RNA–Protein interactions for RNA: ENST00000355272.10

AP3D1-202, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AP3D1, Length 5,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-202ENST00000355272 NSD3Q9BZ95 1437 aa20.28■□□□□ 0.84
AP3D1-202ENST00000355272 ZC3H6P61129 1189 aaKnown RBP20.27■□□□□ 0.84
AP3D1-202ENST00000355272 PDE4CQ08493 712 aa20.27■□□□□ 0.84
AP3D1-202ENST00000355272 DCTN1Q14203 1278 aa20.27■□□□□ 0.84
AP3D1-202ENST00000355272 RNF20Q5VTR2 975 aa20.27■□□□□ 0.84
AP3D1-202ENST00000355272 CPLX2Q6PUV4 134 aaKnown RBP20.27■□□□□ 0.84
AP3D1-202ENST00000355272 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.84
AP3D1-202ENST00000355272 LRRFIP1Q32MZ4 808 aaKnown RBP20.27■□□□□ 0.84
AP3D1-202ENST00000355272 MEX3CQ5U5Q3 659 aaKnown RBP20.27■□□□□ 0.84
AP3D1-202ENST00000355272 FBXW7Q969H0 707 aa20.27■□□□□ 0.84
AP3D1-202ENST00000355272 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.83
AP3D1-202ENST00000355272 CCDC61Q9Y6R9 512 aa20.27■□□□□ 0.83
AP3D1-202ENST00000355272 CAMSAP2Q08AD1 1489 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 BECN2A8MW95 431 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 SMC3Q9UQE7 1217 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 TRDNQ13061 729 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 KDM4AO75164 1064 aa20.26■□□□□ 0.83
AP3D1-202ENST00000355272 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 CEBPAP49715 358 aaPredicted RBP20.25■□□□□ 0.83
AP3D1-202ENST00000355272 IDI1Q13907 227 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 FSD1Q9BTV5 496 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 FYB1O15117 783 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 BICD2Q8TD16 824 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 SIL1Q9H173 461 aa20.25■□□□□ 0.83
AP3D1-202ENST00000355272 ZNF592Q92610 1267 aa20.24■□□□□ 0.83
AP3D1-202ENST00000355272 RNF214Q8ND24 703 aa20.24■□□□□ 0.83
AP3D1-202ENST00000355272 DNAJC2Q99543 621 aaKnown RBP20.24■□□□□ 0.83
AP3D1-202ENST00000355272 MYL6BP14649 208 aa20.24■□□□□ 0.83
AP3D1-202ENST00000355272 NEK4P51957 841 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 NFXL1Q6ZNB6 911 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 NASPP49321 788 aaPredicted RBP20.23■□□□□ 0.83
AP3D1-202ENST00000355272 NCOA1Q15788 1441 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 GOLGA6L19H0YKK7 550 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 TMPOP42166 694 aaKnown RBP20.23■□□□□ 0.83
AP3D1-202ENST00000355272 NUCB2P80303 420 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
AP3D1-202ENST00000355272 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 WDR63Q8IWG1 891 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 CD109Q6YHK3 1445 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AP3D1-202ENST00000355272 AAMPQ13685 434 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 R3HCC1Q9Y3T6 440 aaKnown RBP20.22■□□□□ 0.83
AP3D1-202ENST00000355272 DHX16O60231 1041 aaKnown RBP20.22■□□□□ 0.83
AP3D1-202ENST00000355272 TOM1L2Q6ZVM7 507 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 GNAI2P04899 355 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
AP3D1-202ENST00000355272 MCM10Q7L590 875 aa20.21■□□□□ 0.83
AP3D1-202ENST00000355272 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
AP3D1-202ENST00000355272 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.21■□□□□ 0.83
AP3D1-202ENST00000355272 NME9Q86XW9 330 aa20.21■□□□□ 0.83
AP3D1-202ENST00000355272 SMG6Q86US8 1419 aaKnown RBP20.21■□□□□ 0.83
AP3D1-202ENST00000355272 MAP4K4O95819 1239 aaPredicted RBP20.2■□□□□ 0.82
AP3D1-202ENST00000355272 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
AP3D1-202ENST00000355272 MTMR7Q9Y216 660 aa20.2■□□□□ 0.82
AP3D1-202ENST00000355272 TRIM29Q14134 588 aa20.2■□□□□ 0.82
AP3D1-202ENST00000355272 CCDC27Q2M243 656 aa20.2■□□□□ 0.82
AP3D1-202ENST00000355272 SLFN5Q08AF3 891 aa20.19■□□□□ 0.82
AP3D1-202ENST00000355272 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
AP3D1-202ENST00000355272 NOL10Q9BSC4 688 aaKnown RBP20.19■□□□□ 0.82
AP3D1-202ENST00000355272 EMILIN1Q9Y6C2 1016 aa20.19■□□□□ 0.82
AP3D1-202ENST00000355272 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 TPD52L1Q16890 204 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 RALYLQ86SE5 291 aaKnown RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
AP3D1-202ENST00000355272 PTPN23Q9H3S7 1636 aa20.18■□□□□ 0.82
AP3D1-202ENST00000355272 SAMD1Q6SPF0 538 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 CAVIN1Q6NZI2 390 aaKnown RBP20.18■□□□□ 0.82
AP3D1-202ENST00000355272 FCHSD2O94868 740 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 CNTROBQ8N137 903 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 FBLN1P23142 703 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 TMEM57Q8N5G2 664 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
AP3D1-202ENST00000355272 CCAR2Q8N163 923 aaKnown RBP20.16■□□□□ 0.82
AP3D1-202ENST00000355272 SRCIN1Q9C0H9 1055 aa20.16■□□□□ 0.82
AP3D1-202ENST00000355272 BCL11BQ9C0K0 894 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-202ENST00000355272 CABP4P57796 275 aa20.16■□□□□ 0.82
AP3D1-202ENST00000355272 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
AP3D1-202ENST00000355272 GCC1Q96CN9 775 aa20.15■□□□□ 0.82
AP3D1-202ENST00000355272 NFE2L2Q16236 605 aa20.15■□□□□ 0.82
AP3D1-202ENST00000355272 ADGRL1O94910 1474 aa20.15■□□□□ 0.82
AP3D1-202ENST00000355272 KLHL34Q8N239 644 aa20.15■□□□□ 0.82
AP3D1-202ENST00000355272 ZNF771Q7L3S4 317 aaPredicted RBP20.14■□□□□ 0.81
AP3D1-202ENST00000355272 CCDC85AQ96PX6 553 aaPredicted RBP20.14■□□□□ 0.81
AP3D1-202ENST00000355272 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
AP3D1-202ENST00000355272 FOXO3O43524 673 aa20.13■□□□□ 0.81
AP3D1-202ENST00000355272 SRGAP3O43295 1099 aa20.13■□□□□ 0.81
AP3D1-202ENST00000355272 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
AP3D1-202ENST00000355272 CHMP4CQ96CF2 233 aa20.12■□□□□ 0.81
AP3D1-202ENST00000355272 EXOC6BQ9Y2D4 811 aa20.12■□□□□ 0.81
AP3D1-202ENST00000355272 ERICH2A1L162 156 aa20.11■□□□□ 0.81
AP3D1-202ENST00000355272 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
AP3D1-202ENST00000355272 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
AP3D1-202ENST00000355272 PRPF40AO75400 957 aaKnown RBP20.11■□□□□ 0.81
AP3D1-202ENST00000355272 CCT4P50991 539 aaKnown RBP20.11■□□□□ 0.81
AP3D1-202ENST00000355272 LRRCC1Q9C099 1032 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms