RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 KIAA1210Q9ULL0 1709 aa28.03■■■□□ 2.08
ITGA4-202ENST00000339307 NUTM2GQ5VZR2 741 aa28.02■■■□□ 2.08
ITGA4-202ENST00000339307 SRPK2P78362 688 aaKnown RBP28.01■■■□□ 2.08
ITGA4-202ENST00000339307 CCDC61Q9Y6R9 512 aa28.01■■■□□ 2.08
ITGA4-202ENST00000339307 NEUROD1Q13562 356 aa28.01■■■□□ 2.07
ITGA4-202ENST00000339307 PRDM11Q9NQV5 511 aa28.01■■■□□ 2.07
ITGA4-202ENST00000339307 ACEP12821 1306 aa28■■■□□ 2.07
ITGA4-202ENST00000339307 FAM98CQ17RN3 349 aaKnown RBP27.99■■■□□ 2.07
ITGA4-202ENST00000339307 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
ITGA4-202ENST00000339307 SIN3AQ96ST3 1273 aa27.99■■■□□ 2.07
ITGA4-202ENST00000339307 BRWD3Q6RI45 1802 aa27.98■■■□□ 2.07
ITGA4-202ENST00000339307 SF3B2Q13435 895 aaKnown RBP27.98■■■□□ 2.07
ITGA4-202ENST00000339307 NBPF8Q3BBV2 869 aa27.98■■■□□ 2.07
ITGA4-202ENST00000339307 KRT27Q7Z3Y8 459 aa27.98■■■□□ 2.07
ITGA4-202ENST00000339307 ZRANB1Q9UGI0 708 aa27.98■■■□□ 2.07
ITGA4-202ENST00000339307 CENPJQ9HC77 1338 aaPredicted RBP27.97■■■□□ 2.07
ITGA4-202ENST00000339307 COL14A1Q05707 1796 aaKnown RBP27.96■■■□□ 2.07
ITGA4-202ENST00000339307 CABP2Q9NPB3 220 aa27.95■■■□□ 2.07
ITGA4-202ENST00000339307 ONECUT3O60422 494 aaPredicted RBP27.94■■■□□ 2.06
ITGA4-202ENST00000339307 ZC3H6P61129 1189 aaKnown RBP27.94■■■□□ 2.06
ITGA4-202ENST00000339307 CHRNA2Q15822 529 aa27.93■■■□□ 2.06
ITGA4-202ENST00000339307 BLMP54132 1417 aaPredicted RBP27.93■■■□□ 2.06
ITGA4-202ENST00000339307 PLEKHG3A1L390 1219 aa27.92■■■□□ 2.06
ITGA4-202ENST00000339307 ABTB2Q8N961 1025 aa27.92■■■□□ 2.06
ITGA4-202ENST00000339307 EP400Q96L91 3159 aa27.92■■■□□ 2.06
ITGA4-202ENST00000339307 POLR3AO14802 1390 aaPredicted RBP27.92■■■□□ 2.06
ITGA4-202ENST00000339307 KIAA0232Q92628 1395 aa27.92■■■□□ 2.06
ITGA4-202ENST00000339307 STRN4Q9NRL3 753 aa27.92■■■□□ 2.06
ITGA4-202ENST00000339307 NRAPQ86VF7 1730 aa27.91■■■□□ 2.06
ITGA4-202ENST00000339307 DEFB132Q7Z7B7 95 aa27.9■■■□□ 2.06
ITGA4-202ENST00000339307 PPIP5K1Q6PFW1 1433 aa27.89■■■□□ 2.06
ITGA4-202ENST00000339307 TOPAZ1Q8N9V7 1692 aa27.89■■■□□ 2.06
ITGA4-202ENST00000339307 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.05
ITGA4-202ENST00000339307 SPATA31A5Q5VU36 1347 aa27.88■■■□□ 2.05
ITGA4-202ENST00000339307 SPATA31A7Q8IWB4 1347 aa27.88■■■□□ 2.05
ITGA4-202ENST00000339307 EVA1CP58658 441 aa27.87■■■□□ 2.05
ITGA4-202ENST00000339307 QRICH2Q9H0J4 1663 aa27.86■■■□□ 2.05
ITGA4-202ENST00000339307 USP35Q9P2H5 1018 aa27.84■■■□□ 2.05
ITGA4-202ENST00000339307 PHRF1Q9P1Y6 1649 aaKnown RBP27.84■■■□□ 2.05
ITGA4-202ENST00000339307 ROCK2O75116 1388 aaKnown RBP27.84■■■□□ 2.05
ITGA4-202ENST00000339307 FAM182BQ5T319 152 aa27.84■■■□□ 2.05
ITGA4-202ENST00000339307 CABP1Q9NZU7 370 aa27.84■■■□□ 2.05
ITGA4-202ENST00000339307 NLRP13Q86W25 1043 aa27.83■■■□□ 2.05
ITGA4-202ENST00000339307 ZBTB7CA1YPR0 619 aa27.82■■■□□ 2.04
ITGA4-202ENST00000339307 EVC2Q86UK5 1308 aa27.81■■■□□ 2.04
ITGA4-202ENST00000339307 SPATA31A1Q5TZJ5 1347 aa27.79■■■□□ 2.04
ITGA4-202ENST00000339307 BAG6P46379 1132 aa27.78■■■□□ 2.04
ITGA4-202ENST00000339307 TRPM1Q7Z4N2 1603 aa27.78■■■□□ 2.04
ITGA4-202ENST00000339307 GCP02774 474 aa27.76■■■□□ 2.04
ITGA4-202ENST00000339307 NLRP6P59044 892 aa27.75■■■□□ 2.03
ITGA4-202ENST00000339307 NRKQ7Z2Y5 1582 aa27.74■■■□□ 2.03
ITGA4-202ENST00000339307 USP19O94966 1318 aa27.73■■■□□ 2.03
ITGA4-202ENST00000339307 LARP1Q6PKG0 1096 aaKnown RBP27.73■■■□□ 2.03
ITGA4-202ENST00000339307 SSH2Q76I76 1423 aa27.72■■■□□ 2.03
ITGA4-202ENST00000339307 USP6P35125 1406 aa27.72■■■□□ 2.03
ITGA4-202ENST00000339307 BRD4O60885 1362 aaPredicted RBP27.71■■■□□ 2.03
ITGA4-202ENST00000339307 CPDO75976 1380 aa27.7■■■□□ 2.03
ITGA4-202ENST00000339307 THSD7AQ9UPZ6 1657 aa27.7■■■□□ 2.02
ITGA4-202ENST00000339307 CAMTA1Q9Y6Y1 1673 aa27.69■■■□□ 2.02
ITGA4-202ENST00000339307 EN1Q05925 392 aaPredicted RBP27.69■■■□□ 2.02
ITGA4-202ENST00000339307 PDE3BQ13370 1112 aa27.69■■■□□ 2.02
ITGA4-202ENST00000339307 TCP11L2Q8N4U5 519 aa27.67■■■□□ 2.02
ITGA4-202ENST00000339307 CARD11Q9BXL7 1154 aa27.67■■■□□ 2.02
ITGA4-202ENST00000339307 FAM196AQ6ZSG2 479 aa27.67■■■□□ 2.02
ITGA4-202ENST00000339307 SOX12O15370 315 aa27.66■■■□□ 2.02
ITGA4-202ENST00000339307 TRIM37O94972 964 aa27.66■■■□□ 2.02
ITGA4-202ENST00000339307 BARGINQ6ZT62 677 aa27.66■■■□□ 2.02
ITGA4-202ENST00000339307 ZNF692Q9BU19 519 aaPredicted RBP27.66■■■□□ 2.02
ITGA4-202ENST00000339307 TONSLQ96HA7 1378 aa27.64■■■□□ 2.02
ITGA4-202ENST00000339307 PSDA5PKW4 1024 aaPredicted RBP27.64■■■□□ 2.02
ITGA4-202ENST00000339307 RGPD1P0DJD0 1748 aa27.64■■■□□ 2.01
ITGA4-202ENST00000339307 LMO7Q8WWI1 1683 aa27.62■■■□□ 2.01
ITGA4-202ENST00000339307 TTC21BQ7Z4L5 1316 aa27.61■■■□□ 2.01
ITGA4-202ENST00000339307 THRAP3Q9Y2W1 955 aaKnown RBP27.6■■■□□ 2.01
ITGA4-202ENST00000339307 COL5A2P05997 1499 aaPredicted RBP27.6■■■□□ 2.01
ITGA4-202ENST00000339307 TOM1L2Q6ZVM7 507 aa27.59■■■□□ 2.01
ITGA4-202ENST00000339307 KTN1Q86UP2 1357 aaKnown RBP27.59■■■□□ 2.01
ITGA4-202ENST00000339307 APBA3O96018 575 aa27.58■■■□□ 2.01
ITGA4-202ENST00000339307 EZH2Q15910 746 aaKnown RBP27.58■■■□□ 2.01
ITGA4-202ENST00000339307 TMC1Q8TDI8 760 aa27.58■■■□□ 2.01
ITGA4-202ENST00000339307 SRCAPQ6ZRS2 3230 aa27.58■■■□□ 2.01
ITGA4-202ENST00000339307 PIK3C2AO00443 1686 aa27.58■■■□□ 2.01
ITGA4-202ENST00000339307 AATKQ6ZMQ8 1374 aa27.57■■■□□ 2
ITGA4-202ENST00000339307 KCNH5Q8NCM2 988 aa27.57■■■□□ 2
ITGA4-202ENST00000339307 SLIT3O75094 1523 aa27.57■■■□□ 2
ITGA4-202ENST00000339307 CRB1P82279 1406 aa27.56■■■□□ 2
ITGA4-202ENST00000339307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.56■■■□□ 2
ITGA4-202ENST00000339307 TTC21AQ8NDW8 1320 aa27.55■■■□□ 2
ITGA4-202ENST00000339307 CSB-PGBD3P0DP91 1061 aa27.54■■■□□ 2
ITGA4-202ENST00000339307 AKAP12Q02952 1782 aa27.53■■■□□ 2
ITGA4-202ENST00000339307 R3HDM1Q15032 1099 aaKnown RBP27.53■■■□□ 2
ITGA4-202ENST00000339307 TNS1Q9HBL0 1735 aaKnown RBP27.53■■■□□ 2
ITGA4-202ENST00000339307 AXIN2Q9Y2T1 843 aa27.53■■■□□ 2
ITGA4-202ENST00000339307 CPSF1Q10570 1443 aaKnown RBP27.51■■□□□ 1.99
ITGA4-202ENST00000339307 ARHGEF25Q86VW2 580 aa27.5■■□□□ 1.99
ITGA4-202ENST00000339307 DISP2A7MBM2 1401 aa27.5■■□□□ 1.99
ITGA4-202ENST00000339307 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
ITGA4-202ENST00000339307 HDGFL2Q7Z4V5 671 aaPredicted RBP27.5■■□□□ 1.99
ITGA4-202ENST00000339307 CAMKK2Q96RR4 588 aa27.5■■□□□ 1.99
ITGA4-202ENST00000339307 DDB1Q16531 1140 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms