RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PNISRQ8TF01 805 aaKnown RBP21.02■□□□□ 0.96
CTSA-202ENST00000354880 TTC21BQ7Z4L5 1316 aa21.02■□□□□ 0.95
CTSA-202ENST00000354880 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
CTSA-202ENST00000354880 MSH6P52701 1360 aa21.01■□□□□ 0.95
CTSA-202ENST00000354880 SSH2Q76I76 1423 aa21■□□□□ 0.95
CTSA-202ENST00000354880 NME9Q86XW9 330 aa21■□□□□ 0.95
CTSA-202ENST00000354880 CADPS2Q86UW7 1296 aa20.99■□□□□ 0.95
CTSA-202ENST00000354880 C1orf167Q5SNV9 1468 aa20.99■□□□□ 0.95
CTSA-202ENST00000354880 TTC21AQ8NDW8 1320 aa20.97■□□□□ 0.95
CTSA-202ENST00000354880 MST1RQ04912 1400 aa20.97■□□□□ 0.95
CTSA-202ENST00000354880 ORAI2Q96SN7 254 aa20.97■□□□□ 0.95
CTSA-202ENST00000354880 COG3Q96JB2 828 aa20.96■□□□□ 0.95
CTSA-202ENST00000354880 ZRANB1Q9UGI0 708 aa20.94■□□□□ 0.94
CTSA-202ENST00000354880 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
CTSA-202ENST00000354880 MTHFSP49914 203 aa20.94■□□□□ 0.94
CTSA-202ENST00000354880 KIF1AQ12756 1690 aa20.93■□□□□ 0.94
CTSA-202ENST00000354880 CENPBP07199 599 aaPredicted RBP20.93■□□□□ 0.94
CTSA-202ENST00000354880 PSME1Q06323 249 aa20.92■□□□□ 0.94
CTSA-202ENST00000354880 OVOS2A0A0J9YW53 1432 aa20.92■□□□□ 0.94
CTSA-202ENST00000354880 OVOS2Q6IE36 1432 aa20.92■□□□□ 0.94
CTSA-202ENST00000354880 FOXO3O43524 673 aa20.9■□□□□ 0.94
CTSA-202ENST00000354880 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
CTSA-202ENST00000354880 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
CTSA-202ENST00000354880 PIK3C2AO00443 1686 aa20.89■□□□□ 0.94
CTSA-202ENST00000354880 PAK3O75914 559 aaPredicted RBP20.89■□□□□ 0.93
CTSA-202ENST00000354880 WDR43Q15061 677 aaKnown RBP eCLIP20.89■□□□□ 0.93
CTSA-202ENST00000354880 AATKQ6ZMQ8 1374 aa20.89■□□□□ 0.93
CTSA-202ENST00000354880 USP31Q70CQ4 1352 aa20.89■□□□□ 0.93
CTSA-202ENST00000354880 MAP2P11137 1827 aaKnown RBP20.88■□□□□ 0.93
CTSA-202ENST00000354880 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
CTSA-202ENST00000354880 FBLN1P23142 703 aa20.86■□□□□ 0.93
CTSA-202ENST00000354880 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
CTSA-202ENST00000354880 POLKQ9UBT6 870 aa20.86■□□□□ 0.93
CTSA-202ENST00000354880 INSRP06213 1382 aa20.86■□□□□ 0.93
CTSA-202ENST00000354880 NLRP6P59044 892 aa20.85■□□□□ 0.93
CTSA-202ENST00000354880 LTBP4Q8N2S1 1624 aa20.85■□□□□ 0.93
CTSA-202ENST00000354880 ADAMTS8Q9UP79 889 aa20.85■□□□□ 0.93
CTSA-202ENST00000354880 USP54Q70EL1 1684 aa20.84■□□□□ 0.93
CTSA-202ENST00000354880 KRT28Q7Z3Y7 464 aa20.84■□□□□ 0.93
CTSA-202ENST00000354880 SLAIN2Q9P270 581 aa20.84■□□□□ 0.93
CTSA-202ENST00000354880 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.93
CTSA-202ENST00000354880 SMG6Q86US8 1419 aaKnown RBP20.83■□□□□ 0.92
CTSA-202ENST00000354880 PNPLA6Q8IY17 1366 aa20.83■□□□□ 0.92
CTSA-202ENST00000354880 SHPRHQ149N8 1683 aa20.83■□□□□ 0.92
CTSA-202ENST00000354880 TRPM3Q9HCF6 1732 aaPredicted RBP20.82■□□□□ 0.92
CTSA-202ENST00000354880 NPHP3Q7Z494 1330 aa20.82■□□□□ 0.92
CTSA-202ENST00000354880 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
CTSA-202ENST00000354880 PPM1GO15355 546 aaPredicted RBP20.81■□□□□ 0.92
CTSA-202ENST00000354880 RRS1Q15050 365 aaKnown RBP20.81■□□□□ 0.92
CTSA-202ENST00000354880 NUTM2GQ5VZR2 741 aa20.81■□□□□ 0.92
CTSA-202ENST00000354880 BRINP3Q76B58 766 aa20.81■□□□□ 0.92
CTSA-202ENST00000354880 COL3A1P02461 1466 aaPredicted RBP20.81■□□□□ 0.92
CTSA-202ENST00000354880 BLMP54132 1417 aaPredicted RBP20.81■□□□□ 0.92
CTSA-202ENST00000354880 MARF1Q9Y4F3 1742 aaKnown RBP20.8■□□□□ 0.92
CTSA-202ENST00000354880 CDK12Q9NYV4 1490 aaPredicted RBP20.79■□□□□ 0.92
CTSA-202ENST00000354880 ZBED9Q6R2W3 1325 aa20.78■□□□□ 0.92
CTSA-202ENST00000354880 SOX12O15370 315 aa20.78■□□□□ 0.92
CTSA-202ENST00000354880 DDX17Q92841 729 aaKnown RBP20.78■□□□□ 0.92
CTSA-202ENST00000354880 NUDCQ9Y266 331 aa20.78■□□□□ 0.92
CTSA-202ENST00000354880 DIAPH1O60610 1272 aaKnown RBP20.77■□□□□ 0.92
CTSA-202ENST00000354880 SBNO1A3KN83 1393 aa20.76■□□□□ 0.91
CTSA-202ENST00000354880 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
CTSA-202ENST00000354880 PXDNQ92626 1479 aa20.75■□□□□ 0.91
CTSA-202ENST00000354880 LMOD2Q6P5Q4 547 aa20.75■□□□□ 0.91
CTSA-202ENST00000354880 MAP3K19Q56UN5 1328 aa20.73■□□□□ 0.91
CTSA-202ENST00000354880 U2AF1L5P0DN76 240 aaPredicted RBP20.73■□□□□ 0.91
CTSA-202ENST00000354880 U2AF1Q01081 240 aaKnown RBP eCLIP20.73■□□□□ 0.91
CTSA-202ENST00000354880 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
CTSA-202ENST00000354880 KCNH5Q8NCM2 988 aa20.72■□□□□ 0.91
CTSA-202ENST00000354880 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
CTSA-202ENST00000354880 SENP3-EIF4A1A0A087X0R7 540 aa20.71■□□□□ 0.91
CTSA-202ENST00000354880 TNS3Q68CZ2 1445 aa20.71■□□□□ 0.91
CTSA-202ENST00000354880 CCDC146Q8IYE0 955 aa20.71■□□□□ 0.91
CTSA-202ENST00000354880 FLT4P35916 1363 aa20.7■□□□□ 0.9
CTSA-202ENST00000354880 SLIT3O75094 1523 aa20.7■□□□□ 0.9
CTSA-202ENST00000354880 NFAT5O94916 1531 aa20.7■□□□□ 0.9
CTSA-202ENST00000354880 USP19O94966 1318 aa20.7■□□□□ 0.9
CTSA-202ENST00000354880 KIF24Q5T7B8 1368 aa20.7■□□□□ 0.9
CTSA-202ENST00000354880 IL13P35225 146 aa20.69■□□□□ 0.9
CTSA-202ENST00000354880 AMPHP49418 695 aa20.69■□□□□ 0.9
CTSA-202ENST00000354880 SOS2Q07890 1332 aaPredicted RBP20.69■□□□□ 0.9
CTSA-202ENST00000354880 SPATA31A3Q5VYP0 1347 aa20.69■□□□□ 0.9
CTSA-202ENST00000354880 GCP02774 474 aa20.68■□□□□ 0.9
CTSA-202ENST00000354880 HSP90AB2PQ58FF8 381 aa20.68■□□□□ 0.9
CTSA-202ENST00000354880 ARHGEF10O15013 1369 aa20.68■□□□□ 0.9
CTSA-202ENST00000354880 NHSL1Q5SYE7 1610 aa20.68■□□□□ 0.9
CTSA-202ENST00000354880 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
CTSA-202ENST00000354880 LTN1O94822 1766 aa20.67■□□□□ 0.9
CTSA-202ENST00000354880 SALL2Q9Y467 1007 aaPredicted RBP20.67■□□□□ 0.9
CTSA-202ENST00000354880 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
CTSA-202ENST00000354880 APAF1O14727 1248 aa20.65■□□□□ 0.9
CTSA-202ENST00000354880 EIF4A2Q14240 407 aaKnown RBP20.65■□□□□ 0.9
CTSA-202ENST00000354880 PLEKHG5O94827 1062 aa20.64■□□□□ 0.9
CTSA-202ENST00000354880 HOXC9P31274 260 aa20.64■□□□□ 0.9
CTSA-202ENST00000354880 ROBO1Q9Y6N7 1651 aa20.64■□□□□ 0.9
CTSA-202ENST00000354880 MED1Q15648 1581 aaPredicted RBP20.64■□□□□ 0.9
CTSA-202ENST00000354880 PNNQ9H307 717 aaKnown RBP20.64■□□□□ 0.89
CTSA-202ENST00000354880 FCHSD2O94868 740 aa20.63■□□□□ 0.89
CTSA-202ENST00000354880 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
CTSA-202ENST00000354880 ARHGEF25Q86VW2 580 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms