RNA–Protein interactions for RNA: ENST00000348721.3

CISH-201, Transcript of cytokine inducible SH2 containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CISH, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-201ENST00000348721 TBX22Q9Y458 520 aa21.05■□□□□ 0.96
CISH-201ENST00000348721 PLIN1O60240 522 aa21.04■□□□□ 0.96
CISH-201ENST00000348721 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
CISH-201ENST00000348721 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
CISH-201ENST00000348721 EDC4Q6P2E9 1401 aaKnown RBP21.04■□□□□ 0.96
CISH-201ENST00000348721 NKTRP30414 1462 aaKnown RBP21.04■□□□□ 0.96
CISH-201ENST00000348721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
CISH-201ENST00000348721 PTPRUQ92729 1446 aa21.02■□□□□ 0.96
CISH-201ENST00000348721 WDR63Q8IWG1 891 aa21.02■□□□□ 0.96
CISH-201ENST00000348721 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
CISH-201ENST00000348721 ADGRB2O60241 1585 aa21.01■□□□□ 0.95
CISH-201ENST00000348721 CDC42BPGQ6DT37 1551 aa21.01■□□□□ 0.95
CISH-201ENST00000348721 PRR36Q9H6K5 1346 aa21.01■□□□□ 0.95
CISH-201ENST00000348721 ZNF692Q9BU19 519 aaPredicted RBP21■□□□□ 0.95
CISH-201ENST00000348721 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.99■□□□□ 0.95
CISH-201ENST00000348721 PLEKHF1Q96S99 279 aa20.99■□□□□ 0.95
CISH-201ENST00000348721 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
CISH-201ENST00000348721 NCKAP5LQ9HCH0 1330 aa20.99■□□□□ 0.95
CISH-201ENST00000348721 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
CISH-201ENST00000348721 DIAPH1O60610 1272 aaKnown RBP20.98■□□□□ 0.95
CISH-201ENST00000348721 NEUROD2Q15784 382 aa20.98■□□□□ 0.95
CISH-201ENST00000348721 POLKQ9UBT6 870 aa20.98■□□□□ 0.95
CISH-201ENST00000348721 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.97■□□□□ 0.95
CISH-201ENST00000348721 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
CISH-201ENST00000348721 CRBNQ96SW2 442 aa20.97■□□□□ 0.95
CISH-201ENST00000348721 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
CISH-201ENST00000348721 PLEKHG3A1L390 1219 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 U2SURPO15042 1029 aaKnown RBP20.95■□□□□ 0.94
CISH-201ENST00000348721 C20orf194Q5TEA3 1177 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 NME9Q86XW9 330 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 AKAP12Q02952 1782 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 PTCH1Q13635 1447 aa20.95■□□□□ 0.94
CISH-201ENST00000348721 AATKQ6ZMQ8 1374 aa20.94■□□□□ 0.94
CISH-201ENST00000348721 ANP32AP39687 249 aaKnown RBP20.94■□□□□ 0.94
CISH-201ENST00000348721 PNNQ9H307 717 aaKnown RBP20.92■□□□□ 0.94
CISH-201ENST00000348721 FBLN1P23142 703 aa20.92■□□□□ 0.94
CISH-201ENST00000348721 FCHSD2O94868 740 aa20.91■□□□□ 0.94
CISH-201ENST00000348721 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
CISH-201ENST00000348721 RTL5Q5HYW3 569 aaPredicted RBP20.91■□□□□ 0.94
CISH-201ENST00000348721 COG3Q96JB2 828 aa20.91■□□□□ 0.94
CISH-201ENST00000348721 ZRANB1Q9UGI0 708 aa20.91■□□□□ 0.94
CISH-201ENST00000348721 CEP170BQ9Y4F5 1589 aaPredicted RBP20.91■□□□□ 0.94
CISH-201ENST00000348721 MAP2P11137 1827 aaKnown RBP20.91■□□□□ 0.94
CISH-201ENST00000348721 TOPAZ1Q8N9V7 1692 aa20.91■□□□□ 0.94
CISH-201ENST00000348721 ITSN1Q15811 1721 aa20.9■□□□□ 0.94
CISH-201ENST00000348721 BCAR3O75815 825 aa20.9■□□□□ 0.94
CISH-201ENST00000348721 IPO9Q96P70 1041 aaKnown RBP20.9■□□□□ 0.94
CISH-201ENST00000348721 ACEP12821 1306 aa20.89■□□□□ 0.93
CISH-201ENST00000348721 PIK3R4Q99570 1358 aa20.88■□□□□ 0.93
CISH-201ENST00000348721 MYH16Q9H6N6 1097 aa20.88■□□□□ 0.93
CISH-201ENST00000348721 TRIM35Q9UPQ4 493 aa20.88■□□□□ 0.93
CISH-201ENST00000348721 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
CISH-201ENST00000348721 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
CISH-201ENST00000348721 RIMS1Q86UR5 1692 aaKnown RBP20.87■□□□□ 0.93
CISH-201ENST00000348721 EMILIN1Q9Y6C2 1016 aa20.87■□□□□ 0.93
CISH-201ENST00000348721 CDK12Q9NYV4 1490 aaPredicted RBP20.87■□□□□ 0.93
CISH-201ENST00000348721 PPM1GO15355 546 aaPredicted RBP20.87■□□□□ 0.93
CISH-201ENST00000348721 XRN1Q8IZH2 1706 aaKnown RBP20.86■□□□□ 0.93
CISH-201ENST00000348721 IL13P35225 146 aa20.85■□□□□ 0.93
CISH-201ENST00000348721 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
CISH-201ENST00000348721 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
CISH-201ENST00000348721 USP6P35125 1406 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 ADAMTSL3P82987 1691 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 IL16Q14005 1332 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 NRKQ7Z2Y5 1582 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 RARSP54136 660 aaKnown RBP20.84■□□□□ 0.93
CISH-201ENST00000348721 PDE3AQ14432 1141 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 NBR1Q14596 966 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 SSH2Q76I76 1423 aa20.84■□□□□ 0.93
CISH-201ENST00000348721 NUTM2FA1L443 756 aa20.83■□□□□ 0.92
CISH-201ENST00000348721 PAK3O75914 559 aaPredicted RBP20.82■□□□□ 0.92
CISH-201ENST00000348721 RIPK4P57078 832 aa20.82■□□□□ 0.92
CISH-201ENST00000348721 PRKCSHP14314 528 aaPredicted RBP20.82■□□□□ 0.92
CISH-201ENST00000348721 KCNA6P17658 529 aa20.82■□□□□ 0.92
CISH-201ENST00000348721 ANKLE2Q86XL3 938 aa20.82■□□□□ 0.92
CISH-201ENST00000348721 CT47B1P0C2W7 299 aaPredicted RBP20.81■□□□□ 0.92
CISH-201ENST00000348721 PRKAR2BP31323 418 aa20.81■□□□□ 0.92
CISH-201ENST00000348721 LRRC7Q96NW7 1537 aa20.81■□□□□ 0.92
CISH-201ENST00000348721 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
CISH-201ENST00000348721 OVOS2A0A0J9YW53 1432 aa20.8■□□□□ 0.92
CISH-201ENST00000348721 OVOS2Q6IE36 1432 aa20.8■□□□□ 0.92
CISH-201ENST00000348721 ZNF142P52746 1687 aaPredicted RBP20.8■□□□□ 0.92
CISH-201ENST00000348721 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
CISH-201ENST00000348721 TTC21AQ8NDW8 1320 aa20.78■□□□□ 0.92
CISH-201ENST00000348721 KDM2BQ8NHM5 1336 aa20.78■□□□□ 0.92
CISH-201ENST00000348721 USP31Q70CQ4 1352 aa20.78■□□□□ 0.92
CISH-201ENST00000348721 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
CISH-201ENST00000348721 NEFMP07197 916 aa20.77■□□□□ 0.92
CISH-201ENST00000348721 ANKARQ7Z5J8 1434 aa20.77■□□□□ 0.92
CISH-201ENST00000348721 PHACTR3Q96KR7 559 aa20.77■□□□□ 0.91
CISH-201ENST00000348721 HMOX1P09601 288 aa20.75■□□□□ 0.91
CISH-201ENST00000348721 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
CISH-201ENST00000348721 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
CISH-201ENST00000348721 CENPQQ7L2Z9 268 aaPredicted RBP20.75■□□□□ 0.91
CISH-201ENST00000348721 TSR2Q969E8 191 aaKnown RBP20.75■□□□□ 0.91
CISH-201ENST00000348721 USP35Q9P2H5 1018 aa20.74■□□□□ 0.91
CISH-201ENST00000348721 NALCNQ8IZF0 1738 aa20.74■□□□□ 0.91
CISH-201ENST00000348721 NGDNQ8NEJ9 315 aaKnown RBP20.73■□□□□ 0.91
CISH-201ENST00000348721 EXOSC9Q06265 439 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms