RNA–Protein interactions for RNA: ENST00000342784.6

SYDE1-201, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYDE1, Length 3,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-201ENST00000342784 ZKSCAN5Q9Y2L8 839 aa16.95■□□□□ 0.3
SYDE1-201ENST00000342784 ZBTB22O15209 634 aa16.95■□□□□ 0.3
SYDE1-201ENST00000342784 DDIT3P35638 169 aa16.95■□□□□ 0.3
SYDE1-201ENST00000342784 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
SYDE1-201ENST00000342784 RNF216Q9NWF9 866 aaPredicted RBP16.94■□□□□ 0.3
SYDE1-201ENST00000342784 RGS22Q8NE09 1264 aa16.94■□□□□ 0.3
SYDE1-201ENST00000342784 KCNG1Q9UIX4 513 aa16.94■□□□□ 0.3
SYDE1-201ENST00000342784 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
SYDE1-201ENST00000342784 K7ELQ4 463 aaPredicted RBP16.93■□□□□ 0.3
SYDE1-201ENST00000342784 ABCA9Q8IUA7 1624 aa16.93■□□□□ 0.3
SYDE1-201ENST00000342784 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
SYDE1-201ENST00000342784 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
SYDE1-201ENST00000342784 CCDC39Q9UFE4 941 aa16.93■□□□□ 0.3
SYDE1-201ENST00000342784 ZSCAN20P17040 1043 aaPredicted RBP16.92■□□□□ 0.3
SYDE1-201ENST00000342784 CNPY4Q8N129 248 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 RBM25P49756 843 aaKnown RBP16.92■□□□□ 0.3
SYDE1-201ENST00000342784 NCOA3Q9Y6Q9 1424 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 GPRASP1Q5JY77 1395 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 ABCC1P33527 1531 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 MCM5P33992 734 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 MLECQ14165 292 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
SYDE1-201ENST00000342784 CDK11BP21127 795 aaKnown RBP16.91■□□□□ 0.3
SYDE1-201ENST00000342784 CBX1P83916 185 aa16.91■□□□□ 0.3
SYDE1-201ENST00000342784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.91■□□□□ 0.3
SYDE1-201ENST00000342784 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
SYDE1-201ENST00000342784 DZIP1LQ8IYY4 767 aaKnown RBP16.91■□□□□ 0.3
SYDE1-201ENST00000342784 ADGRL2O95490 1459 aa16.91■□□□□ 0.3
SYDE1-201ENST00000342784 IBTKQ9P2D0 1353 aaPredicted RBP16.91■□□□□ 0.3
SYDE1-201ENST00000342784 ZNF445P59923 1031 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 ZSCAN23Q3MJ62 389 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 CROCC2H7BZ55 1655 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 ADGBQ8N7X0 1667 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
SYDE1-201ENST00000342784 ITPRIPQ8IWB1 547 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 MAGI2Q86UL8 1455 aa16.9■□□□□ 0.3
SYDE1-201ENST00000342784 ARHGEF5Q12774 1597 aa16.89■□□□□ 0.29
SYDE1-201ENST00000342784 BCCIPQ9P287 314 aaKnown RBP eCLIP16.89■□□□□ 0.29
SYDE1-201ENST00000342784 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
SYDE1-201ENST00000342784 SHANK2Q9UPX8 1470 aa16.88■□□□□ 0.29
SYDE1-201ENST00000342784 PRIM1P49642 420 aaKnown RBP16.88■□□□□ 0.29
SYDE1-201ENST00000342784 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
SYDE1-201ENST00000342784 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
SYDE1-201ENST00000342784 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
SYDE1-201ENST00000342784 GAS2L2Q8NHY3 880 aa16.87■□□□□ 0.29
SYDE1-201ENST00000342784 GTPBP4Q9BZE4 634 aaKnown RBP16.87■□□□□ 0.29
SYDE1-201ENST00000342784 PDLIM2Q96JY6 352 aa16.86■□□□□ 0.29
SYDE1-201ENST00000342784 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.86■□□□□ 0.29
SYDE1-201ENST00000342784 KDM5DQ9BY66 1539 aa16.86■□□□□ 0.29
SYDE1-201ENST00000342784 TRPM1Q7Z4N2 1603 aa16.86■□□□□ 0.29
SYDE1-201ENST00000342784 NUCB2P80303 420 aa16.85■□□□□ 0.29
SYDE1-201ENST00000342784 KIF20AO95235 890 aa16.85■□□□□ 0.29
SYDE1-201ENST00000342784 RNF214Q8ND24 703 aa16.85■□□□□ 0.29
SYDE1-201ENST00000342784 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
SYDE1-201ENST00000342784 ASXL1Q8IXJ9 1541 aa16.85■□□□□ 0.29
SYDE1-201ENST00000342784 CD2BP2O95400 341 aaKnown RBP16.85■□□□□ 0.29
SYDE1-201ENST00000342784 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
SYDE1-201ENST00000342784 DDX19BQ9UMR2 479 aa16.84■□□□□ 0.29
SYDE1-201ENST00000342784 PRPF40AO75400 957 aaKnown RBP16.84■□□□□ 0.29
SYDE1-201ENST00000342784 TCP11L2Q8N4U5 519 aa16.84■□□□□ 0.29
SYDE1-201ENST00000342784 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
SYDE1-201ENST00000342784 RBM27Q9P2N5 1060 aaKnown RBP16.83■□□□□ 0.28
SYDE1-201ENST00000342784 LETM1O95202 739 aaPredicted RBP16.83■□□□□ 0.28
SYDE1-201ENST00000342784 HMGN5P82970 282 aaKnown RBP16.83■□□□□ 0.28
SYDE1-201ENST00000342784 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
SYDE1-201ENST00000342784 MYRIPQ8NFW9 859 aa16.82■□□□□ 0.28
SYDE1-201ENST00000342784 TSC1Q92574 1164 aa16.82■□□□□ 0.28
SYDE1-201ENST00000342784 ZNF518AQ6AHZ1 1483 aa16.82■□□□□ 0.28
SYDE1-201ENST00000342784 PRDM15P57071 1507 aaPredicted RBP16.81■□□□□ 0.28
SYDE1-201ENST00000342784 KIF16BQ96L93 1317 aa16.81■□□□□ 0.28
SYDE1-201ENST00000342784 A2MP01023 1474 aa16.81■□□□□ 0.28
SYDE1-201ENST00000342784 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
SYDE1-201ENST00000342784 SYCE3A1L190 88 aa16.81■□□□□ 0.28
SYDE1-201ENST00000342784 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
SYDE1-201ENST00000342784 WDR63Q8IWG1 891 aa16.8■□□□□ 0.28
SYDE1-201ENST00000342784 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
SYDE1-201ENST00000342784 LMBRD1Q9NUN5 540 aa16.8■□□□□ 0.28
SYDE1-201ENST00000342784 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
SYDE1-201ENST00000342784 CLEC17AQ6ZS10 378 aa16.79■□□□□ 0.28
SYDE1-201ENST00000342784 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
SYDE1-201ENST00000342784 MPNDQ8N594 471 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 JARID2Q92833 1246 aaPredicted RBP16.78■□□□□ 0.28
SYDE1-201ENST00000342784 POGZQ7Z3K3 1410 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 LRSAM1Q6UWE0 723 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 ARAP3Q8WWN8 1544 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 DUOX2Q9NRD8 1548 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 AEBP1Q8IUX7 1158 aa16.78■□□□□ 0.28
SYDE1-201ENST00000342784 CGNQ9P2M7 1197 aaKnown RBP16.78■□□□□ 0.28
SYDE1-201ENST00000342784 PLXNC1O60486 1568 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 ZFYVE16Q7Z3T8 1539 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 KANK1Q14678 1352 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 ANKRD45Q5TZF3 282 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
SYDE1-201ENST00000342784 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.27
SYDE1-201ENST00000342784 KIF2CQ99661 725 aa16.77■□□□□ 0.27
SYDE1-201ENST00000342784 BMP2KLQ5H9B9 411 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms