RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 ARXQ96QS3 562 aa14.31□□□□□ -0.12
UBE2D3-205ENST00000350435 HFM1A2PYH4 1435 aa14.31□□□□□ -0.12
UBE2D3-205ENST00000350435 PDE3BQ13370 1112 aa14.3□□□□□ -0.12
UBE2D3-205ENST00000350435 LMOD2Q6P5Q4 547 aa14.3□□□□□ -0.12
UBE2D3-205ENST00000350435 MTFR1LQ9H019 292 aa14.3□□□□□ -0.12
UBE2D3-205ENST00000350435 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
UBE2D3-205ENST00000350435 DNAJC5GQ8N7S2 189 aa14.29□□□□□ -0.12
UBE2D3-205ENST00000350435 BCL11BQ9C0K0 894 aaPredicted RBP14.29□□□□□ -0.12
UBE2D3-205ENST00000350435 E9PCH4 1651 aa14.28□□□□□ -0.12
UBE2D3-205ENST00000350435 PSME1Q06323 249 aa14.28□□□□□ -0.12
UBE2D3-205ENST00000350435 ZNF326Q5BKZ1 582 aaKnown RBP14.28□□□□□ -0.12
UBE2D3-205ENST00000350435 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
UBE2D3-205ENST00000350435 ANKRD30AQ9BXX3 1397 aa14.27□□□□□ -0.12
UBE2D3-205ENST00000350435 SGIP1Q9BQI5 828 aa14.27□□□□□ -0.13
UBE2D3-205ENST00000350435 ARHGEF10O15013 1369 aa14.26□□□□□ -0.13
UBE2D3-205ENST00000350435 SPATA31A1Q5TZJ5 1347 aa14.25□□□□□ -0.13
UBE2D3-205ENST00000350435 WWC3Q9ULE0 1092 aa14.25□□□□□ -0.13
UBE2D3-205ENST00000350435 PLSCR1O15162 318 aa14.24□□□□□ -0.13
UBE2D3-205ENST00000350435 ZNF526Q8TF50 670 aaPredicted RBP14.24□□□□□ -0.13
UBE2D3-205ENST00000350435 STK32BQ9NY57 414 aa14.24□□□□□ -0.13
UBE2D3-205ENST00000350435 AATKQ6ZMQ8 1374 aa14.23□□□□□ -0.13
UBE2D3-205ENST00000350435 GRIN3BO60391 1043 aa14.23□□□□□ -0.13
UBE2D3-205ENST00000350435 KLHL34Q8N239 644 aa14.23□□□□□ -0.13
UBE2D3-205ENST00000350435 DAPK1P53355 1430 aa14.23□□□□□ -0.13
UBE2D3-205ENST00000350435 PRAG1Q86YV5 1406 aa14.23□□□□□ -0.13
UBE2D3-205ENST00000350435 CHIC2Q9UKJ5 165 aa14.22□□□□□ -0.13
UBE2D3-205ENST00000350435 NAIPQ13075 1403 aa14.22□□□□□ -0.13
UBE2D3-205ENST00000350435 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
UBE2D3-205ENST00000350435 WDR90Q96KV7 1748 aa14.21□□□□□ -0.13
UBE2D3-205ENST00000350435 SBF2Q86WG5 1849 aa14.21□□□□□ -0.13
UBE2D3-205ENST00000350435 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
UBE2D3-205ENST00000350435 FMN2Q9NZ56 1722 aa14.21□□□□□ -0.14
UBE2D3-205ENST00000350435 RGPD8O14715 1765 aaPredicted RBP14.2□□□□□ -0.14
UBE2D3-205ENST00000350435 SLC15A2Q16348 729 aa14.19□□□□□ -0.14
UBE2D3-205ENST00000350435 JMYQ8N9B5 988 aa14.18□□□□□ -0.14
UBE2D3-205ENST00000350435 USP35Q9P2H5 1018 aa14.18□□□□□ -0.14
UBE2D3-205ENST00000350435 STRN4Q9NRL3 753 aa14.17□□□□□ -0.14
UBE2D3-205ENST00000350435 TECPR2O15040 1411 aa14.16□□□□□ -0.14
UBE2D3-205ENST00000350435 BARGINQ6ZT62 677 aa14.16□□□□□ -0.14
UBE2D3-205ENST00000350435 KLRG1Q96E93 195 aa14.16□□□□□ -0.14
UBE2D3-205ENST00000350435 PRDM11Q9NQV5 511 aa14.15□□□□□ -0.14
UBE2D3-205ENST00000350435 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
UBE2D3-205ENST00000350435 PCNTO95613 3336 aa14.15□□□□□ -0.14
UBE2D3-205ENST00000350435 ANKRD50Q9ULJ7 1429 aa14.14□□□□□ -0.15
UBE2D3-205ENST00000350435 ADCY9O60503 1353 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 KIF3CO14782 793 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 YBX3P16989 372 aaKnown RBP eCLIP14.13□□□□□ -0.154e-8■□□□□ 8.6
UBE2D3-205ENST00000350435 PROM2Q8N271 834 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 OVOS2A0A0G2JMS6 1433 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 OVOS2A0A0J9YW53 1432 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 OVOS2Q6IE36 1432 aa14.13□□□□□ -0.15
UBE2D3-205ENST00000350435 PARP4Q9UKK3 1724 aaKnown RBP14.12□□□□□ -0.15
UBE2D3-205ENST00000350435 NLGN2Q8NFZ4 835 aa14.11□□□□□ -0.15
UBE2D3-205ENST00000350435 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
UBE2D3-205ENST00000350435 NRXN1Q9ULB1 1477 aa14.11□□□□□ -0.15
UBE2D3-205ENST00000350435 TOPAZ1Q8N9V7 1692 aa14.1□□□□□ -0.15
UBE2D3-205ENST00000350435 IFT172Q9UG01 1749 aa14.1□□□□□ -0.15
UBE2D3-205ENST00000350435 POLD1P28340 1107 aa14.1□□□□□ -0.15
UBE2D3-205ENST00000350435 DHX57Q6P158 1386 aaKnown RBP14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 KIF1BO60333 1816 aa14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 EVA1CP58658 441 aa14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 TXNRD1Q16881 649 aa14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 ALS2Q96Q42 1657 aa14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 CRYBG1Q9Y4K1 1723 aa14.09□□□□□ -0.15
UBE2D3-205ENST00000350435 TRPM3Q9HCF6 1732 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-205ENST00000350435 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
UBE2D3-205ENST00000350435 TOMM70O94826 608 aa14.08□□□□□ -0.16
UBE2D3-205ENST00000350435 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
UBE2D3-205ENST00000350435 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
UBE2D3-205ENST00000350435 TNS2Q63HR2 1409 aa14.07□□□□□ -0.16
UBE2D3-205ENST00000350435 ARHGEF28Q8N1W1 1705 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-205ENST00000350435 HTRA3P83110 453 aa14.05□□□□□ -0.16
UBE2D3-205ENST00000350435 CHRNA2Q15822 529 aa14.05□□□□□ -0.16
UBE2D3-205ENST00000350435 FAM161AQ3B820 660 aa14.05□□□□□ -0.16
UBE2D3-205ENST00000350435 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
UBE2D3-205ENST00000350435 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
UBE2D3-205ENST00000350435 COL24A1Q17RW2 1714 aa14.04□□□□□ -0.16
UBE2D3-205ENST00000350435 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
UBE2D3-205ENST00000350435 THRAP3Q9Y2W1 955 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-205ENST00000350435 KIAA0232Q92628 1395 aa14.04□□□□□ -0.16
UBE2D3-205ENST00000350435 HSPA1AP0DMV8 641 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-205ENST00000350435 HSPA1BP0DMV9 641 aaKnown RBP14.03□□□□□ -0.16
UBE2D3-205ENST00000350435 CNKSR2Q8WXI2 1034 aa14.03□□□□□ -0.16
UBE2D3-205ENST00000350435 ATP7BP35670 1465 aa14.03□□□□□ -0.16
UBE2D3-205ENST00000350435 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.17
UBE2D3-205ENST00000350435 STK26Q9P289 416 aa14.02□□□□□ -0.17
UBE2D3-205ENST00000350435 AKAP12Q02952 1782 aa14.01□□□□□ -0.17
UBE2D3-205ENST00000350435 PMFBP1Q8TBY8 1022 aa14.01□□□□□ -0.17
UBE2D3-205ENST00000350435 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
UBE2D3-205ENST00000350435 LARP1Q6PKG0 1096 aaKnown RBP14□□□□□ -0.17
UBE2D3-205ENST00000350435 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
UBE2D3-205ENST00000350435 PLEKHH1Q9ULM0 1364 aa13.99□□□□□ -0.17
UBE2D3-205ENST00000350435 KANK4Q5T7N3 995 aaPredicted RBP13.99□□□□□ -0.17
UBE2D3-205ENST00000350435 LRRC37A3O60309 1634 aa13.99□□□□□ -0.17
UBE2D3-205ENST00000350435 PHRF1Q9P1Y6 1649 aaKnown RBP13.99□□□□□ -0.17
UBE2D3-205ENST00000350435 TULP4Q9NRJ4 1543 aa13.99□□□□□ -0.17
UBE2D3-205ENST00000350435 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
UBE2D3-205ENST00000350435 PAPPAQ13219 1627 aa13.98□□□□□ -0.17
UBE2D3-205ENST00000350435 ZC3H6P61129 1189 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-205ENST00000350435 DDB1Q16531 1140 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms