RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 U2AF1Q01081 240 aaKnown RBP eCLIP27.72■■■□□ 2.03
PTPN18-202ENST00000347849 WWC1Q8IX03 1113 aa27.72■■■□□ 2.03
PTPN18-202ENST00000347849 PTPRUQ92729 1446 aa27.72■■■□□ 2.03
PTPN18-202ENST00000347849 PRR36Q9H6K5 1346 aa27.72■■■□□ 2.03
PTPN18-202ENST00000347849 KNDC1Q76NI1 1749 aa27.71■■■□□ 2.03
PTPN18-202ENST00000347849 NEFMP07197 916 aa27.7■■■□□ 2.03
PTPN18-202ENST00000347849 MED14O60244 1454 aa27.7■■■□□ 2.03
PTPN18-202ENST00000347849 ATP7BP35670 1465 aa27.7■■■□□ 2.03
PTPN18-202ENST00000347849 C20orf194Q5TEA3 1177 aa27.7■■■□□ 2.02
PTPN18-202ENST00000347849 SKAP1Q86WV1 359 aa27.7■■■□□ 2.02
PTPN18-202ENST00000347849 ZRANB1Q9UGI0 708 aa27.7■■■□□ 2.02
PTPN18-202ENST00000347849 EID1Q9Y6B2 187 aa27.7■■■□□ 2.02
PTPN18-202ENST00000347849 NUTM2FA1L443 756 aa27.69■■■□□ 2.02
PTPN18-202ENST00000347849 CPSF1Q10570 1443 aaKnown RBP27.69■■■□□ 2.02
PTPN18-202ENST00000347849 CRBNQ96SW2 442 aa27.68■■■□□ 2.02
PTPN18-202ENST00000347849 IQSEC2Q5JU85 1478 aa27.68■■■□□ 2.02
PTPN18-202ENST00000347849 COL3A1P02461 1466 aaPredicted RBP27.67■■■□□ 2.02
PTPN18-202ENST00000347849 ARHGAP23Q9P227 1491 aa27.67■■■□□ 2.02
PTPN18-202ENST00000347849 NME9Q86XW9 330 aa27.67■■■□□ 2.02
PTPN18-202ENST00000347849 CCDC61Q9Y6R9 512 aa27.67■■■□□ 2.02
PTPN18-202ENST00000347849 SLIT1O75093 1534 aa27.66■■■□□ 2.02
PTPN18-202ENST00000347849 ANKRD26Q9UPS8 1709 aa27.66■■■□□ 2.02
PTPN18-202ENST00000347849 U2SURPO15042 1029 aaKnown RBP27.66■■■□□ 2.02
PTPN18-202ENST00000347849 PRKCSHP14314 528 aaPredicted RBP27.66■■■□□ 2.02
PTPN18-202ENST00000347849 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.65■■■□□ 2.02
PTPN18-202ENST00000347849 E9PSI1 815 aa27.64■■■□□ 2.02
PTPN18-202ENST00000347849 THEMISQ8N1K5 641 aaPredicted RBP27.63■■■□□ 2.01
PTPN18-202ENST00000347849 AMOTL2Q9Y2J4 779 aa27.63■■■□□ 2.01
PTPN18-202ENST00000347849 PHF23Q9BUL5 403 aaPredicted RBP27.63■■■□□ 2.01
PTPN18-202ENST00000347849 KIF20BQ96Q89 1820 aa27.63■■■□□ 2.01
PTPN18-202ENST00000347849 PPM1GO15355 546 aaPredicted RBP27.62■■■□□ 2.01
PTPN18-202ENST00000347849 POLKQ9UBT6 870 aa27.62■■■□□ 2.01
PTPN18-202ENST00000347849 NGEFQ8N5V2 710 aa27.61■■■□□ 2.01
PTPN18-202ENST00000347849 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
PTPN18-202ENST00000347849 NKTRP30414 1462 aaKnown RBP27.6■■■□□ 2.01
PTPN18-202ENST00000347849 EDC4Q6P2E9 1401 aaKnown RBP27.6■■■□□ 2.01
PTPN18-202ENST00000347849 PLEKHF1Q96S99 279 aa27.59■■■□□ 2.01
PTPN18-202ENST00000347849 BCAR3O75815 825 aa27.59■■■□□ 2.01
PTPN18-202ENST00000347849 PNPLA6Q8IY17 1366 aa27.59■■■□□ 2.01
PTPN18-202ENST00000347849 TBX22Q9Y458 520 aa27.59■■■□□ 2.01
PTPN18-202ENST00000347849 CDC42BPGQ6DT37 1551 aa27.58■■■□□ 2.01
PTPN18-202ENST00000347849 EMILIN1Q9Y6C2 1016 aa27.57■■■□□ 2
PTPN18-202ENST00000347849 DIAPH1O60610 1272 aaKnown RBP27.56■■■□□ 2
PTPN18-202ENST00000347849 IL27Q8NEV9 243 aa27.56■■■□□ 2
PTPN18-202ENST00000347849 RIMS1Q86UR5 1692 aaKnown RBP27.52■■■□□ 2
PTPN18-202ENST00000347849 DDRGK1Q96HY6 314 aa27.52■■■□□ 2
PTPN18-202ENST00000347849 ACEP12821 1306 aa27.52■■■□□ 2
PTPN18-202ENST00000347849 CCDC27Q2M243 656 aa27.51■■■□□ 2
PTPN18-202ENST00000347849 ADGRB2O60241 1585 aa27.51■■□□□ 1.99
PTPN18-202ENST00000347849 RRS1Q15050 365 aaKnown RBP27.5■■□□□ 1.99
PTPN18-202ENST00000347849 WDR63Q8IWG1 891 aa27.5■■□□□ 1.99
PTPN18-202ENST00000347849 MON2Q7Z3U7 1717 aa27.5■■□□□ 1.99
PTPN18-202ENST00000347849 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
PTPN18-202ENST00000347849 CEP170BQ9Y4F5 1589 aaPredicted RBP27.49■■□□□ 1.99
PTPN18-202ENST00000347849 ZNF692Q9BU19 519 aaPredicted RBP27.48■■□□□ 1.99
PTPN18-202ENST00000347849 KCNA6P17658 529 aa27.48■■□□□ 1.99
PTPN18-202ENST00000347849 COG3Q96JB2 828 aa27.48■■□□□ 1.99
PTPN18-202ENST00000347849 TRIM35Q9UPQ4 493 aa27.48■■□□□ 1.99
PTPN18-202ENST00000347849 MAP2P11137 1827 aaKnown RBP27.47■■□□□ 1.99
PTPN18-202ENST00000347849 AKAP12Q02952 1782 aa27.46■■□□□ 1.99
PTPN18-202ENST00000347849 SLC4A3P48751 1232 aa27.46■■□□□ 1.99
PTPN18-202ENST00000347849 PMFBP1Q8TBY8 1022 aa27.46■■□□□ 1.99
PTPN18-202ENST00000347849 RTN4Q9NQC3 1192 aaKnown RBP27.46■■□□□ 1.99
PTPN18-202ENST00000347849 PLEKHG3A1L390 1219 aa27.46■■□□□ 1.99
PTPN18-202ENST00000347849 TTC21BQ7Z4L5 1316 aa27.45■■□□□ 1.99
PTPN18-202ENST00000347849 PTCH1Q13635 1447 aa27.44■■□□□ 1.98
PTPN18-202ENST00000347849 KDM2BQ8NHM5 1336 aa27.44■■□□□ 1.98
PTPN18-202ENST00000347849 HMOX1P09601 288 aa27.44■■□□□ 1.98
PTPN18-202ENST00000347849 MAPK8IP3Q9UPT6 1336 aa27.44■■□□□ 1.98
PTPN18-202ENST00000347849 ITSN1Q15811 1721 aa27.43■■□□□ 1.98
PTPN18-202ENST00000347849 TOPAZ1Q8N9V7 1692 aa27.43■■□□□ 1.98
PTPN18-202ENST00000347849 TSR2Q969E8 191 aaKnown RBP27.42■■□□□ 1.98
PTPN18-202ENST00000347849 RSPH6AQ9H0K4 717 aa27.42■■□□□ 1.98
PTPN18-202ENST00000347849 PRKAR2BP31323 418 aa27.42■■□□□ 1.98
PTPN18-202ENST00000347849 IL13P35225 146 aa27.42■■□□□ 1.98
PTPN18-202ENST00000347849 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.42■■□□□ 1.98
PTPN18-202ENST00000347849 CENPQQ7L2Z9 268 aaPredicted RBP27.41■■□□□ 1.98
PTPN18-202ENST00000347849 AATKQ6ZMQ8 1374 aa27.41■■□□□ 1.98
PTPN18-202ENST00000347849 RIPK4P57078 832 aa27.41■■□□□ 1.98
PTPN18-202ENST00000347849 RBM33Q96EV2 1170 aaKnown RBP27.41■■□□□ 1.98
PTPN18-202ENST00000347849 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
PTPN18-202ENST00000347849 LRRC7Q96NW7 1537 aa27.4■■□□□ 1.98
PTPN18-202ENST00000347849 DNAJC5Q9H3Z4 198 aa27.4■■□□□ 1.98
PTPN18-202ENST00000347849 USP6P35125 1406 aa27.4■■□□□ 1.98
PTPN18-202ENST00000347849 NCBP3Q53F19 620 aaKnown RBP27.4■■□□□ 1.98
PTPN18-202ENST00000347849 FCHSD2O94868 740 aa27.39■■□□□ 1.98
PTPN18-202ENST00000347849 BCL2L13Q9BXK5 485 aa27.39■■□□□ 1.98
PTPN18-202ENST00000347849 DAXXQ9UER7 740 aaPredicted RBP27.39■■□□□ 1.98
PTPN18-202ENST00000347849 DIP2AQ14689 1571 aa27.39■■□□□ 1.97
PTPN18-202ENST00000347849 RARSP54136 660 aaKnown RBP27.39■■□□□ 1.97
PTPN18-202ENST00000347849 XRN1Q8IZH2 1706 aaKnown RBP27.38■■□□□ 1.97
PTPN18-202ENST00000347849 ANO8Q9HCE9 1232 aaPredicted RBP27.38■■□□□ 1.97
PTPN18-202ENST00000347849 NRKQ7Z2Y5 1582 aa27.37■■□□□ 1.97
PTPN18-202ENST00000347849 NFKBIBQ15653 356 aa27.37■■□□□ 1.97
PTPN18-202ENST00000347849 ADAMTSL3P82987 1691 aa27.36■■□□□ 1.97
PTPN18-202ENST00000347849 SOX12O15370 315 aa27.36■■□□□ 1.97
PTPN18-202ENST00000347849 CDK12Q9NYV4 1490 aaPredicted RBP27.36■■□□□ 1.97
PTPN18-202ENST00000347849 ANKLE2Q86XL3 938 aa27.35■■□□□ 1.97
PTPN18-202ENST00000347849 MYH16Q9H6N6 1097 aa27.35■■□□□ 1.97
PTPN18-202ENST00000347849 TNNQ9UQP3 1299 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms