RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
CHRNA3-202ENST00000348639 RRP7AQ9Y3A4 280 aaKnown RBP26.59■■□□□ 1.85
CHRNA3-202ENST00000348639 SLIT1O75093 1534 aa26.58■■□□□ 1.85
CHRNA3-202ENST00000348639 CCDC61Q9Y6R9 512 aa26.58■■□□□ 1.85
CHRNA3-202ENST00000348639 NCKAP5LQ9HCH0 1330 aa26.58■■□□□ 1.85
CHRNA3-202ENST00000348639 C20orf194Q5TEA3 1177 aa26.58■■□□□ 1.85
CHRNA3-202ENST00000348639 ADGRB2O60241 1585 aa26.58■■□□□ 1.84
CHRNA3-202ENST00000348639 ARHGAP23Q9P227 1491 aa26.57■■□□□ 1.84
CHRNA3-202ENST00000348639 CDC42BPGQ6DT37 1551 aa26.56■■□□□ 1.84
CHRNA3-202ENST00000348639 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
CHRNA3-202ENST00000348639 PLEKHF1Q96S99 279 aa26.54■■□□□ 1.84
CHRNA3-202ENST00000348639 DIAPH1O60610 1272 aaKnown RBP26.53■■□□□ 1.84
CHRNA3-202ENST00000348639 PTPRUQ92729 1446 aa26.52■■□□□ 1.84
CHRNA3-202ENST00000348639 AMOTL2Q9Y2J4 779 aa26.51■■□□□ 1.83
CHRNA3-202ENST00000348639 POLKQ9UBT6 870 aa26.5■■□□□ 1.83
CHRNA3-202ENST00000348639 BCAR3O75815 825 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 ZNF692Q9BU19 519 aaPredicted RBP26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 PRR36Q9H6K5 1346 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 MON2Q7Z3U7 1717 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 NUTM2FA1L443 756 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 FBLN1P23142 703 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
CHRNA3-202ENST00000348639 PPM1GO15355 546 aaPredicted RBP26.48■■□□□ 1.83
CHRNA3-202ENST00000348639 FANCIQ9NVI1 1328 aa26.48■■□□□ 1.83
CHRNA3-202ENST00000348639 NME9Q86XW9 330 aa26.48■■□□□ 1.83
CHRNA3-202ENST00000348639 PNNQ9H307 717 aaKnown RBP26.48■■□□□ 1.83
CHRNA3-202ENST00000348639 AKAP12Q02952 1782 aa26.47■■□□□ 1.83
CHRNA3-202ENST00000348639 RIMS1Q86UR5 1692 aaKnown RBP26.47■■□□□ 1.83
CHRNA3-202ENST00000348639 MAPK8IP3Q9UPT6 1336 aa26.46■■□□□ 1.83
CHRNA3-202ENST00000348639 TMPOP42166 694 aaKnown RBP26.46■■□□□ 1.83
CHRNA3-202ENST00000348639 MYH16Q9H6N6 1097 aa26.46■■□□□ 1.83
CHRNA3-202ENST00000348639 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.83
CHRNA3-202ENST00000348639 ITSN1Q15811 1721 aa26.45■■□□□ 1.82
CHRNA3-202ENST00000348639 ZRANB1Q9UGI0 708 aa26.44■■□□□ 1.82
CHRNA3-202ENST00000348639 CEP170BQ9Y4F5 1589 aaPredicted RBP26.43■■□□□ 1.82
CHRNA3-202ENST00000348639 DIP2AQ14689 1571 aa26.43■■□□□ 1.82
CHRNA3-202ENST00000348639 FCHSD2O94868 740 aa26.43■■□□□ 1.82
CHRNA3-202ENST00000348639 COG3Q96JB2 828 aa26.43■■□□□ 1.82
CHRNA3-202ENST00000348639 MAP2P11137 1827 aaKnown RBP26.42■■□□□ 1.82
CHRNA3-202ENST00000348639 PTCH1Q13635 1447 aa26.42■■□□□ 1.82
CHRNA3-202ENST00000348639 PDE3AQ14432 1141 aa26.41■■□□□ 1.82
CHRNA3-202ENST00000348639 TOPAZ1Q8N9V7 1692 aa26.41■■□□□ 1.82
CHRNA3-202ENST00000348639 PLEKHG3A1L390 1219 aa26.41■■□□□ 1.82
CHRNA3-202ENST00000348639 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
CHRNA3-202ENST00000348639 RARSP54136 660 aaKnown RBP26.4■■□□□ 1.82
CHRNA3-202ENST00000348639 TRIM35Q9UPQ4 493 aa26.4■■□□□ 1.82
CHRNA3-202ENST00000348639 CDK12Q9NYV4 1490 aaPredicted RBP26.39■■□□□ 1.82
CHRNA3-202ENST00000348639 EMILIN1Q9Y6C2 1016 aa26.38■■□□□ 1.81
CHRNA3-202ENST00000348639 ACEP12821 1306 aa26.38■■□□□ 1.81
CHRNA3-202ENST00000348639 KDM2BQ8NHM5 1336 aa26.37■■□□□ 1.81
CHRNA3-202ENST00000348639 IL16Q14005 1332 aa26.37■■□□□ 1.81
CHRNA3-202ENST00000348639 RSPH6AQ9H0K4 717 aa26.36■■□□□ 1.81
CHRNA3-202ENST00000348639 LRRC7Q96NW7 1537 aa26.36■■□□□ 1.81
CHRNA3-202ENST00000348639 ADAMTSL3P82987 1691 aa26.35■■□□□ 1.81
CHRNA3-202ENST00000348639 RIPK4P57078 832 aa26.35■■□□□ 1.81
CHRNA3-202ENST00000348639 CENPQQ7L2Z9 268 aaPredicted RBP26.35■■□□□ 1.81
CHRNA3-202ENST00000348639 NRKQ7Z2Y5 1582 aa26.35■■□□□ 1.81
CHRNA3-202ENST00000348639 CT47B1P0C2W7 299 aaPredicted RBP26.34■■□□□ 1.81
CHRNA3-202ENST00000348639 IL13P35225 146 aa26.34■■□□□ 1.81
CHRNA3-202ENST00000348639 TTC21BQ7Z4L5 1316 aa26.34■■□□□ 1.81
CHRNA3-202ENST00000348639 CANXP27824 592 aaKnown RBP26.33■■□□□ 1.81
CHRNA3-202ENST00000348639 MS4A1P11836 297 aa26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 KCNA6P17658 529 aa26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 PRKAR2BP31323 418 aa26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 RRS1Q15050 365 aaKnown RBP26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 USP6P35125 1406 aa26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 ANKLE2Q86XL3 938 aa26.32■■□□□ 1.8
CHRNA3-202ENST00000348639 NEFMP07197 916 aa26.31■■□□□ 1.8
CHRNA3-202ENST00000348639 XRN1Q8IZH2 1706 aaKnown RBP26.31■■□□□ 1.8
CHRNA3-202ENST00000348639 PMFBP1Q8TBY8 1022 aa26.31■■□□□ 1.8
CHRNA3-202ENST00000348639 PIK3R4Q99570 1358 aa26.3■■□□□ 1.8
CHRNA3-202ENST00000348639 TSR2Q969E8 191 aaKnown RBP26.29■■□□□ 1.8
CHRNA3-202ENST00000348639 FRAT1Q92837 279 aaPredicted RBP26.28■■□□□ 1.8
CHRNA3-202ENST00000348639 OVOS2A0A0J9YW53 1432 aa26.28■■□□□ 1.8
CHRNA3-202ENST00000348639 OVOS2Q6IE36 1432 aa26.28■■□□□ 1.8
CHRNA3-202ENST00000348639 SSH2Q76I76 1423 aa26.27■■□□□ 1.8
CHRNA3-202ENST00000348639 HMOX1P09601 288 aa26.27■■□□□ 1.8
CHRNA3-202ENST00000348639 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
CHRNA3-202ENST00000348639 EXOSC9Q06265 439 aaKnown RBP26.25■■□□□ 1.79
CHRNA3-202ENST00000348639 NFE2L2Q16236 605 aa26.25■■□□□ 1.79
CHRNA3-202ENST00000348639 NGDNQ8NEJ9 315 aaKnown RBP26.24■■□□□ 1.79
CHRNA3-202ENST00000348639 ZNF142P52746 1687 aaPredicted RBP26.24■■□□□ 1.79
CHRNA3-202ENST00000348639 PHACTR3Q96KR7 559 aa26.24■■□□□ 1.79
CHRNA3-202ENST00000348639 COG6Q9Y2V7 657 aa26.24■■□□□ 1.79
CHRNA3-202ENST00000348639 MSH5O43196 834 aa26.23■■□□□ 1.79
CHRNA3-202ENST00000348639 AAMPQ13685 434 aa26.23■■□□□ 1.79
CHRNA3-202ENST00000348639 BCL2L13Q9BXK5 485 aa26.23■■□□□ 1.79
CHRNA3-202ENST00000348639 TTC21AQ8NDW8 1320 aa26.23■■□□□ 1.79
CHRNA3-202ENST00000348639 RGPD8O14715 1765 aaPredicted RBP26.22■■□□□ 1.79
CHRNA3-202ENST00000348639 USP31Q70CQ4 1352 aa26.22■■□□□ 1.79
CHRNA3-202ENST00000348639 CLUAP1Q96AJ1 413 aa26.22■■□□□ 1.79
CHRNA3-202ENST00000348639 NALCNQ8IZF0 1738 aa26.21■■□□□ 1.79
CHRNA3-202ENST00000348639 ANKARQ7Z5J8 1434 aa26.2■■□□□ 1.78
CHRNA3-202ENST00000348639 SETD1BQ9UPS6 1966 aaKnown RBP26.2■■□□□ 1.78
CHRNA3-202ENST00000348639 PDE4AP27815 886 aa26.2■■□□□ 1.78
CHRNA3-202ENST00000348639 SOX12O15370 315 aa26.19■■□□□ 1.78
CHRNA3-202ENST00000348639 RLBP1P12271 317 aa26.18■■□□□ 1.78
CHRNA3-202ENST00000348639 CALD1Q05682 793 aaKnown RBP26.18■■□□□ 1.78
CHRNA3-202ENST00000348639 BACH2Q9BYV9 841 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms