RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 ATP2B1P20020 1258 aa17.74■□□□□ 0.43
LMX1B-201ENST00000355497 STK38Q15208 465 aa17.74■□□□□ 0.43
LMX1B-201ENST00000355497 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
LMX1B-201ENST00000355497 RABEP1Q15276 862 aa17.73■□□□□ 0.43
LMX1B-201ENST00000355497 GNAI3P08754 354 aa17.73■□□□□ 0.43
LMX1B-201ENST00000355497 ANKRD18AQ8IVF6 992 aa17.73■□□□□ 0.43
LMX1B-201ENST00000355497 NEK4P51957 841 aa17.73■□□□□ 0.43
LMX1B-201ENST00000355497 PAF1Q8N7H5 531 aa17.72■□□□□ 0.43
LMX1B-201ENST00000355497 KIAA0754O94854 1291 aa17.72■□□□□ 0.43
LMX1B-201ENST00000355497 SERPINC1P01008 464 aa17.72■□□□□ 0.43
LMX1B-201ENST00000355497 SPC24Q8NBT2 197 aa17.72■□□□□ 0.43
LMX1B-201ENST00000355497 SMARCA2P51531 1590 aa17.72■□□□□ 0.43
LMX1B-201ENST00000355497 DACH1Q9UI36 760 aa17.71■□□□□ 0.43
LMX1B-201ENST00000355497 SEPT7Q16181 437 aaKnown RBP17.71■□□□□ 0.43
LMX1B-201ENST00000355497 CCDC30Q5VVM6 783 aa17.71■□□□□ 0.43
LMX1B-201ENST00000355497 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
LMX1B-201ENST00000355497 TXLNBQ8N3L3 684 aa17.71■□□□□ 0.43
LMX1B-201ENST00000355497 LUC7LQ9NQ29 371 aaKnown RBP17.71■□□□□ 0.43
LMX1B-201ENST00000355497 PPFIBP1Q86W92 1011 aa17.71■□□□□ 0.42
LMX1B-201ENST00000355497 FIBPO43427 364 aa17.7■□□□□ 0.42
LMX1B-201ENST00000355497 CCDC181Q5TID7 509 aa17.7■□□□□ 0.42
LMX1B-201ENST00000355497 JMYQ8N9B5 988 aa17.7■□□□□ 0.42
LMX1B-201ENST00000355497 GOLGA6L7A0A1B0GV03 622 aa17.7■□□□□ 0.42
LMX1B-201ENST00000355497 ERC1Q8IUD2 1116 aa17.7■□□□□ 0.42
LMX1B-201ENST00000355497 CEBPZQ03701 1054 aaKnown RBP17.69■□□□□ 0.42
LMX1B-201ENST00000355497 ANKRD62A6NC57 917 aa17.69■□□□□ 0.42
LMX1B-201ENST00000355497 CCDC192P0DO97 292 aa17.69■□□□□ 0.42
LMX1B-201ENST00000355497 KLHL34Q8N239 644 aa17.69■□□□□ 0.42
LMX1B-201ENST00000355497 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
LMX1B-201ENST00000355497 AEBP1Q8IUX7 1158 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 DEF6Q9H4E7 631 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 CCDC7Q96M83 1385 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 ERLIN1O75477 346 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 ENOX2Q16206 610 aaKnown RBP17.68■□□□□ 0.42
LMX1B-201ENST00000355497 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 NLRP2Q9NX02 1062 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
LMX1B-201ENST00000355497 STIM1Q13586 685 aa17.67■□□□□ 0.42
LMX1B-201ENST00000355497 WASHC2AQ641Q2 1341 aa17.67■□□□□ 0.42
LMX1B-201ENST00000355497 JPH4Q96JJ6 628 aa17.67■□□□□ 0.42
LMX1B-201ENST00000355497 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
LMX1B-201ENST00000355497 PDCL3Q9H2J4 239 aa17.67■□□□□ 0.42
LMX1B-201ENST00000355497 EIF3JO75822 258 aaKnown RBP17.66■□□□□ 0.42
LMX1B-201ENST00000355497 GCC1Q96CN9 775 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 TNMDQ9H2S6 317 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 GGNBP2Q9H3C7 697 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 CCDC112Q8NEF3 446 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 CBFA2T2O43439 604 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
LMX1B-201ENST00000355497 ANKRD1Q15327 319 aa17.65■□□□□ 0.42
LMX1B-201ENST00000355497 CYP46A1Q9Y6A2 500 aa17.65■□□□□ 0.42
LMX1B-201ENST00000355497 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
LMX1B-201ENST00000355497 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.65■□□□□ 0.42
LMX1B-201ENST00000355497 TANGO6Q9C0B7 1094 aa17.64■□□□□ 0.42
LMX1B-201ENST00000355497 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
LMX1B-201ENST00000355497 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
LMX1B-201ENST00000355497 GNAI2P04899 355 aa17.63■□□□□ 0.41
LMX1B-201ENST00000355497 IQCEQ6IPM2 695 aa17.63■□□□□ 0.41
LMX1B-201ENST00000355497 TRIM22Q8IYM9 498 aa17.63■□□□□ 0.41
LMX1B-201ENST00000355497 ATF3P18847 181 aa17.63■□□□□ 0.41
LMX1B-201ENST00000355497 GNL3LQ9NVN8 582 aaKnown RBP17.63■□□□□ 0.41
LMX1B-201ENST00000355497 BRPF3Q9ULD4 1205 aa17.63■□□□□ 0.41
LMX1B-201ENST00000355497 WDR33Q9C0J8 1336 aaKnown RBP17.63■□□□□ 0.41
LMX1B-201ENST00000355497 ME1P48163 572 aa17.62■□□□□ 0.41
LMX1B-201ENST00000355497 EZRP15311 586 aaKnown RBP17.62■□□□□ 0.41
LMX1B-201ENST00000355497 STK3Q13188 491 aa17.62■□□□□ 0.41
LMX1B-201ENST00000355497 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
LMX1B-201ENST00000355497 CABP2Q9NPB3 220 aa17.62■□□□□ 0.41
LMX1B-201ENST00000355497 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 CCDC69A6NI79 296 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 TAX1BP1Q86VP1 789 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 CNNM1Q9NRU3 951 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 FAM177BA6PVY3 158 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 NUTM2GQ5VZR2 741 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 CENPHQ9H3R5 247 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
LMX1B-201ENST00000355497 ZHX3Q9H4I2 956 aa17.6■□□□□ 0.41
LMX1B-201ENST00000355497 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
LMX1B-201ENST00000355497 KRT85P78386 507 aa17.6■□□□□ 0.41
LMX1B-201ENST00000355497 NACAP1Q9BZK3 213 aa17.6■□□□□ 0.41
LMX1B-201ENST00000355497 NOL7Q9UMY1 257 aaKnown RBP17.59■□□□□ 0.41
LMX1B-201ENST00000355497 FAM193AP78312 1265 aa17.59■□□□□ 0.41
LMX1B-201ENST00000355497 TWISTNBQ3B726 338 aaPredicted RBP17.59■□□□□ 0.41
LMX1B-201ENST00000355497 K7ELQ4 463 aaPredicted RBP17.59■□□□□ 0.41
LMX1B-201ENST00000355497 PLEKHO1Q53GL0 409 aaPredicted RBP17.59■□□□□ 0.41
LMX1B-201ENST00000355497 TCP11L2Q8N4U5 519 aa17.59■□□□□ 0.41
LMX1B-201ENST00000355497 UQCRHLA0A096LP55 91 aa17.58■□□□□ 0.41
LMX1B-201ENST00000355497 UQCRHP07919 91 aa17.58■□□□□ 0.41
LMX1B-201ENST00000355497 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.41
LMX1B-201ENST00000355497 FAM177A1Q8N128 213 aaPredicted RBP17.58■□□□□ 0.41
LMX1B-201ENST00000355497 GBP2P32456 591 aaPredicted RBP17.58■□□□□ 0.4
LMX1B-201ENST00000355497 INCENPQ9NQS7 918 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 PTPRGP23470 1445 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 SOGA3Q5TF21 947 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 USP8P40818 1118 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 NLRP6P59044 892 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 GRPEL1Q9HAV7 217 aa17.58■□□□□ 0.4
LMX1B-201ENST00000355497 NOB1Q9ULX3 412 aaKnown RBP17.58■□□□□ 0.4
LMX1B-201ENST00000355497 MTHFSP49914 203 aa17.57■□□□□ 0.4
LMX1B-201ENST00000355497 ATP2B2Q01814 1243 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms