RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SPINK5Q9NQ38 1064 aaPredicted RBP24.22■■□□□ 1.47
PSPC1-201ENST00000338910 CFAP53Q96M91 514 aa24.22■■□□□ 1.47
PSPC1-201ENST00000338910 NSD2O96028 1365 aa24.22■■□□□ 1.47
PSPC1-201ENST00000338910 TECPR2O15040 1411 aa24.2■■□□□ 1.46
PSPC1-201ENST00000338910 WASLO00401 505 aaPredicted RBP24.2■■□□□ 1.46
PSPC1-201ENST00000338910 FYB1O15117 783 aa24.19■■□□□ 1.46
PSPC1-201ENST00000338910 NEUROD2Q15784 382 aa24.19■■□□□ 1.46
PSPC1-201ENST00000338910 HDGFL2Q7Z4V5 671 aaPredicted RBP24.19■■□□□ 1.46
PSPC1-201ENST00000338910 THEMISQ8N1K5 641 aaPredicted RBP24.19■■□□□ 1.46
PSPC1-201ENST00000338910 UBE2Q2Q8WVN8 375 aa24.19■■□□□ 1.46
PSPC1-201ENST00000338910 FAM135BQ49AJ0 1406 aa24.19■■□□□ 1.46
PSPC1-201ENST00000338910 SIRT1Q96EB6 747 aa24.19■■□□□ 1.46
PSPC1-201ENST00000338910 FRAT2O75474 233 aaPredicted RBP24.18■■□□□ 1.46
PSPC1-201ENST00000338910 DMRT2Q9Y5R5 561 aa24.18■■□□□ 1.46
PSPC1-201ENST00000338910 ROBO2Q9HCK4 1378 aa24.17■■□□□ 1.46
PSPC1-201ENST00000338910 KNDC1Q76NI1 1749 aa24.17■■□□□ 1.46
PSPC1-201ENST00000338910 SLIT1O75093 1534 aa24.17■■□□□ 1.46
PSPC1-201ENST00000338910 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
PSPC1-201ENST00000338910 RRP7AQ9Y3A4 280 aaKnown RBP24.16■■□□□ 1.46
PSPC1-201ENST00000338910 CPS1P31327 1500 aa24.16■■□□□ 1.46
PSPC1-201ENST00000338910 TRMT2AQ8IZ69 625 aaKnown RBP24.16■■□□□ 1.46
PSPC1-201ENST00000338910 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
PSPC1-201ENST00000338910 SHPRHQ149N8 1683 aa24.14■■□□□ 1.46
PSPC1-201ENST00000338910 WWC1Q8IX03 1113 aa24.14■■□□□ 1.45
PSPC1-201ENST00000338910 MED14O60244 1454 aa24.13■■□□□ 1.45
PSPC1-201ENST00000338910 U2AF1L5P0DN76 240 aaPredicted RBP24.13■■□□□ 1.45
PSPC1-201ENST00000338910 U2AF1Q01081 240 aaKnown RBP eCLIP24.13■■□□□ 1.453e-8■□□□□ 10.5
PSPC1-201ENST00000338910 TCP11L2Q8N4U5 519 aa24.13■■□□□ 1.45
PSPC1-201ENST00000338910 NGEFQ8N5V2 710 aa24.13■■□□□ 1.45
PSPC1-201ENST00000338910 NCKAP5LQ9HCH0 1330 aa24.13■■□□□ 1.45
PSPC1-201ENST00000338910 RIMS1Q86UR5 1692 aaKnown RBP24.13■■□□□ 1.45
PSPC1-201ENST00000338910 E9PSI1 815 aa24.12■■□□□ 1.45
PSPC1-201ENST00000338910 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.12■■□□□ 1.45
PSPC1-201ENST00000338910 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
PSPC1-201ENST00000338910 PTPRUQ92729 1446 aa24.11■■□□□ 1.45
PSPC1-201ENST00000338910 FAM43AQ8N2R8 423 aa24.11■■□□□ 1.45
PSPC1-201ENST00000338910 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
PSPC1-201ENST00000338910 ATP7BP35670 1465 aa24.09■■□□□ 1.45
PSPC1-201ENST00000338910 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
PSPC1-201ENST00000338910 TBX22Q9Y458 520 aa24.09■■□□□ 1.45
PSPC1-201ENST00000338910 CCDC61Q9Y6R9 512 aa24.08■■□□□ 1.45
PSPC1-201ENST00000338910 U2SURPO15042 1029 aaKnown RBP24.08■■□□□ 1.44
PSPC1-201ENST00000338910 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.08■■□□□ 1.44
PSPC1-201ENST00000338910 NKTRP30414 1462 aaKnown RBP24.06■■□□□ 1.44
PSPC1-201ENST00000338910 RGS3P49796 1198 aa24.06■■□□□ 1.44
PSPC1-201ENST00000338910 CEP170BQ9Y4F5 1589 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-201ENST00000338910 EIF5BO60841 1220 aaKnown RBP24.05■■□□□ 1.44
PSPC1-201ENST00000338910 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.05■■□□□ 1.44
PSPC1-201ENST00000338910 FBLN1P23142 703 aa24.05■■□□□ 1.44
PSPC1-201ENST00000338910 CPSF1Q10570 1443 aaKnown RBP24.05■■□□□ 1.44
PSPC1-201ENST00000338910 PRR36Q9H6K5 1346 aa24.05■■□□□ 1.44
PSPC1-201ENST00000338910 RSPH6AQ9H0K4 717 aa24.04■■□□□ 1.44
PSPC1-201ENST00000338910 VIRMAQ69YN4 1812 aaKnown RBP24.04■■□□□ 1.44
PSPC1-201ENST00000338910 NUTM2FA1L443 756 aa24.04■■□□□ 1.44
PSPC1-201ENST00000338910 ANKRD26Q9UPS8 1709 aa24.04■■□□□ 1.44
PSPC1-201ENST00000338910 BCAR3O75815 825 aa24.03■■□□□ 1.44
PSPC1-201ENST00000338910 KIF20BQ96Q89 1820 aa24.02■■□□□ 1.44
PSPC1-201ENST00000338910 ADAMTSL3P82987 1691 aa24.01■■□□□ 1.43
PSPC1-201ENST00000338910 USP19O94966 1318 aa24.01■■□□□ 1.43
PSPC1-201ENST00000338910 PHF23Q9BUL5 403 aaPredicted RBP24■■□□□ 1.43
PSPC1-201ENST00000338910 IQSEC2Q5JU85 1478 aa24■■□□□ 1.43
PSPC1-201ENST00000338910 EDC4Q6P2E9 1401 aaKnown RBP23.99■■□□□ 1.43
PSPC1-201ENST00000338910 NME9Q86XW9 330 aa23.98■■□□□ 1.43
PSPC1-201ENST00000338910 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
PSPC1-201ENST00000338910 ADGRB2O60241 1585 aa23.98■■□□□ 1.43
PSPC1-201ENST00000338910 DIAPH1O60610 1272 aaKnown RBP23.98■■□□□ 1.43
PSPC1-201ENST00000338910 WDR63Q8IWG1 891 aa23.98■■□□□ 1.43
PSPC1-201ENST00000338910 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
PSPC1-201ENST00000338910 ZRANB1Q9UGI0 708 aa23.96■■□□□ 1.43
PSPC1-201ENST00000338910 DIP2AQ14689 1571 aa23.96■■□□□ 1.43
PSPC1-201ENST00000338910 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
PSPC1-201ENST00000338910 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
PSPC1-201ENST00000338910 COL3A1P02461 1466 aaPredicted RBP23.95■■□□□ 1.42
PSPC1-201ENST00000338910 PTCH1Q13635 1447 aa23.95■■□□□ 1.42
PSPC1-201ENST00000338910 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
PSPC1-201ENST00000338910 ZNF692Q9BU19 519 aaPredicted RBP23.94■■□□□ 1.42
PSPC1-201ENST00000338910 KCNA6P17658 529 aa23.94■■□□□ 1.42
PSPC1-201ENST00000338910 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
PSPC1-201ENST00000338910 SETD1BQ9UPS6 1966 aaKnown RBP23.92■■□□□ 1.42
PSPC1-201ENST00000338910 ACEP12821 1306 aa23.92■■□□□ 1.42
PSPC1-201ENST00000338910 MON2Q7Z3U7 1717 aa23.92■■□□□ 1.42
PSPC1-201ENST00000338910 MAPK8IP3Q9UPT6 1336 aa23.92■■□□□ 1.42
PSPC1-201ENST00000338910 TMPOP42166 694 aaKnown RBP23.91■■□□□ 1.42
PSPC1-201ENST00000338910 AKAP12Q02952 1782 aa23.91■■□□□ 1.42
PSPC1-201ENST00000338910 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
PSPC1-201ENST00000338910 IGHDP01880 384 aa23.9■■□□□ 1.42
PSPC1-201ENST00000338910 EMILIN1Q9Y6C2 1016 aa23.9■■□□□ 1.42
PSPC1-201ENST00000338910 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.42
PSPC1-201ENST00000338910 PLEKHG3A1L390 1219 aa23.89■■□□□ 1.42
PSPC1-201ENST00000338910 COG3Q96JB2 828 aa23.89■■□□□ 1.42
PSPC1-201ENST00000338910 XRN1Q8IZH2 1706 aaKnown RBP23.89■■□□□ 1.41
PSPC1-201ENST00000338910 NCBP3Q53F19 620 aaKnown RBP23.88■■□□□ 1.41
PSPC1-201ENST00000338910 TOPAZ1Q8N9V7 1692 aa23.88■■□□□ 1.41
PSPC1-201ENST00000338910 MAP2P11137 1827 aaKnown RBP23.88■■□□□ 1.41
PSPC1-201ENST00000338910 SEC24BO95487 1268 aa23.88■■□□□ 1.41
PSPC1-201ENST00000338910 MYH16Q9H6N6 1097 aa23.88■■□□□ 1.41
PSPC1-201ENST00000338910 CANXP27824 592 aaKnown RBP23.87■■□□□ 1.41
PSPC1-201ENST00000338910 BECN1Q14457 450 aa23.87■■□□□ 1.41
PSPC1-201ENST00000338910 TRIM35Q9UPQ4 493 aa23.87■■□□□ 1.41
PSPC1-201ENST00000338910 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms