RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ATP6V1DQ9Y5K8 247 aa18.73■□□□□ 0.59
SRPK1-201ENST00000346162 PDIA4P13667 645 aaKnown RBP18.73■□□□□ 0.59
SRPK1-201ENST00000346162 ATAD2Q6PL18 1390 aa18.72■□□□□ 0.59
SRPK1-201ENST00000346162 CCAR2Q8N163 923 aaKnown RBP18.72■□□□□ 0.59
SRPK1-201ENST00000346162 ATF7IPQ6VMQ6 1270 aa18.71■□□□□ 0.59
SRPK1-201ENST00000346162 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
SRPK1-201ENST00000346162 RUFY2Q8WXA3 655 aa18.71■□□□□ 0.59
SRPK1-201ENST00000346162 CWC15Q9P013 229 aaKnown RBP18.71■□□□□ 0.59
SRPK1-201ENST00000346162 PANK2Q9BZ23 570 aa18.71■□□□□ 0.59
SRPK1-201ENST00000346162 NINLQ9Y2I6 1382 aa18.71■□□□□ 0.59
SRPK1-201ENST00000346162 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.58
SRPK1-201ENST00000346162 SASS6Q6UVJ0 657 aa18.7■□□□□ 0.58
SRPK1-201ENST00000346162 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
SRPK1-201ENST00000346162 CDC45O75419 566 aa18.7■□□□□ 0.58
SRPK1-201ENST00000346162 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
SRPK1-201ENST00000346162 ERICH4A6NGS2 130 aa18.7■□□□□ 0.58
SRPK1-201ENST00000346162 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
SRPK1-201ENST00000346162 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
SRPK1-201ENST00000346162 IFIT2P09913 472 aaKnown RBP18.69■□□□□ 0.58
SRPK1-201ENST00000346162 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
SRPK1-201ENST00000346162 GOLGA6L19H0YKK7 550 aa18.69■□□□□ 0.58
SRPK1-201ENST00000346162 GAS2L2Q8NHY3 880 aa18.68■□□□□ 0.58
SRPK1-201ENST00000346162 C1orf115Q9H7X2 142 aa18.68■□□□□ 0.58
SRPK1-201ENST00000346162 ARGLU1Q9NWB6 273 aaPredicted RBP18.68■□□□□ 0.58
SRPK1-201ENST00000346162 RTEL1-TNFRSF6BF6WH68 1400 aa18.68■□□□□ 0.58
SRPK1-201ENST00000346162 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
SRPK1-201ENST00000346162 NUP153P49790 1475 aaKnown RBP18.67■□□□□ 0.58
SRPK1-201ENST00000346162 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
SRPK1-201ENST00000346162 PLCD3Q8N3E9 789 aa18.67■□□□□ 0.58
SRPK1-201ENST00000346162 C20orf194Q5TEA3 1177 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 ABTB2Q8N961 1025 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 DYNC1I1O14576 645 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 UBTFL1P0CB47 393 aaPredicted RBP18.66■□□□□ 0.58
SRPK1-201ENST00000346162 TMPOP42166 694 aaKnown RBP18.66■□□□□ 0.58
SRPK1-201ENST00000346162 HSP90AB4PQ58FF6 505 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 GCC1Q96CN9 775 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 FCHSD2O94868 740 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 ADGRL1O94910 1474 aa18.66■□□□□ 0.58
SRPK1-201ENST00000346162 BECN2A8MW95 431 aa18.65■□□□□ 0.58
SRPK1-201ENST00000346162 G3BP1Q13283 466 aaKnown RBP eCLIP18.65■□□□□ 0.588e-7■□□□□ 8.3
SRPK1-201ENST00000346162 GNAI3P08754 354 aa18.65■□□□□ 0.58
SRPK1-201ENST00000346162 RAPGEF4Q8WZA2 1011 aa18.65■□□□□ 0.58
SRPK1-201ENST00000346162 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
SRPK1-201ENST00000346162 TPM3P06753 285 aa18.64■□□□□ 0.57
SRPK1-201ENST00000346162 ATP10BO94823 1461 aa18.64■□□□□ 0.57
SRPK1-201ENST00000346162 CCDC30Q5VVM6 783 aa18.64■□□□□ 0.57
SRPK1-201ENST00000346162 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
SRPK1-201ENST00000346162 HOMER1Q86YM7 354 aa18.63■□□□□ 0.57
SRPK1-201ENST00000346162 MBD3O95983 291 aa18.63■□□□□ 0.57
SRPK1-201ENST00000346162 TRERF1Q96PN7 1200 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 NOC3LQ8WTT2 800 aaKnown RBP18.62■□□□□ 0.57
SRPK1-201ENST00000346162 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 CCDC61Q9Y6R9 512 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 RRS1Q15050 365 aaKnown RBP18.62■□□□□ 0.57
SRPK1-201ENST00000346162 SLC26A8Q96RN1 970 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 CALRP27797 417 aaKnown RBP18.62■□□□□ 0.57
SRPK1-201ENST00000346162 PPP4R3BQ5MIZ7 849 aa18.62■□□□□ 0.57
SRPK1-201ENST00000346162 H3BQV1 296 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
SRPK1-201ENST00000346162 EVA1CP58658 441 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 IFFO2Q5TF58 517 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 FAM184AQ8NB25 1140 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 SCAF11Q99590 1463 aaKnown RBP18.61■□□□□ 0.57
SRPK1-201ENST00000346162 RAPGEF6Q8TEU7 1601 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 TPD52L1Q16890 204 aaPredicted RBP18.61■□□□□ 0.57
SRPK1-201ENST00000346162 NLRP2Q9NX02 1062 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 TOMM22Q9NS69 142 aa18.61■□□□□ 0.57
SRPK1-201ENST00000346162 IDI1Q13907 227 aa18.6■□□□□ 0.57
SRPK1-201ENST00000346162 SF3A1Q15459 793 aaKnown RBP18.6■□□□□ 0.57
SRPK1-201ENST00000346162 MNS1Q8NEH6 495 aa18.6■□□□□ 0.57
SRPK1-201ENST00000346162 ZNF428Q96B54 188 aa18.6■□□□□ 0.57
SRPK1-201ENST00000346162 ERC2O15083 957 aa18.6■□□□□ 0.57
SRPK1-201ENST00000346162 RARSP54136 660 aaKnown RBP18.6■□□□□ 0.57
SRPK1-201ENST00000346162 AIMP1Q12904 312 aaKnown RBP18.6■□□□□ 0.57
SRPK1-201ENST00000346162 TSPYL1Q9H0U9 437 aa18.6■□□□□ 0.57
SRPK1-201ENST00000346162 TCOF1Q13428 1488 aaKnown RBP18.6■□□□□ 0.57
SRPK1-201ENST00000346162 SPDYE4A6NLX3 237 aa18.59■□□□□ 0.57
SRPK1-201ENST00000346162 SURF6O75683 361 aaKnown RBP18.59■□□□□ 0.57
SRPK1-201ENST00000346162 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
SRPK1-201ENST00000346162 SMAP1Q8IYB5 467 aaPredicted RBP18.59■□□□□ 0.57
SRPK1-201ENST00000346162 THEMISQ8N1K5 641 aaPredicted RBP18.59■□□□□ 0.57
SRPK1-201ENST00000346162 CALCOCO1Q9P1Z2 691 aa18.59■□□□□ 0.57
SRPK1-201ENST00000346162 LETM1O95202 739 aaPredicted RBP18.59■□□□□ 0.57
SRPK1-201ENST00000346162 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
SRPK1-201ENST00000346162 CCDC112Q8NEF3 446 aa18.59■□□□□ 0.57
SRPK1-201ENST00000346162 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.57
SRPK1-201ENST00000346162 NUDT16Q96DE0 195 aaKnown RBP18.58■□□□□ 0.57
SRPK1-201ENST00000346162 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.57
SRPK1-201ENST00000346162 RIC3Q7Z5B4 369 aa18.58■□□□□ 0.56
SRPK1-201ENST00000346162 GPRASP1Q5JY77 1395 aa18.57■□□□□ 0.56
SRPK1-201ENST00000346162 RNF20Q5VTR2 975 aa18.57■□□□□ 0.56
SRPK1-201ENST00000346162 RALGAPBQ86X10 1494 aa18.57■□□□□ 0.56
SRPK1-201ENST00000346162 ESCO1Q5FWF5 840 aa18.57■□□□□ 0.56
SRPK1-201ENST00000346162 GNAI2P04899 355 aa18.57■□□□□ 0.56
SRPK1-201ENST00000346162 TMEM57Q8N5G2 664 aa18.56■□□□□ 0.56
SRPK1-201ENST00000346162 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
SRPK1-201ENST00000346162 LRRFIP1Q32MZ4 808 aaKnown RBP18.56■□□□□ 0.56
SRPK1-201ENST00000346162 CHMP4CQ96CF2 233 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms