RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 EIF3AQ14152 1382 aaKnown RBP23.86■■□□□ 1.41
H3F3C-201ENST00000340398 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
H3F3C-201ENST00000340398 A0A0G2JS52 829 aa23.85■■□□□ 1.41
H3F3C-201ENST00000340398 MYT1Q01538 1121 aa23.85■■□□□ 1.41
H3F3C-201ENST00000340398 CDK19Q9BWU1 502 aa23.84■■□□□ 1.41
H3F3C-201ENST00000340398 SF3B2Q13435 895 aaKnown RBP23.82■■□□□ 1.4
H3F3C-201ENST00000340398 ARHGEF28Q8N1W1 1705 aaKnown RBP23.81■■□□□ 1.4
H3F3C-201ENST00000340398 NBPF1Q3BBV0 1214 aa23.81■■□□□ 1.4
H3F3C-201ENST00000340398 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
H3F3C-201ENST00000340398 FAM182BQ5T319 152 aa23.8■■□□□ 1.4
H3F3C-201ENST00000340398 NRAPQ86VF7 1730 aa23.8■■□□□ 1.4
H3F3C-201ENST00000340398 CHRNA2Q15822 529 aa23.78■■□□□ 1.4
H3F3C-201ENST00000340398 PRDM11Q9NQV5 511 aa23.78■■□□□ 1.4
H3F3C-201ENST00000340398 ATP7BP35670 1465 aa23.78■■□□□ 1.4
H3F3C-201ENST00000340398 COL14A1Q05707 1796 aaKnown RBP23.78■■□□□ 1.4
H3F3C-201ENST00000340398 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
H3F3C-201ENST00000340398 SPATA31A5Q5VU36 1347 aa23.77■■□□□ 1.4
H3F3C-201ENST00000340398 SPATA31A7Q8IWB4 1347 aa23.77■■□□□ 1.4
H3F3C-201ENST00000340398 NBPF8Q3BBV2 869 aa23.76■■□□□ 1.39
H3F3C-201ENST00000340398 ACEP12821 1306 aa23.76■■□□□ 1.39
H3F3C-201ENST00000340398 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
H3F3C-201ENST00000340398 CCDC61Q9Y6R9 512 aa23.74■■□□□ 1.39
H3F3C-201ENST00000340398 KIAA0232Q92628 1395 aa23.74■■□□□ 1.39
H3F3C-201ENST00000340398 STRN4Q9NRL3 753 aa23.72■■□□□ 1.39
H3F3C-201ENST00000340398 ITSN1Q15811 1721 aa23.72■■□□□ 1.39
H3F3C-201ENST00000340398 PLEKHG3A1L390 1219 aa23.71■■□□□ 1.39
H3F3C-201ENST00000340398 POLR3AO14802 1390 aaPredicted RBP23.69■■□□□ 1.38
H3F3C-201ENST00000340398 SPATA31A1Q5TZJ5 1347 aa23.69■■□□□ 1.38
H3F3C-201ENST00000340398 BAG6P46379 1132 aa23.69■■□□□ 1.38
H3F3C-201ENST00000340398 EN1Q05925 392 aaPredicted RBP23.69■■□□□ 1.38
H3F3C-201ENST00000340398 ABTB2Q8N961 1025 aa23.68■■□□□ 1.38
H3F3C-201ENST00000340398 CABP2Q9NPB3 220 aa23.68■■□□□ 1.38
H3F3C-201ENST00000340398 PSDA5PKW4 1024 aaPredicted RBP23.67■■□□□ 1.38
H3F3C-201ENST00000340398 SRPK2P78362 688 aaKnown RBP23.67■■□□□ 1.38
H3F3C-201ENST00000340398 USP35Q9P2H5 1018 aa23.67■■□□□ 1.38
H3F3C-201ENST00000340398 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
H3F3C-201ENST00000340398 EVA1CP58658 441 aa23.66■■□□□ 1.38
H3F3C-201ENST00000340398 PHRF1Q9P1Y6 1649 aaKnown RBP23.66■■□□□ 1.38
H3F3C-201ENST00000340398 TOPAZ1Q8N9V7 1692 aa23.64■■□□□ 1.38
H3F3C-201ENST00000340398 CENPJQ9HC77 1338 aaPredicted RBP23.63■■□□□ 1.37
H3F3C-201ENST00000340398 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
H3F3C-201ENST00000340398 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
H3F3C-201ENST00000340398 LARP1Q6PKG0 1096 aaKnown RBP23.62■■□□□ 1.37
H3F3C-201ENST00000340398 SIN3AQ96ST3 1273 aa23.61■■□□□ 1.37
H3F3C-201ENST00000340398 PPIP5K1Q6PFW1 1433 aa23.6■■□□□ 1.37
H3F3C-201ENST00000340398 TRIM37O94972 964 aa23.6■■□□□ 1.37
H3F3C-201ENST00000340398 CABP1Q9NZU7 370 aa23.6■■□□□ 1.37
H3F3C-201ENST00000340398 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
H3F3C-201ENST00000340398 GCP02774 474 aa23.59■■□□□ 1.37
H3F3C-201ENST00000340398 EZH2Q15910 746 aaKnown RBP23.59■■□□□ 1.37
H3F3C-201ENST00000340398 NLRP13Q86W25 1043 aa23.59■■□□□ 1.37
H3F3C-201ENST00000340398 USP19O94966 1318 aa23.58■■□□□ 1.36
H3F3C-201ENST00000340398 RGPD1P0DJD0 1748 aa23.57■■□□□ 1.36
H3F3C-201ENST00000340398 FAM196AQ6ZSG2 479 aa23.57■■□□□ 1.36
H3F3C-201ENST00000340398 SSH2Q76I76 1423 aa23.57■■□□□ 1.36
H3F3C-201ENST00000340398 BARGINQ6ZT62 677 aa23.56■■□□□ 1.36
H3F3C-201ENST00000340398 ZBTB7CA1YPR0 619 aa23.55■■□□□ 1.36
H3F3C-201ENST00000340398 PDE3BQ13370 1112 aa23.55■■□□□ 1.36
H3F3C-201ENST00000340398 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
H3F3C-201ENST00000340398 R3HDM1Q15032 1099 aaKnown RBP23.55■■□□□ 1.36
H3F3C-201ENST00000340398 NRKQ7Z2Y5 1582 aa23.55■■□□□ 1.36
H3F3C-201ENST00000340398 CPDO75976 1380 aa23.54■■□□□ 1.36
H3F3C-201ENST00000340398 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
H3F3C-201ENST00000340398 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
H3F3C-201ENST00000340398 APBA3O96018 575 aa23.53■■□□□ 1.36
H3F3C-201ENST00000340398 NLRP6P59044 892 aa23.53■■□□□ 1.36
H3F3C-201ENST00000340398 QRICH2Q9H0J4 1663 aa23.53■■□□□ 1.36
H3F3C-201ENST00000340398 TNS1Q9HBL0 1735 aaKnown RBP23.53■■□□□ 1.36
H3F3C-201ENST00000340398 LMO7Q8WWI1 1683 aa23.51■■□□□ 1.35
H3F3C-201ENST00000340398 DISP2A7MBM2 1401 aa23.5■■□□□ 1.35
H3F3C-201ENST00000340398 USP6P35125 1406 aa23.49■■□□□ 1.35
H3F3C-201ENST00000340398 EVC2Q86UK5 1308 aa23.47■■□□□ 1.35
H3F3C-201ENST00000340398 LRP5O75197 1615 aa23.47■■□□□ 1.35
H3F3C-201ENST00000340398 BRD4O60885 1362 aaPredicted RBP23.46■■□□□ 1.35
H3F3C-201ENST00000340398 COL5A2P05997 1499 aaPredicted RBP23.46■■□□□ 1.35
H3F3C-201ENST00000340398 THRAP3Q9Y2W1 955 aaKnown RBP23.46■■□□□ 1.35
H3F3C-201ENST00000340398 AXIN2Q9Y2T1 843 aa23.44■■□□□ 1.34
H3F3C-201ENST00000340398 TRPM1Q7Z4N2 1603 aa23.44■■□□□ 1.34
H3F3C-201ENST00000340398 ROCK2O75116 1388 aaKnown RBP23.43■■□□□ 1.34
H3F3C-201ENST00000340398 SOX12O15370 315 aa23.42■■□□□ 1.34
H3F3C-201ENST00000340398 CRB1P82279 1406 aa23.42■■□□□ 1.34
H3F3C-201ENST00000340398 AATKQ6ZMQ8 1374 aa23.41■■□□□ 1.34
H3F3C-201ENST00000340398 TTC21BQ7Z4L5 1316 aa23.41■■□□□ 1.34
H3F3C-201ENST00000340398 TOM1L2Q6ZVM7 507 aa23.41■■□□□ 1.34
H3F3C-201ENST00000340398 ZNF692Q9BU19 519 aaPredicted RBP23.41■■□□□ 1.34
H3F3C-201ENST00000340398 SLIT3O75094 1523 aa23.4■■□□□ 1.34
H3F3C-201ENST00000340398 PIK3C2AO00443 1686 aa23.4■■□□□ 1.34
H3F3C-201ENST00000340398 COL18A1P39060 1754 aa23.38■■□□□ 1.33
H3F3C-201ENST00000340398 ARHGEF25Q86VW2 580 aa23.38■■□□□ 1.33
H3F3C-201ENST00000340398 PARP4Q9UKK3 1724 aaKnown RBP23.36■■□□□ 1.33
H3F3C-201ENST00000340398 PTF1AQ7RTS3 328 aa23.36■■□□□ 1.33
H3F3C-201ENST00000340398 PARD3Q8TEW0 1356 aa23.36■■□□□ 1.33
H3F3C-201ENST00000340398 DDB1Q16531 1140 aa23.35■■□□□ 1.33
H3F3C-201ENST00000340398 RGPD5Q99666 1765 aa23.35■■□□□ 1.33
H3F3C-201ENST00000340398 NBPF14Q5TI25 921 aa23.34■■□□□ 1.33
H3F3C-201ENST00000340398 WDR17Q8IZU2 1322 aa23.33■■□□□ 1.33
H3F3C-201ENST00000340398 AKAP12Q02952 1782 aa23.33■■□□□ 1.33
H3F3C-201ENST00000340398 KCNH5Q8NCM2 988 aa23.33■■□□□ 1.33
H3F3C-201ENST00000340398 CPSF1Q10570 1443 aaKnown RBP23.33■■□□□ 1.32
H3F3C-201ENST00000340398 RREB1Q92766 1687 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms