RNA–Protein interactions for RNA: ENST00000336708.11

TRIM16-201, Transcript of tripartite motif containing 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-201ENST00000336708 LAS1LQ9Y4W2 734 aaKnown RBP12.72□□□□□ -0.37
TRIM16-201ENST00000336708 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
TRIM16-201ENST00000336708 MLECQ14165 292 aa12.72□□□□□ -0.37
TRIM16-201ENST00000336708 PLEKHF1Q96S99 279 aa12.71□□□□□ -0.37
TRIM16-201ENST00000336708 TMEM2Q9UHN6 1383 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 C3P01024 1663 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 TOPAZ1Q8N9V7 1692 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 ANP32AP39687 249 aaKnown RBP12.7□□□□□ -0.38
TRIM16-201ENST00000336708 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
TRIM16-201ENST00000336708 WAPLQ7Z5K2 1190 aa12.69□□□□□ -0.38
TRIM16-201ENST00000336708 MAP2P11137 1827 aaKnown RBP12.69□□□□□ -0.38
TRIM16-201ENST00000336708 EDC4Q6P2E9 1401 aaKnown RBP12.69□□□□□ -0.38
TRIM16-201ENST00000336708 HDGFP51858 240 aaKnown RBP12.69□□□□□ -0.38
TRIM16-201ENST00000336708 PDE3AQ14432 1141 aa12.69□□□□□ -0.38
TRIM16-201ENST00000336708 ADAMTS13Q76LX8 1427 aa12.69□□□□□ -0.38
TRIM16-201ENST00000336708 BCAR3O75815 825 aa12.68□□□□□ -0.38
TRIM16-201ENST00000336708 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
TRIM16-201ENST00000336708 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
TRIM16-201ENST00000336708 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
TRIM16-201ENST00000336708 SENP3Q9H4L4 574 aaPredicted RBP12.68□□□□□ -0.38
TRIM16-201ENST00000336708 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
TRIM16-201ENST00000336708 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.67□□□□□ -0.38
TRIM16-201ENST00000336708 SLIT1O75093 1534 aa12.67□□□□□ -0.38
TRIM16-201ENST00000336708 PPIP5K1Q6PFW1 1433 aa12.67□□□□□ -0.38
TRIM16-201ENST00000336708 PLEKHG1Q9ULL1 1385 aa12.67□□□□□ -0.38
TRIM16-201ENST00000336708 U2AF1L5P0DN76 240 aaPredicted RBP12.66□□□□□ -0.38
TRIM16-201ENST00000336708 U2AF1Q01081 240 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM16-201ENST00000336708 RRP7AQ9Y3A4 280 aaKnown RBP12.66□□□□□ -0.38
TRIM16-201ENST00000336708 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
TRIM16-201ENST00000336708 RARSP54136 660 aaKnown RBP12.65□□□□□ -0.38
TRIM16-201ENST00000336708 BACH2Q9BYV9 841 aa12.65□□□□□ -0.38
TRIM16-201ENST00000336708 LRRC7Q96NW7 1537 aa12.65□□□□□ -0.38
TRIM16-201ENST00000336708 AATKQ6ZMQ8 1374 aa12.65□□□□□ -0.38
TRIM16-201ENST00000336708 FER1L4A9Z1Z3 1794 aa12.65□□□□□ -0.38
TRIM16-201ENST00000336708 IL16Q14005 1332 aa12.65□□□□□ -0.38
TRIM16-201ENST00000336708 NEFMP07197 916 aa12.65□□□□□ -0.39
TRIM16-201ENST00000336708 BRPF3Q9ULD4 1205 aa12.65□□□□□ -0.39
TRIM16-201ENST00000336708 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
TRIM16-201ENST00000336708 CT47B1P0C2W7 299 aaPredicted RBP12.64□□□□□ -0.39
TRIM16-201ENST00000336708 PDE4AP27815 886 aa12.64□□□□□ -0.39
TRIM16-201ENST00000336708 MYH16Q9H6N6 1097 aa12.64□□□□□ -0.39
TRIM16-201ENST00000336708 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
TRIM16-201ENST00000336708 TMPOP42166 694 aaKnown RBP12.63□□□□□ -0.39
TRIM16-201ENST00000336708 AAMPQ13685 434 aa12.63□□□□□ -0.39
TRIM16-201ENST00000336708 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
TRIM16-201ENST00000336708 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
TRIM16-201ENST00000336708 IPO9Q96P70 1041 aaKnown RBP12.63□□□□□ -0.39
TRIM16-201ENST00000336708 NALCNQ8IZF0 1738 aa12.63□□□□□ -0.39
TRIM16-201ENST00000336708 DIP2AQ14689 1571 aa12.63□□□□□ -0.39
TRIM16-201ENST00000336708 PNNQ9H307 717 aaKnown RBP12.62□□□□□ -0.39
TRIM16-201ENST00000336708 POLKQ9UBT6 870 aa12.62□□□□□ -0.39
TRIM16-201ENST00000336708 ROBO2Q9HCK4 1378 aa12.62□□□□□ -0.39
TRIM16-201ENST00000336708 VIRMAQ69YN4 1812 aaKnown RBP12.62□□□□□ -0.39
TRIM16-201ENST00000336708 RIMS1Q86UR5 1692 aaKnown RBP12.62□□□□□ -0.39
TRIM16-201ENST00000336708 TXNDC2Q86VQ3 553 aa12.62□□□□□ -0.39
TRIM16-201ENST00000336708 ADAMTSL3P82987 1691 aa12.62□□□□□ -0.39
TRIM16-201ENST00000336708 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
TRIM16-201ENST00000336708 FCHSD2O94868 740 aa12.61□□□□□ -0.39
TRIM16-201ENST00000336708 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
TRIM16-201ENST00000336708 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
TRIM16-201ENST00000336708 PTPRUQ92729 1446 aa12.6□□□□□ -0.39
TRIM16-201ENST00000336708 PRR36Q9H6K5 1346 aa12.6□□□□□ -0.39
TRIM16-201ENST00000336708 RSPH6AQ9H0K4 717 aa12.59□□□□□ -0.39
TRIM16-201ENST00000336708 LTKP29376 864 aa12.59□□□□□ -0.39
TRIM16-201ENST00000336708 MAPK8IP3Q9UPT6 1336 aa12.59□□□□□ -0.39
TRIM16-201ENST00000336708 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
TRIM16-201ENST00000336708 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.39
TRIM16-201ENST00000336708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.58□□□□□ -0.39
TRIM16-201ENST00000336708 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.39
TRIM16-201ENST00000336708 CLUAP1Q96AJ1 413 aa12.58□□□□□ -0.4
TRIM16-201ENST00000336708 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.4
TRIM16-201ENST00000336708 PANK1Q8TE04 598 aa12.57□□□□□ -0.4
TRIM16-201ENST00000336708 IL13P35225 146 aa12.57□□□□□ -0.4
TRIM16-201ENST00000336708 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 NME9Q86XW9 330 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 RGPD1P0DJD0 1748 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 OVOS2A0A0J9YW53 1432 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 OVOS2Q6IE36 1432 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 PLEKHG3A1L390 1219 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 IGHDP01880 384 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
TRIM16-201ENST00000336708 RIPK4P57078 832 aa12.55□□□□□ -0.4
TRIM16-201ENST00000336708 COG6Q9Y2V7 657 aa12.55□□□□□ -0.4
TRIM16-201ENST00000336708 RLBP1P12271 317 aa12.55□□□□□ -0.4
TRIM16-201ENST00000336708 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
TRIM16-201ENST00000336708 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
TRIM16-201ENST00000336708 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 TBX22Q9Y458 520 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 PEAK1Q9H792 1746 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 USP6P35125 1406 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
TRIM16-201ENST00000336708 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
TRIM16-201ENST00000336708 COG3Q96JB2 828 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 EMILIN1Q9Y6C2 1016 aa12.54□□□□□ -0.4
TRIM16-201ENST00000336708 FBLN1P23142 703 aa12.53□□□□□ -0.4
TRIM16-201ENST00000336708 C8orf34Q49A92 452 aa12.53□□□□□ -0.4
TRIM16-201ENST00000336708 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms