RNA–Protein interactions for RNA: ENST00000352957.8

MRPL39-202, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MRPL39, Length 1,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-202ENST00000352957 USP21Q9UK80 565 aa29.52■■■□□ 2.32
MRPL39-202ENST00000352957 QTRT2Q9H974 415 aaKnown RBP29.51■■■□□ 2.31
MRPL39-202ENST00000352957 RXRBP28702 533 aa29.5■■■□□ 2.31
MRPL39-202ENST00000352957 CABP1Q9NZU7 370 aa29.5■■■□□ 2.31
MRPL39-202ENST00000352957 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
MRPL39-202ENST00000352957 PLCH1Q4KWH8 1693 aa29.48■■■□□ 2.31
MRPL39-202ENST00000352957 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.48■■■□□ 2.31
MRPL39-202ENST00000352957 BCL9LQ86UU0 1499 aa29.48■■■□□ 2.31
MRPL39-202ENST00000352957 PHRF1Q9P1Y6 1649 aaKnown RBP29.46■■■□□ 2.31
MRPL39-202ENST00000352957 SLIT2O94813 1529 aa29.45■■■□□ 2.31
MRPL39-202ENST00000352957 AKAP12Q02952 1782 aa29.45■■■□□ 2.31
MRPL39-202ENST00000352957 ATRNO75882 1429 aa29.44■■■□□ 2.3
MRPL39-202ENST00000352957 NWD2Q9ULI1 1742 aa29.43■■■□□ 2.3
MRPL39-202ENST00000352957 ATAD2Q6PL18 1390 aa29.43■■■□□ 2.3
MRPL39-202ENST00000352957 TRPC5Q9UL62 973 aaPredicted RBP29.43■■■□□ 2.3
MRPL39-202ENST00000352957 USP6P35125 1406 aa29.43■■■□□ 2.3
MRPL39-202ENST00000352957 CDK12Q9NYV4 1490 aaPredicted RBP29.42■■■□□ 2.3
MRPL39-202ENST00000352957 RBM6P78332 1123 aaKnown RBP29.42■■■□□ 2.3
MRPL39-202ENST00000352957 NUTM2GQ5VZR2 741 aa29.42■■■□□ 2.3
MRPL39-202ENST00000352957 ST20-MTHFSA0A0A6YYL1 179 aa29.41■■■□□ 2.3
MRPL39-202ENST00000352957 COL14A1Q05707 1796 aaKnown RBP29.39■■■□□ 2.29
MRPL39-202ENST00000352957 BRD4O60885 1362 aaPredicted RBP29.39■■■□□ 2.29
MRPL39-202ENST00000352957 ABTB2Q8N961 1025 aa29.38■■■□□ 2.29
MRPL39-202ENST00000352957 TESK2Q96S53 571 aa29.38■■■□□ 2.29
MRPL39-202ENST00000352957 USP47Q96K76 1375 aa29.38■■■□□ 2.29
MRPL39-202ENST00000352957 RGS12O14924 1447 aa29.37■■■□□ 2.29
MRPL39-202ENST00000352957 FAM83GA6ND36 823 aa29.37■■■□□ 2.29
MRPL39-202ENST00000352957 UNC5CLQ8IV45 518 aa29.37■■■□□ 2.29
MRPL39-202ENST00000352957 MON2Q7Z3U7 1717 aa29.35■■■□□ 2.29
MRPL39-202ENST00000352957 NRAPQ86VF7 1730 aa29.35■■■□□ 2.29
MRPL39-202ENST00000352957 SSH2Q76I76 1423 aa29.35■■■□□ 2.29
MRPL39-202ENST00000352957 NRKQ7Z2Y5 1582 aa29.35■■■□□ 2.29
MRPL39-202ENST00000352957 PIK3C2AO00443 1686 aa29.34■■■□□ 2.29
MRPL39-202ENST00000352957 CPSF1Q10570 1443 aaKnown RBP29.34■■■□□ 2.29
MRPL39-202ENST00000352957 ZNF692Q9BU19 519 aaPredicted RBP29.32■■■□□ 2.28
MRPL39-202ENST00000352957 GLI3P10071 1580 aa29.31■■■□□ 2.28
MRPL39-202ENST00000352957 USP19O94966 1318 aa29.31■■■□□ 2.28
MRPL39-202ENST00000352957 NLRP13Q86W25 1043 aa29.3■■■□□ 2.28
MRPL39-202ENST00000352957 GJD4Q96KN9 370 aaPredicted RBP29.3■■■□□ 2.28
MRPL39-202ENST00000352957 CD163L1Q9NR16 1453 aa29.29■■■□□ 2.28
MRPL39-202ENST00000352957 KTN1Q86UP2 1357 aaKnown RBP29.29■■■□□ 2.28
MRPL39-202ENST00000352957 KIAA0232Q92628 1395 aa29.29■■■□□ 2.28
MRPL39-202ENST00000352957 TMC1Q8TDI8 760 aa29.29■■■□□ 2.28
MRPL39-202ENST00000352957 PUS7Q96PZ0 661 aaKnown RBP29.29■■■□□ 2.28
MRPL39-202ENST00000352957 PRDM11Q9NQV5 511 aa29.29■■■□□ 2.28
MRPL39-202ENST00000352957 BTG4Q9NY30 223 aa29.28■■■□□ 2.28
MRPL39-202ENST00000352957 TTC21BQ7Z4L5 1316 aa29.27■■■□□ 2.28
MRPL39-202ENST00000352957 ZC3H6P61129 1189 aaKnown RBP29.27■■■□□ 2.28
MRPL39-202ENST00000352957 SLC12A5Q9H2X9 1139 aa29.27■■■□□ 2.28
MRPL39-202ENST00000352957 SLC24A1O60721 1099 aa29.26■■■□□ 2.27
MRPL39-202ENST00000352957 NLRP6P59044 892 aa29.25■■■□□ 2.27
MRPL39-202ENST00000352957 CHRNA2Q15822 529 aa29.25■■■□□ 2.27
MRPL39-202ENST00000352957 VPS72Q15906 364 aa29.25■■■□□ 2.27
MRPL39-202ENST00000352957 SLIT3O75094 1523 aa29.25■■■□□ 2.27
MRPL39-202ENST00000352957 TTC21AQ8NDW8 1320 aa29.22■■■□□ 2.27
MRPL39-202ENST00000352957 GCP02774 474 aa29.22■■■□□ 2.27
MRPL39-202ENST00000352957 CCDC9Q9Y3X0 531 aaKnown RBP29.22■■■□□ 2.27
MRPL39-202ENST00000352957 TMF1P82094 1093 aa29.21■■■□□ 2.27
MRPL39-202ENST00000352957 CPDO75976 1380 aa29.21■■■□□ 2.27
MRPL39-202ENST00000352957 HDGFL2Q7Z4V5 671 aaPredicted RBP29.2■■■□□ 2.26
MRPL39-202ENST00000352957 LMO7Q8WWI1 1683 aa29.2■■■□□ 2.26
MRPL39-202ENST00000352957 A0A1W2PP64 1363 aa29.19■■■□□ 2.26
MRPL39-202ENST00000352957 NINLQ9Y2I6 1382 aa29.18■■■□□ 2.26
MRPL39-202ENST00000352957 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.18■■■□□ 2.26
MRPL39-202ENST00000352957 TERF2IPQ9NYB0 399 aa29.18■■■□□ 2.26
MRPL39-202ENST00000352957 BRWD3Q6RI45 1802 aa29.17■■■□□ 2.26
MRPL39-202ENST00000352957 USP54Q70EL1 1684 aa29.17■■■□□ 2.26
MRPL39-202ENST00000352957 EDC4Q6P2E9 1401 aaKnown RBP29.16■■■□□ 2.26
MRPL39-202ENST00000352957 CAMTA1Q9Y6Y1 1673 aa29.15■■■□□ 2.26
MRPL39-202ENST00000352957 UPF1Q92900 1129 aaKnown RBP eCLIP29.13■■■□□ 2.25
MRPL39-202ENST00000352957 STRN4Q9NRL3 753 aa29.13■■■□□ 2.25
MRPL39-202ENST00000352957 ZRANB1Q9UGI0 708 aa29.13■■■□□ 2.25
MRPL39-202ENST00000352957 ZBTB7CA1YPR0 619 aa29.12■■■□□ 2.25
MRPL39-202ENST00000352957 NME9Q86XW9 330 aa29.12■■■□□ 2.25
MRPL39-202ENST00000352957 SPATA31A5Q5VU36 1347 aa29.11■■■□□ 2.25
MRPL39-202ENST00000352957 SPATA31A7Q8IWB4 1347 aa29.11■■■□□ 2.25
MRPL39-202ENST00000352957 MYOM1P52179 1685 aa29.11■■■□□ 2.25
MRPL39-202ENST00000352957 COL18A1P39060 1754 aa29.11■■■□□ 2.25
MRPL39-202ENST00000352957 CDCA8Q53HL2 280 aa29.1■■■□□ 2.25
MRPL39-202ENST00000352957 USP31Q70CQ4 1352 aa29.1■■■□□ 2.25
MRPL39-202ENST00000352957 NFAT5O94916 1531 aa29.1■■■□□ 2.25
MRPL39-202ENST00000352957 SOX12O15370 315 aa29.09■■■□□ 2.25
MRPL39-202ENST00000352957 ONECUT3O60422 494 aaPredicted RBP29.09■■■□□ 2.25
MRPL39-202ENST00000352957 SEPT12Q8IYM1 358 aa29.09■■■□□ 2.25
MRPL39-202ENST00000352957 KCNH5Q8NCM2 988 aa29.09■■■□□ 2.25
MRPL39-202ENST00000352957 ANKRD36BQ8N2N9 1353 aa29.08■■■□□ 2.25
MRPL39-202ENST00000352957 EVA1CP58658 441 aa29.07■■■□□ 2.24
MRPL39-202ENST00000352957 FAM98CQ17RN3 349 aaKnown RBP29.07■■■□□ 2.24
MRPL39-202ENST00000352957 RGPD5Q99666 1765 aa29.07■■■□□ 2.24
MRPL39-202ENST00000352957 COL5A2P05997 1499 aaPredicted RBP29.06■■■□□ 2.24
MRPL39-202ENST00000352957 AATKQ6ZMQ8 1374 aa29.06■■■□□ 2.24
MRPL39-202ENST00000352957 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
MRPL39-202ENST00000352957 SPATA31A1Q5TZJ5 1347 aa29.05■■■□□ 2.24
MRPL39-202ENST00000352957 HSPA5P11021 654 aaKnown RBP29.05■■■□□ 2.24
MRPL39-202ENST00000352957 THSD7AQ9UPZ6 1657 aa29.05■■■□□ 2.24
MRPL39-202ENST00000352957 A0A0G2JS52 829 aa29.04■■■□□ 2.24
MRPL39-202ENST00000352957 MYT1Q01538 1121 aa29.04■■■□□ 2.24
MRPL39-202ENST00000352957 LTN1O94822 1766 aa29.03■■■□□ 2.24
MRPL39-202ENST00000352957 LARP1Q6PKG0 1096 aaKnown RBP29.03■■■□□ 2.24
MRPL39-202ENST00000352957 ARHGEF25Q86VW2 580 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms