RNA–Protein interactions for RNA: ENST00000346991.9

KNL1-201, Transcript of kinetochore scaffold 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KNL1, Length 9,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-201ENST00000346991 ATP2B2Q01814 1243 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 API5Q9BZZ5 524 aaKnown RBP8.63□□□□□ -1.03
KNL1-201ENST00000346991 E9PSI1 815 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 NLRP13Q86W25 1043 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 CCDC175P0C221 793 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 FERP16591 822 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 TRIM22Q8IYM9 498 aa8.63□□□□□ -1.03
KNL1-201ENST00000346991 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 SOGA3Q5TF21 947 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 CAVIN1Q6NZI2 390 aaKnown RBP8.62□□□□□ -1.03
KNL1-201ENST00000346991 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.62□□□□□ -1.03
KNL1-201ENST00000346991 NEUROD6Q96NK8 337 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 TAF3Q5VWG9 929 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 BCCIPQ9P287 314 aaKnown RBP eCLIP8.62□□□□□ -1.03
KNL1-201ENST00000346991 CCDC57Q2TAC2 916 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 FMN1Q68DA7 1419 aa8.62□□□□□ -1.03
KNL1-201ENST00000346991 SREK1Q8WXA9 508 aaKnown RBP8.61□□□□□ -1.03
KNL1-201ENST00000346991 SLU7O95391 586 aaKnown RBP8.61□□□□□ -1.03
KNL1-201ENST00000346991 TANGO6Q9C0B7 1094 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 TMOD2Q9NZR1 351 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 RBM5P52756 815 aaKnown RBP eCLIP8.61□□□□□ -1.03
KNL1-201ENST00000346991 BAZ1AQ9NRL2 1556 aaPredicted RBP8.61□□□□□ -1.03
KNL1-201ENST00000346991 HOOK3Q86VS8 718 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 CENPHQ9H3R5 247 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 NACADO15069 1562 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 GIMAP7Q8NHV1 300 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
KNL1-201ENST00000346991 ZNF76P36508 570 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 ZNF397Q8NF99 534 aaPredicted RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 ZNF287Q9HBT7 754 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 FKBP5Q13451 457 aaPredicted RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 SCLT1Q96NL6 688 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 NOL7Q9UMY1 257 aaKnown RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 VGFO15240 615 aaPredicted RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.6□□□□□ -1.03
KNL1-201ENST00000346991 V9GYY5 206 aaPredicted RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 CCDC146Q8IYE0 955 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 CBFA2T2O43439 604 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 MRPS9P82933 396 aaKnown RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 PIBF1Q8WXW3 757 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 ZHX3Q9H4I2 956 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 CDKL5O76039 1030 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 TSNARE1Q96NA8 513 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 MPHOSPH6Q99547 160 aaKnown RBP8.6□□□□□ -1.03
KNL1-201ENST00000346991 FAM13BQ9NYF5 915 aa8.6□□□□□ -1.03
KNL1-201ENST00000346991 FOSBP53539 338 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 BRPF1P55201 1214 aaPredicted RBP8.59□□□□□ -1.03
KNL1-201ENST00000346991 MAP2K1Q02750 393 aaPredicted RBP8.59□□□□□ -1.03
KNL1-201ENST00000346991 AAMPQ13685 434 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 VPS36Q86VN1 386 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 LRRCC1Q9C099 1032 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 ZSCAN25Q6NSZ9 544 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 TAF4BQ92750 862 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 TRIM5Q9C035 493 aa8.59□□□□□ -1.03
KNL1-201ENST00000346991 CCDC144AA2RUR9 1427 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 GCOM1H8Y6P7 765 aaPredicted RBP8.58□□□□□ -1.04
KNL1-201ENST00000346991 MYZAPP0CAP1 466 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 MCM2P49736 904 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 NOP2P46087 812 aaKnown RBP8.58□□□□□ -1.04
KNL1-201ENST00000346991 EHMT1Q9H9B1 1298 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 PLIN1O60240 522 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 NUTM2FA1L443 756 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 ANKRD1Q15327 319 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
KNL1-201ENST00000346991 CCDC158Q5M9N0 1113 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 LRSAM1Q6UWE0 723 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 FAM43AQ8N2R8 423 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 HSPA5P11021 654 aaKnown RBP8.58□□□□□ -1.04
KNL1-201ENST00000346991 MCM3P25205 808 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 CCDC69A6NI79 296 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 TTC39AQ5SRH9 613 aa8.58□□□□□ -1.04
KNL1-201ENST00000346991 GTPBP4Q9BZE4 634 aaKnown RBP8.57□□□□□ -1.04
KNL1-201ENST00000346991 RRBP1Q9P2E9 1410 aaKnown RBP8.57□□□□□ -1.04
KNL1-201ENST00000346991 RAB3IL1Q8TBN0 382 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 DDX12PQ92771 950 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 GPRASP1Q5JY77 1395 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 SERPINC1P01008 464 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 UBTFL1P0CB47 393 aaPredicted RBP8.57□□□□□ -1.04
KNL1-201ENST00000346991 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 IMMTQ16891 758 aaKnown RBP8.57□□□□□ -1.04
KNL1-201ENST00000346991 FERMT2Q96AC1 680 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 CNNM1Q9NRU3 951 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 WDR70Q9NW82 654 aa8.57□□□□□ -1.04
KNL1-201ENST00000346991 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 FGFR1OPO95684 399 aaKnown RBP8.56□□□□□ -1.04
KNL1-201ENST00000346991 FSD1Q9BTV5 496 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 MBD3O95983 291 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 MAP9Q49MG5 647 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 SIN3AQ96ST3 1273 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 TNIKQ9UKE5 1360 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 STK38Q15208 465 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 TSPYL4Q9UJ04 414 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 GSE1Q14687 1217 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 WASF1Q92558 559 aa8.56□□□□□ -1.04
KNL1-201ENST00000346991 SEC63Q9UGP8 760 aaKnown RBP8.56□□□□□ -1.04
KNL1-201ENST00000346991 CCDC148Q8NFR7 591 aa8.55□□□□□ -1.04
KNL1-201ENST00000346991 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms