RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
TUBB2A-201ENST00000333628 SBNO1A3KN83 1393 aa18.56■□□□□ 0.56
TUBB2A-201ENST00000333628 ACEP12821 1306 aa18.56■□□□□ 0.56
TUBB2A-201ENST00000333628 MARF1Q9Y4F3 1742 aaKnown RBP18.55■□□□□ 0.56
TUBB2A-201ENST00000333628 CDCA8Q53HL2 280 aa18.55■□□□□ 0.56
TUBB2A-201ENST00000333628 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
TUBB2A-201ENST00000333628 PLEKHG5O94827 1062 aa18.55■□□□□ 0.56
TUBB2A-201ENST00000333628 POTEAQ6S8J7 498 aa18.54■□□□□ 0.56
TUBB2A-201ENST00000333628 ABCA3Q99758 1704 aa18.54■□□□□ 0.56
TUBB2A-201ENST00000333628 POLR3AO14802 1390 aaPredicted RBP18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 TMC1Q8TDI8 760 aa18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 C8orf37Q96NL8 207 aa18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 SLC12A5Q9H2X9 1139 aa18.53■□□□□ 0.56
TUBB2A-201ENST00000333628 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
TUBB2A-201ENST00000333628 AFF2P51816 1311 aa18.51■□□□□ 0.55
TUBB2A-201ENST00000333628 ARHGEF10O15013 1369 aa18.5■□□□□ 0.55
TUBB2A-201ENST00000333628 NGLY1Q96IV0 654 aa18.49■□□□□ 0.55
TUBB2A-201ENST00000333628 POLR3GLQ9BT43 218 aa18.49■□□□□ 0.55
TUBB2A-201ENST00000333628 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
TUBB2A-201ENST00000333628 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
TUBB2A-201ENST00000333628 AKAP12Q02952 1782 aa18.47■□□□□ 0.55
TUBB2A-201ENST00000333628 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
TUBB2A-201ENST00000333628 CPSF1Q10570 1443 aaKnown RBP18.46■□□□□ 0.55
TUBB2A-201ENST00000333628 HAP1P54257 671 aaPredicted RBP18.46■□□□□ 0.55
TUBB2A-201ENST00000333628 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
TUBB2A-201ENST00000333628 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
TUBB2A-201ENST00000333628 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
TUBB2A-201ENST00000333628 HDGFL2Q7Z4V5 671 aaPredicted RBP18.45■□□□□ 0.54
TUBB2A-201ENST00000333628 CD163L1Q9NR16 1453 aa18.45■□□□□ 0.54
TUBB2A-201ENST00000333628 KIF7Q2M1P5 1343 aa18.44■□□□□ 0.54
TUBB2A-201ENST00000333628 KTN1Q86UP2 1357 aaKnown RBP18.44■□□□□ 0.54
TUBB2A-201ENST00000333628 USP6P35125 1406 aa18.43■□□□□ 0.54
TUBB2A-201ENST00000333628 PHRF1Q9P1Y6 1649 aaKnown RBP18.43■□□□□ 0.54
TUBB2A-201ENST00000333628 CCER2I3L3R5 266 aa18.42■□□□□ 0.54
TUBB2A-201ENST00000333628 FNBP4Q8N3X1 1017 aaPredicted RBP18.42■□□□□ 0.54
TUBB2A-201ENST00000333628 USP21Q9UK80 565 aa18.42■□□□□ 0.54
TUBB2A-201ENST00000333628 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 MON2Q7Z3U7 1717 aa18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
TUBB2A-201ENST00000333628 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
TUBB2A-201ENST00000333628 QTRT2Q9H974 415 aaKnown RBP18.4■□□□□ 0.54
TUBB2A-201ENST00000333628 TTC21BQ7Z4L5 1316 aa18.4■□□□□ 0.54
TUBB2A-201ENST00000333628 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
TUBB2A-201ENST00000333628 NRKQ7Z2Y5 1582 aa18.4■□□□□ 0.54
TUBB2A-201ENST00000333628 PIK3C2AO00443 1686 aa18.39■□□□□ 0.54
TUBB2A-201ENST00000333628 WASHC2AQ641Q2 1341 aa18.39■□□□□ 0.53
TUBB2A-201ENST00000333628 SLIT2O94813 1529 aa18.39■□□□□ 0.53
TUBB2A-201ENST00000333628 CCDC7Q96M83 1385 aa18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 MYOM1P52179 1685 aa18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.38■□□□□ 0.53
TUBB2A-201ENST00000333628 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
TUBB2A-201ENST00000333628 TTC21AQ8NDW8 1320 aa18.36■□□□□ 0.53
TUBB2A-201ENST00000333628 RXRBP28702 533 aa18.36■□□□□ 0.53
TUBB2A-201ENST00000333628 PANK3Q9H999 370 aa18.36■□□□□ 0.53
TUBB2A-201ENST00000333628 EDC4Q6P2E9 1401 aaKnown RBP18.35■□□□□ 0.53
TUBB2A-201ENST00000333628 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
TUBB2A-201ENST00000333628 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
TUBB2A-201ENST00000333628 ATRNO75882 1429 aa18.35■□□□□ 0.53
TUBB2A-201ENST00000333628 USP19O94966 1318 aa18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 NLRP6P59044 892 aa18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 ZC3H6P61129 1189 aaKnown RBP18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 NME9Q86XW9 330 aa18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 UNC5CLQ8IV45 518 aa18.34■□□□□ 0.53
TUBB2A-201ENST00000333628 NRAPQ86VF7 1730 aa18.33■□□□□ 0.53
TUBB2A-201ENST00000333628 KIAA0232Q92628 1395 aa18.33■□□□□ 0.53
TUBB2A-201ENST00000333628 ANP32CO43423 234 aa18.33■□□□□ 0.52
TUBB2A-201ENST00000333628 RBM6P78332 1123 aaKnown RBP18.33■□□□□ 0.52
TUBB2A-201ENST00000333628 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.52
TUBB2A-201ENST00000333628 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
TUBB2A-201ENST00000333628 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
TUBB2A-201ENST00000333628 BTG4Q9NY30 223 aa18.31■□□□□ 0.52
TUBB2A-201ENST00000333628 GCP02774 474 aa18.3■□□□□ 0.52
TUBB2A-201ENST00000333628 SLIT3O75094 1523 aa18.3■□□□□ 0.52
TUBB2A-201ENST00000333628 GLI3P10071 1580 aa18.3■□□□□ 0.52
TUBB2A-201ENST00000333628 RGS12O14924 1447 aa18.3■□□□□ 0.52
TUBB2A-201ENST00000333628 FYB1O15117 783 aa18.3■□□□□ 0.52
TUBB2A-201ENST00000333628 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
TUBB2A-201ENST00000333628 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
TUBB2A-201ENST00000333628 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
TUBB2A-201ENST00000333628 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
TUBB2A-201ENST00000333628 USP54Q70EL1 1684 aa18.26■□□□□ 0.51
TUBB2A-201ENST00000333628 LMO7Q8WWI1 1683 aa18.26■□□□□ 0.51
TUBB2A-201ENST00000333628 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
TUBB2A-201ENST00000333628 CPDO75976 1380 aa18.26■□□□□ 0.51
TUBB2A-201ENST00000333628 SOX12O15370 315 aa18.25■□□□□ 0.51
TUBB2A-201ENST00000333628 PER1O15534 1290 aaPredicted RBP18.25■□□□□ 0.51
TUBB2A-201ENST00000333628 VPS72Q15906 364 aa18.25■□□□□ 0.51
TUBB2A-201ENST00000333628 CCDC9Q9Y3X0 531 aaKnown RBP18.25■□□□□ 0.51
TUBB2A-201ENST00000333628 CAMTA1Q9Y6Y1 1673 aa18.25■□□□□ 0.51
TUBB2A-201ENST00000333628 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms