RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
SRSF3-201ENST00000339436 BRD4O60885 1362 aaPredicted RBP17.97■□□□□ 0.47
SRSF3-201ENST00000339436 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
SRSF3-201ENST00000339436 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
SRSF3-201ENST00000339436 USP54Q70EL1 1684 aa17.95■□□□□ 0.46
SRSF3-201ENST00000339436 A0A1W2PP64 1363 aa17.95■□□□□ 0.46
SRSF3-201ENST00000339436 TMC1Q8TDI8 760 aa17.94■□□□□ 0.46
SRSF3-201ENST00000339436 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
SRSF3-201ENST00000339436 SLC12A5Q9H2X9 1139 aa17.93■□□□□ 0.46
SRSF3-201ENST00000339436 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
SRSF3-201ENST00000339436 LMOD2Q6P5Q4 547 aa17.92■□□□□ 0.46
SRSF3-201ENST00000339436 ZNF692Q9BU19 519 aaPredicted RBP17.92■□□□□ 0.46
SRSF3-201ENST00000339436 ANKRD36BQ8N2N9 1353 aa17.92■□□□□ 0.46
SRSF3-201ENST00000339436 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
SRSF3-201ENST00000339436 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
SRSF3-201ENST00000339436 NUTM2BA6NNL0 878 aaPredicted RBP17.91■□□□□ 0.46
SRSF3-201ENST00000339436 NUTM2EB1AL46 878 aaPredicted RBP17.91■□□□□ 0.46
SRSF3-201ENST00000339436 NUTM2AQ8IVF1 878 aaPredicted RBP17.91■□□□□ 0.46
SRSF3-201ENST00000339436 TERF2IPQ9NYB0 399 aa17.9■□□□□ 0.46
SRSF3-201ENST00000339436 PLCH1Q4KWH8 1693 aa17.9■□□□□ 0.46
SRSF3-201ENST00000339436 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
SRSF3-201ENST00000339436 SLIT3O75094 1523 aa17.88■□□□□ 0.45
SRSF3-201ENST00000339436 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
SRSF3-201ENST00000339436 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
SRSF3-201ENST00000339436 ZEB1P37275 1124 aaPredicted RBP17.88■□□□□ 0.45
SRSF3-201ENST00000339436 NWD2Q9ULI1 1742 aa17.87■□□□□ 0.45
SRSF3-201ENST00000339436 USP19O94966 1318 aa17.87■□□□□ 0.45
SRSF3-201ENST00000339436 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
SRSF3-201ENST00000339436 ABTB2Q8N961 1025 aa17.87■□□□□ 0.45
SRSF3-201ENST00000339436 CABLES1Q8TDN4 633 aa17.87■□□□□ 0.45
SRSF3-201ENST00000339436 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.87■□□□□ 0.45
SRSF3-201ENST00000339436 C11orf95C9JLR9 678 aaPredicted RBP17.86■□□□□ 0.45
SRSF3-201ENST00000339436 ADAMTS2O95450 1211 aa17.86■□□□□ 0.45
SRSF3-201ENST00000339436 KIF7Q2M1P5 1343 aa17.85■□□□□ 0.45
SRSF3-201ENST00000339436 COL14A1Q05707 1796 aaKnown RBP17.85■□□□□ 0.45
SRSF3-201ENST00000339436 NUTM2GQ5VZR2 741 aa17.84■□□□□ 0.45
SRSF3-201ENST00000339436 POLR3GLQ9BT43 218 aa17.84■□□□□ 0.45
SRSF3-201ENST00000339436 PHF23Q9BUL5 403 aaPredicted RBP17.84■□□□□ 0.45
SRSF3-201ENST00000339436 NRAPQ86VF7 1730 aa17.83■□□□□ 0.45
SRSF3-201ENST00000339436 ANKRD26Q9UPS8 1709 aa17.83■□□□□ 0.45
SRSF3-201ENST00000339436 PLEKHG5O94827 1062 aa17.83■□□□□ 0.45
SRSF3-201ENST00000339436 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.45
SRSF3-201ENST00000339436 OVOS2A0A0J9YW53 1432 aa17.83■□□□□ 0.44
SRSF3-201ENST00000339436 OVOS2Q6IE36 1432 aa17.83■□□□□ 0.44
SRSF3-201ENST00000339436 LTN1O94822 1766 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 NFAT5O94916 1531 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 NLRP13Q86W25 1043 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.82■□□□□ 0.44
SRSF3-201ENST00000339436 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 USP31Q70CQ4 1352 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 CCDC7Q96M83 1385 aa17.82■□□□□ 0.44
SRSF3-201ENST00000339436 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
SRSF3-201ENST00000339436 NLRP6P59044 892 aa17.81■□□□□ 0.44
SRSF3-201ENST00000339436 SLIT2O94813 1529 aa17.8■□□□□ 0.44
SRSF3-201ENST00000339436 LMO7Q8WWI1 1683 aa17.8■□□□□ 0.44
SRSF3-201ENST00000339436 NME9Q86XW9 330 aa17.8■□□□□ 0.44
SRSF3-201ENST00000339436 AFF2P51816 1311 aa17.8■□□□□ 0.44
SRSF3-201ENST00000339436 RGS17Q9UGC6 210 aaPredicted RBP17.79■□□□□ 0.44
SRSF3-201ENST00000339436 WASHC2AQ641Q2 1341 aa17.79■□□□□ 0.44
SRSF3-201ENST00000339436 CPDO75976 1380 aa17.78■□□□□ 0.44
SRSF3-201ENST00000339436 KIAA0232Q92628 1395 aa17.78■□□□□ 0.44
SRSF3-201ENST00000339436 COL18A1P39060 1754 aa17.78■□□□□ 0.44
SRSF3-201ENST00000339436 NGLY1Q96IV0 654 aa17.77■□□□□ 0.44
SRSF3-201ENST00000339436 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
SRSF3-201ENST00000339436 RGPD5Q99666 1765 aa17.77■□□□□ 0.44
SRSF3-201ENST00000339436 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.43
SRSF3-201ENST00000339436 ZRANB1Q9UGI0 708 aa17.77■□□□□ 0.43
SRSF3-201ENST00000339436 BCL9LQ86UU0 1499 aa17.76■□□□□ 0.43
SRSF3-201ENST00000339436 GCP02774 474 aa17.76■□□□□ 0.43
SRSF3-201ENST00000339436 ABCC6O95255 1503 aa17.75■□□□□ 0.43
SRSF3-201ENST00000339436 ZNF772Q68DY9 489 aaPredicted RBP17.75■□□□□ 0.43
SRSF3-201ENST00000339436 PANK3Q9H999 370 aa17.74■□□□□ 0.43
SRSF3-201ENST00000339436 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
SRSF3-201ENST00000339436 FAM83GA6ND36 823 aa17.73■□□□□ 0.43
SRSF3-201ENST00000339436 FYB1O15117 783 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
SRSF3-201ENST00000339436 KCNH5Q8NCM2 988 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 USP21Q9UK80 565 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 CGNL1Q0VF96 1302 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 ATRNO75882 1429 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 CAMTA1Q9Y6Y1 1673 aa17.72■□□□□ 0.43
SRSF3-201ENST00000339436 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
SRSF3-201ENST00000339436 COG3Q96JB2 828 aa17.71■□□□□ 0.43
SRSF3-201ENST00000339436 MAP2P11137 1827 aaKnown RBP17.7■□□□□ 0.42
SRSF3-201ENST00000339436 SOX12O15370 315 aa17.7■□□□□ 0.42
SRSF3-201ENST00000339436 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
SRSF3-201ENST00000339436 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
SRSF3-201ENST00000339436 GLI3P10071 1580 aa17.69■□□□□ 0.42
SRSF3-201ENST00000339436 NSD2O96028 1365 aa17.69■□□□□ 0.42
SRSF3-201ENST00000339436 AATKQ6ZMQ8 1374 aa17.69■□□□□ 0.42
SRSF3-201ENST00000339436 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
SRSF3-201ENST00000339436 COL5A2P05997 1499 aaPredicted RBP17.68■□□□□ 0.42
SRSF3-201ENST00000339436 BTG4Q9NY30 223 aa17.68■□□□□ 0.42
SRSF3-201ENST00000339436 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
SRSF3-201ENST00000339436 PEAK1Q9H792 1746 aa17.67■□□□□ 0.42
SRSF3-201ENST00000339436 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
SRSF3-201ENST00000339436 TRPC5Q9UL62 973 aaPredicted RBP17.67■□□□□ 0.42
SRSF3-201ENST00000339436 WNK3Q9BYP7 1800 aa17.66■□□□□ 0.42
SRSF3-201ENST00000339436 QTRT2Q9H974 415 aaKnown RBP17.65■□□□□ 0.42
SRSF3-201ENST00000339436 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms