RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 TPM4P67936 248 aa18.3■□□□□ 0.52
COG3-201ENST00000349995 RUNDC1Q96C34 613 aa18.3■□□□□ 0.52
COG3-201ENST00000349995 EIF4G3O43432 1585 aaKnown RBP18.3■□□□□ 0.52
COG3-201ENST00000349995 TRIM5Q9C035 493 aa18.3■□□□□ 0.52
COG3-201ENST00000349995 HMOX1P09601 288 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
COG3-201ENST00000349995 TNPO1Q92973 898 aaKnown RBP18.29■□□□□ 0.52
COG3-201ENST00000349995 ATP6V1DQ9Y5K8 247 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 MAGI3Q5TCQ9 1506 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 AMPHP49418 695 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 RIPK4P57078 832 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
COG3-201ENST00000349995 TIGD1Q96MW7 591 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 CCDC94Q9BW85 323 aaPredicted RBP18.29■□□□□ 0.52
COG3-201ENST00000349995 DEF6Q9H4E7 631 aa18.29■□□□□ 0.52
COG3-201ENST00000349995 GTPBP4Q9BZE4 634 aaKnown RBP18.27■□□□□ 0.52
COG3-201ENST00000349995 CD109Q6YHK3 1445 aa18.27■□□□□ 0.52
COG3-201ENST00000349995 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
COG3-201ENST00000349995 FAM177BA6PVY3 158 aa18.27■□□□□ 0.52
COG3-201ENST00000349995 FBXW7Q969H0 707 aa18.27■□□□□ 0.52
COG3-201ENST00000349995 HSP90B1P14625 803 aaKnown RBP18.26■□□□□ 0.51
COG3-201ENST00000349995 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
COG3-201ENST00000349995 H0YHG0 523 aa18.26■□□□□ 0.51
COG3-201ENST00000349995 GTF2F1P35269 517 aaKnown RBP eCLIP18.26■□□□□ 0.51
COG3-201ENST00000349995 K7ELQ4 463 aaPredicted RBP18.25■□□□□ 0.51
COG3-201ENST00000349995 LEKR1Q6ZMV7 388 aa18.25■□□□□ 0.51
COG3-201ENST00000349995 RILPL2Q969X0 211 aa18.25■□□□□ 0.51
COG3-201ENST00000349995 HSP90B2PQ58FF3 399 aa18.25■□□□□ 0.51
COG3-201ENST00000349995 TPM3P06753 285 aa18.24■□□□□ 0.51
COG3-201ENST00000349995 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
COG3-201ENST00000349995 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
COG3-201ENST00000349995 TXNDC2Q86VQ3 553 aa18.24■□□□□ 0.51
COG3-201ENST00000349995 CALRP27797 417 aaKnown RBP18.24■□□□□ 0.51
COG3-201ENST00000349995 IPO4Q8TEX9 1081 aaKnown RBP18.24■□□□□ 0.51
COG3-201ENST00000349995 DNAJC2Q99543 621 aaKnown RBP18.24■□□□□ 0.51
COG3-201ENST00000349995 TSPYL1Q9H0U9 437 aa18.24■□□□□ 0.51
COG3-201ENST00000349995 SAMD9Q5K651 1589 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
COG3-201ENST00000349995 REC8O95072 547 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 SLC52A1Q9NWF4 448 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 SSFA2P28290 1259 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 TNNT1P13805 278 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
COG3-201ENST00000349995 DISP3Q9P2K9 1392 aa18.22■□□□□ 0.51
COG3-201ENST00000349995 FANCAO15360 1455 aa18.22■□□□□ 0.51
COG3-201ENST00000349995 SYCP2Q9BX26 1530 aa18.22■□□□□ 0.51
COG3-201ENST00000349995 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
COG3-201ENST00000349995 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
COG3-201ENST00000349995 NUP160Q12769 1436 aa18.21■□□□□ 0.51
COG3-201ENST00000349995 ZNF830Q96NB3 372 aaPredicted RBP18.21■□□□□ 0.51
COG3-201ENST00000349995 KIF20AO95235 890 aa18.21■□□□□ 0.51
COG3-201ENST00000349995 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
COG3-201ENST00000349995 IDI1Q13907 227 aa18.2■□□□□ 0.5
COG3-201ENST00000349995 FBXO31Q5XUX0 539 aaPredicted RBP18.2■□□□□ 0.5
COG3-201ENST00000349995 AK7Q96M32 723 aa18.2■□□□□ 0.5
COG3-201ENST00000349995 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
COG3-201ENST00000349995 FIBPO43427 364 aa18.2■□□□□ 0.5
COG3-201ENST00000349995 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
COG3-201ENST00000349995 POLR3GO15318 223 aaPredicted RBP18.2■□□□□ 0.5
COG3-201ENST00000349995 ZFP91Q96JP5 570 aaPredicted RBP18.2■□□□□ 0.5
COG3-201ENST00000349995 ANO2Q9NQ90 1003 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 PBRM1Q86U86 1689 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 USP25Q9UHP3 1055 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 PLCH2O75038 1416 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 RDXP35241 583 aaKnown RBP18.19■□□□□ 0.5
COG3-201ENST00000349995 NEK4P51957 841 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 C8orf34Q49A92 452 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 CDK19Q9BWU1 502 aa18.19■□□□□ 0.5
COG3-201ENST00000349995 CREBRFQ8IUR6 639 aa18.18■□□□□ 0.5
COG3-201ENST00000349995 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
COG3-201ENST00000349995 LMOD3Q0VAK6 560 aa18.18■□□□□ 0.5
COG3-201ENST00000349995 ZKSCAN5Q9Y2L8 839 aa18.17■□□□□ 0.5
COG3-201ENST00000349995 PZPP20742 1482 aa18.17■□□□□ 0.5
COG3-201ENST00000349995 NUTM2GQ5VZR2 741 aa18.17■□□□□ 0.5
COG3-201ENST00000349995 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
COG3-201ENST00000349995 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
COG3-201ENST00000349995 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
COG3-201ENST00000349995 SF3A1Q15459 793 aaKnown RBP18.17■□□□□ 0.5
COG3-201ENST00000349995 TSR2Q969E8 191 aaKnown RBP18.17■□□□□ 0.5
COG3-201ENST00000349995 PRIMPOLQ96LW4 560 aa18.16■□□□□ 0.5
COG3-201ENST00000349995 MCM5P33992 734 aa18.16■□□□□ 0.5
COG3-201ENST00000349995 GTF2A1P52655 376 aaPredicted RBP18.16■□□□□ 0.5
COG3-201ENST00000349995 C16orf45Q96MC5 204 aaPredicted RBP18.16■□□□□ 0.5
COG3-201ENST00000349995 CDC45O75419 566 aa18.15■□□□□ 0.5
COG3-201ENST00000349995 RBM27Q9P2N5 1060 aaKnown RBP18.15■□□□□ 0.5
COG3-201ENST00000349995 INTS3Q68E01 1043 aaKnown RBP18.15■□□□□ 0.5
COG3-201ENST00000349995 SLC26A8Q96RN1 970 aa18.15■□□□□ 0.5
COG3-201ENST00000349995 TOMM22Q9NS69 142 aa18.15■□□□□ 0.5
COG3-201ENST00000349995 HMMRO75330 724 aa18.14■□□□□ 0.5
COG3-201ENST00000349995 CSB-PGBD3P0DP91 1061 aa18.14■□□□□ 0.5
COG3-201ENST00000349995 RABEP1Q15276 862 aa18.14■□□□□ 0.5
COG3-201ENST00000349995 WAPLQ7Z5K2 1190 aa18.14■□□□□ 0.5
COG3-201ENST00000349995 SMC3Q9UQE7 1217 aa18.14■□□□□ 0.5
COG3-201ENST00000349995 DHX29Q7Z478 1369 aaKnown RBP18.14■□□□□ 0.49
COG3-201ENST00000349995 PRKAR2BP31323 418 aa18.13■□□□□ 0.49
COG3-201ENST00000349995 IBSPP21815 317 aaPredicted RBP18.13■□□□□ 0.49
COG3-201ENST00000349995 TSC1Q92574 1164 aa18.13■□□□□ 0.49
COG3-201ENST00000349995 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
COG3-201ENST00000349995 EXOSC9Q06265 439 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms