291 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 MARCH6O60337 910 aa18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 RPAP2Q8IXW5 612 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 PRKCSHP14314 528 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 RIC3Q7Z5B4 369 aa18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 NEUROD6Q96NK8 337 aa18.69■□□□□ 0.58
TRAPPC11-202ENST00000357207 SSH1Q8WYL5 1049 aa18.68■□□□□ 0.58
TRAPPC11-202ENST00000357207 TOPBP1Q92547 1522 aa18.68■□□□□ 0.58
TRAPPC11-202ENST00000357207 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC11-202ENST00000357207 AIMP1Q12904 312 aaKnown RBP18.68■□□□□ 0.58
TRAPPC11-202ENST00000357207 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
TRAPPC11-202ENST00000357207 FCHSD2O94868 740 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 CABP1Q9NZU7 370 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 SAFBQ15424 915 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 CYP46A1Q9Y6A2 500 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 NLRP6P59044 892 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 SETQ01105 290 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 NFXL1Q6ZNB6 911 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 HIP1O00291 1037 aa18.67■□□□□ 0.58
TRAPPC11-202ENST00000357207 KRT85P78386 507 aa18.66■□□□□ 0.58
TRAPPC11-202ENST00000357207 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
TRAPPC11-202ENST00000357207 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
TRAPPC11-202ENST00000357207 CDK13Q14004 1512 aaKnown RBP18.66■□□□□ 0.58
TRAPPC11-202ENST00000357207 HSP90B2PQ58FF3 399 aa18.65■□□□□ 0.58
TRAPPC11-202ENST00000357207 ABCC5O15440 1437 aa18.65■□□□□ 0.58
TRAPPC11-202ENST00000357207 PCMTD1Q96MG8 357 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC11-202ENST00000357207 SRCIN1Q9C0H9 1055 aa18.65■□□□□ 0.58
TRAPPC11-202ENST00000357207 OLFM4Q6UX06 510 aa18.65■□□□□ 0.58
TRAPPC11-202ENST00000357207 NSD3Q9BZ95 1437 aa18.64■□□□□ 0.57
TRAPPC11-202ENST00000357207 SYCE3A1L190 88 aa18.64■□□□□ 0.57
TRAPPC11-202ENST00000357207 CCDC66A2RUB6 948 aa18.64■□□□□ 0.57
TRAPPC11-202ENST00000357207 PSME1Q06323 249 aa18.64■□□□□ 0.57
TRAPPC11-202ENST00000357207 WASHC4Q2M389 1173 aa18.64■□□□□ 0.57
TRAPPC11-202ENST00000357207 TNPO1Q92973 898 aaKnown RBP18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 CEP89Q96ST8 783 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 PTPN23Q9H3S7 1636 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 MAPKBP1O60336 1514 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 CCDC112Q8NEF3 446 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 CCDC47Q96A33 483 aaKnown RBP18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 TNMDQ9H2S6 317 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 ACBD3Q9H3P7 528 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 HDGFL1Q5TGJ6 251 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 CDK19Q9BWU1 502 aa18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 LARP1BQ659C4 914 aaKnown RBP18.63■□□□□ 0.57
TRAPPC11-202ENST00000357207 PDILTQ8N807 584 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 SMC2O95347 1197 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 IGHDP01880 384 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 ERC1Q8IUD2 1116 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
TRAPPC11-202ENST00000357207 CEBPZQ03701 1054 aaKnown RBP18.61■□□□□ 0.57
TRAPPC11-202ENST00000357207 ANKRD1Q15327 319 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 RAPGEF4Q8WZA2 1011 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 ERICH2A1L162 156 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 SSFA2P28290 1259 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 PDE4CQ08493 712 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 ZNF396Q96N95 335 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 ALDH1L2Q3SY69 923 aa18.6■□□□□ 0.57
TRAPPC11-202ENST00000357207 NESP48681 1621 aa18.59■□□□□ 0.57
TRAPPC11-202ENST00000357207 STK38Q15208 465 aa18.59■□□□□ 0.57
TRAPPC11-202ENST00000357207 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
TRAPPC11-202ENST00000357207 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
TRAPPC11-202ENST00000357207 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 CCP110O43303 1012 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 TRIM27P14373 513 aa18.57■□□□□ 0.56
TRAPPC11-202ENST00000357207 ZSCAN31Q96LW9 406 aaPredicted RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 201.9 ms