RNA–Protein interactions for RNA: ENST00000348795.8

SNCG-201, Transcript of synuclein gamma, humanhuman

TSL 2 BASIC

Gene SNCG, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-201ENST00000348795 RGPD8O14715 1765 aaPredicted RBP24.66■■□□□ 1.54
SNCG-201ENST00000348795 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
SNCG-201ENST00000348795 NRKQ7Z2Y5 1582 aa24.65■■□□□ 1.54
SNCG-201ENST00000348795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.64■■□□□ 1.54
SNCG-201ENST00000348795 GGNBP2Q9H3C7 697 aa24.64■■□□□ 1.54
SNCG-201ENST00000348795 KIF1AQ12756 1690 aa24.64■■□□□ 1.53
SNCG-201ENST00000348795 SSH2Q76I76 1423 aa24.63■■□□□ 1.53
SNCG-201ENST00000348795 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
SNCG-201ENST00000348795 PMFBP1Q8TBY8 1022 aa24.62■■□□□ 1.53
SNCG-201ENST00000348795 WDR43Q15061 677 aaKnown RBP eCLIP24.61■■□□□ 1.53
SNCG-201ENST00000348795 AATKQ6ZMQ8 1374 aa24.61■■□□□ 1.53
SNCG-201ENST00000348795 LRRC7Q96NW7 1537 aa24.61■■□□□ 1.53
SNCG-201ENST00000348795 C1orf167Q5SNV9 1468 aa24.59■■□□□ 1.53
SNCG-201ENST00000348795 RBM33Q96EV2 1170 aaKnown RBP24.59■■□□□ 1.53
SNCG-201ENST00000348795 USP31Q70CQ4 1352 aa24.58■■□□□ 1.53
SNCG-201ENST00000348795 MTHFSP49914 203 aa24.57■■□□□ 1.52
SNCG-201ENST00000348795 ZNF335Q9H4Z2 1342 aaPredicted RBP24.57■■□□□ 1.52
SNCG-201ENST00000348795 MST1RQ04912 1400 aa24.56■■□□□ 1.52
SNCG-201ENST00000348795 HNRNPUQ00839 825 aaKnown RBP eCLIP24.56■■□□□ 1.52
SNCG-201ENST00000348795 PSME1Q06323 249 aa24.56■■□□□ 1.52
SNCG-201ENST00000348795 NME9Q86XW9 330 aa24.56■■□□□ 1.52
SNCG-201ENST00000348795 NUDCQ9Y266 331 aa24.55■■□□□ 1.52
SNCG-201ENST00000348795 TNNT2P45379 298 aaPredicted RBP24.54■■□□□ 1.52
SNCG-201ENST00000348795 USP54Q70EL1 1684 aa24.53■■□□□ 1.52
SNCG-201ENST00000348795 OVOS2A0A0J9YW53 1432 aa24.52■■□□□ 1.52
SNCG-201ENST00000348795 OVOS2Q6IE36 1432 aa24.52■■□□□ 1.52
SNCG-201ENST00000348795 XIRP1Q702N8 1843 aaKnown RBP24.52■■□□□ 1.52
SNCG-201ENST00000348795 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
SNCG-201ENST00000348795 ZBED9Q6R2W3 1325 aa24.5■■□□□ 1.51
SNCG-201ENST00000348795 SMG6Q86US8 1419 aaKnown RBP24.5■■□□□ 1.51
SNCG-201ENST00000348795 PNNQ9H307 717 aaKnown RBP24.49■■□□□ 1.51
SNCG-201ENST00000348795 PNPLA6Q8IY17 1366 aa24.49■■□□□ 1.51
SNCG-201ENST00000348795 NPHP3Q7Z494 1330 aa24.48■■□□□ 1.51
SNCG-201ENST00000348795 ABTB2Q8N961 1025 aa24.48■■□□□ 1.51
SNCG-201ENST00000348795 ORAI2Q96SN7 254 aa24.48■■□□□ 1.51
SNCG-201ENST00000348795 BLMP54132 1417 aaPredicted RBP24.47■■□□□ 1.51
SNCG-201ENST00000348795 KIF24Q5T7B8 1368 aa24.47■■□□□ 1.51
SNCG-201ENST00000348795 PAK3O75914 559 aaPredicted RBP24.46■■□□□ 1.51
SNCG-201ENST00000348795 NLRP6P59044 892 aa24.46■■□□□ 1.51
SNCG-201ENST00000348795 POLKQ9UBT6 870 aa24.46■■□□□ 1.51
SNCG-201ENST00000348795 CDK12Q9NYV4 1490 aaPredicted RBP24.45■■□□□ 1.51
SNCG-201ENST00000348795 MAP2P11137 1827 aaKnown RBP24.45■■□□□ 1.5
SNCG-201ENST00000348795 ADAMTS8Q9UP79 889 aa24.45■■□□□ 1.5
SNCG-201ENST00000348795 PIK3C2AO00443 1686 aa24.44■■□□□ 1.5
SNCG-201ENST00000348795 FOXO3O43524 673 aa24.44■■□□□ 1.5
SNCG-201ENST00000348795 DIAPH1O60610 1272 aaKnown RBP24.44■■□□□ 1.5
SNCG-201ENST00000348795 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
SNCG-201ENST00000348795 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
SNCG-201ENST00000348795 KCNH5Q8NCM2 988 aa24.43■■□□□ 1.5
SNCG-201ENST00000348795 SLAIN2Q9P270 581 aa24.43■■□□□ 1.5
SNCG-201ENST00000348795 NCBP3Q53F19 620 aaKnown RBP24.4■■□□□ 1.5
SNCG-201ENST00000348795 ZRANB1Q9UGI0 708 aa24.4■■□□□ 1.5
SNCG-201ENST00000348795 SHPRHQ149N8 1683 aa24.39■■□□□ 1.49
SNCG-201ENST00000348795 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
SNCG-201ENST00000348795 PDE3BQ13370 1112 aa24.38■■□□□ 1.49
SNCG-201ENST00000348795 TRPM3Q9HCF6 1732 aaPredicted RBP24.38■■□□□ 1.49
SNCG-201ENST00000348795 LTBP4Q8N2S1 1624 aa24.37■■□□□ 1.49
SNCG-201ENST00000348795 PPM1GO15355 546 aaPredicted RBP24.36■■□□□ 1.49
SNCG-201ENST00000348795 ARHGEF10O15013 1369 aa24.35■■□□□ 1.49
SNCG-201ENST00000348795 RUNDC1Q96C34 613 aa24.35■■□□□ 1.49
SNCG-201ENST00000348795 RTL1A6NKG5 1358 aa24.34■■□□□ 1.49
SNCG-201ENST00000348795 FLT4P35916 1363 aa24.34■■□□□ 1.49
SNCG-201ENST00000348795 NEFMP07197 916 aa24.34■■□□□ 1.49
SNCG-201ENST00000348795 U2AF1L5P0DN76 240 aaPredicted RBP24.34■■□□□ 1.49
SNCG-201ENST00000348795 U2AF1Q01081 240 aaKnown RBP eCLIP24.34■■□□□ 1.49
SNCG-201ENST00000348795 BRINP3Q76B58 766 aa24.34■■□□□ 1.49
SNCG-201ENST00000348795 FCHSD2O94868 740 aa24.33■■□□□ 1.49
SNCG-201ENST00000348795 EMILIN1Q9Y6C2 1016 aa24.33■■□□□ 1.49
SNCG-201ENST00000348795 U2SURPO15042 1029 aaKnown RBP24.31■■□□□ 1.48
SNCG-201ENST00000348795 AMPHP49418 695 aa24.31■■□□□ 1.48
SNCG-201ENST00000348795 RRS1Q15050 365 aaKnown RBP24.31■■□□□ 1.48
SNCG-201ENST00000348795 ALS2Q96Q42 1657 aa24.3■■□□□ 1.48
SNCG-201ENST00000348795 SLIT3O75094 1523 aa24.3■■□□□ 1.48
SNCG-201ENST00000348795 MARF1Q9Y4F3 1742 aaKnown RBP24.3■■□□□ 1.48
SNCG-201ENST00000348795 TNS3Q68CZ2 1445 aa24.3■■□□□ 1.48
SNCG-201ENST00000348795 USP19O94966 1318 aa24.3■■□□□ 1.48
SNCG-201ENST00000348795 PXDNQ92626 1479 aa24.29■■□□□ 1.48
SNCG-201ENST00000348795 MAP3K19Q56UN5 1328 aa24.29■■□□□ 1.48
SNCG-201ENST00000348795 IL13P35225 146 aa24.28■■□□□ 1.48
SNCG-201ENST00000348795 SOS2Q07890 1332 aaPredicted RBP24.28■■□□□ 1.48
SNCG-201ENST00000348795 LMOD2Q6P5Q4 547 aa24.27■■□□□ 1.48
SNCG-201ENST00000348795 SPATA31A3Q5VYP0 1347 aa24.27■■□□□ 1.48
SNCG-201ENST00000348795 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
SNCG-201ENST00000348795 PHRF1Q9P1Y6 1649 aaKnown RBP24.27■■□□□ 1.48
SNCG-201ENST00000348795 IQSEC2Q5JU85 1478 aa24.26■■□□□ 1.47
SNCG-201ENST00000348795 GCP02774 474 aa24.25■■□□□ 1.47
SNCG-201ENST00000348795 NUTM2GQ5VZR2 741 aa24.25■■□□□ 1.47
SNCG-201ENST00000348795 NFAT5O94916 1531 aa24.25■■□□□ 1.47
SNCG-201ENST00000348795 FBLN1P23142 703 aa24.24■■□□□ 1.47
SNCG-201ENST00000348795 XPCQ01831 940 aaPredicted RBP24.24■■□□□ 1.47
SNCG-201ENST00000348795 NHSL1Q5SYE7 1610 aa24.24■■□□□ 1.47
SNCG-201ENST00000348795 TOM1O60784 492 aa24.23■■□□□ 1.47
SNCG-201ENST00000348795 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
SNCG-201ENST00000348795 IP6K1Q92551 441 aa24.23■■□□□ 1.47
SNCG-201ENST00000348795 MED1Q15648 1581 aaPredicted RBP24.22■■□□□ 1.47
SNCG-201ENST00000348795 APAF1O14727 1248 aa24.22■■□□□ 1.47
SNCG-201ENST00000348795 SOX12O15370 315 aa24.21■■□□□ 1.47
SNCG-201ENST00000348795 HOXC9P31274 260 aa24.21■■□□□ 1.47
SNCG-201ENST00000348795 EIF4A2Q14240 407 aaKnown RBP24.21■■□□□ 1.47
SNCG-201ENST00000348795 ILDR1Q86SU0 546 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms