RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 CABP2Q9NPB3 220 aa6.2□□□□□ -1.42
CKAP5-202ENST00000354558 POLR3DP05423 398 aaPredicted RBP6.2□□□□□ -1.42
CKAP5-202ENST00000354558 SYAP1Q96A49 352 aaPredicted RBP6.2□□□□□ -1.42
CKAP5-202ENST00000354558 ACSBG1Q96GR2 724 aa6.2□□□□□ -1.42
CKAP5-202ENST00000354558 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
CKAP5-202ENST00000354558 MPHOSPH9Q99550 1183 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.19□□□□□ -1.423e-7■■□□□ 13.5
CKAP5-202ENST00000354558 TCIRG1Q13488 830 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 CCDC70Q6NSX1 233 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 TAF12Q16514 161 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 ABCC8Q09428 1581 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 SETD5Q9C0A6 1442 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 ZBTB24O43167 697 aaPredicted RBP6.19□□□□□ -1.42
CKAP5-202ENST00000354558 OFD1O75665 1012 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 CBX1P83916 185 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 CCDC57Q2TAC2 916 aa6.19□□□□□ -1.42
CKAP5-202ENST00000354558 IPO7O95373 1038 aaKnown RBP6.19□□□□□ -1.42
CKAP5-202ENST00000354558 ROCK1Q13464 1354 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 LIG1P18858 919 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 BIRC2Q13490 618 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 PLS1Q14651 629 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 SPOUT1Q5T280 376 aaKnown RBP6.18□□□□□ -1.42
CKAP5-202ENST00000354558 CAVIN4Q5BKX8 364 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 ZNF530Q6P9A1 599 aaPredicted RBP6.18□□□□□ -1.42
CKAP5-202ENST00000354558 NUTM1Q86Y26 1132 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
CKAP5-202ENST00000354558 NOD1Q9Y239 953 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 RNF20Q5VTR2 975 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 DZIP1Q86YF9 867 aaKnown RBP6.18□□□□□ -1.42
CKAP5-202ENST00000354558 HOMER1Q86YM7 354 aa6.18□□□□□ -1.42
CKAP5-202ENST00000354558 ZKSCAN1P17029 563 aaPredicted RBP6.17□□□□□ -1.42
CKAP5-202ENST00000354558 GAS2L2Q8NHY3 880 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 PSMD1Q99460 953 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 RAPGEF3O95398 923 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 CUL5Q93034 780 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 NACAP1Q9BZK3 213 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 EHMT1Q9H9B1 1298 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 FHOD3Q2V2M9 1422 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 TNIKQ9UKE5 1360 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 STK25O00506 426 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 CCDC96Q2M329 555 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 SLF2Q8IX21 1173 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
CKAP5-202ENST00000354558 PRG4Q92954 1404 aaPredicted RBP6.17□□□□□ -1.42
CKAP5-202ENST00000354558 MRPS9P82933 396 aaKnown RBP6.17□□□□□ -1.42
CKAP5-202ENST00000354558 LRP2BPQ9P2M1 347 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 ERC2O15083 957 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 OGFOD1Q8N543 542 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 VEZTQ9HBM0 779 aa6.17□□□□□ -1.42
CKAP5-202ENST00000354558 CENPJQ9HC77 1338 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 PABPN1LA6NDY0 278 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 MSNP26038 577 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 RIPK4P57078 832 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 PTCD1O75127 700 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 HSPA5P11021 654 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 ARHGAP27Q6ZUM4 889 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 A0A087WZG4 1122 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 ST18O60284 1047 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 CEBPAP49715 358 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 EIF6P56537 245 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 TMEM132EQ6IEE7 984 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 DDX46Q7L014 1031 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 CCAR2Q8N163 923 aaKnown RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 CABP5Q9NP86 173 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 UBTFL1P0CB47 393 aaPredicted RBP6.16□□□□□ -1.42
CKAP5-202ENST00000354558 HSPA2P54652 639 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 ARHGEF6Q15052 776 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 ANKRD45Q5TZF3 282 aa6.16□□□□□ -1.42
CKAP5-202ENST00000354558 PIBF1Q8WXW3 757 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 APBA3O96018 575 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 ZNF354CQ86Y25 554 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 CCDC69A6NI79 296 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 TXLNAP40222 546 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 RALBP1Q15311 655 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 DPY19L2Q6NUT2 758 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 PRAM1Q96QH2 718 aa6.15□□□□□ -1.42
CKAP5-202ENST00000354558 ABT1Q9ULW3 272 aaKnown RBP6.15□□□□□ -1.42
CKAP5-202ENST00000354558 RAB3GAP2Q9H2M9 1393 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 BTBD11A6QL63 1104 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 CCDC30Q5VVM6 783 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 NUP133Q8WUM0 1156 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 ZNF287Q9HBT7 754 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 COMMD10Q9Y6G5 202 aa6.15□□□□□ -1.43
CKAP5-202ENST00000354558 AQRO60306 1485 aaKnown RBP eCLIP6.14□□□□□ -1.435e-7■■■■■ 27.6
CKAP5-202ENST00000354558 TDO2P48775 406 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 FSD1Q9BTV5 496 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 ABCF2Q9UG63 623 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 DCAF1Q9Y4B6 1507 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 SKIV2LQ15477 1246 aaKnown RBP6.14□□□□□ -1.43
CKAP5-202ENST00000354558 FOXD4L6Q3SYB3 417 aaPredicted RBP6.14□□□□□ -1.43
CKAP5-202ENST00000354558 GRIPAP1Q4V328 841 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 FOXD4L3Q6VB84 417 aaPredicted RBP6.14□□□□□ -1.43
CKAP5-202ENST00000354558 SSBP05455 408 aaKnown RBP eCLIP6.14□□□□□ -1.431e-26■■□□□ 14.5
CKAP5-202ENST00000354558 ATP2B1P20020 1258 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 ATF7IPQ6VMQ6 1270 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 TRIM22Q8IYM9 498 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 CCDC150Q8NCX0 1101 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
CKAP5-202ENST00000354558 SEPT11Q9NVA2 429 aaKnown RBP6.14□□□□□ -1.43
CKAP5-202ENST00000354558 GOLGA6L19H0YKK7 550 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms