RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ZKSCAN1P17029 563 aaPredicted RBP15.89■□□□□ 0.13
VSTM4-202ENST00000332853 DCTN1Q14203 1278 aa15.89■□□□□ 0.13
VSTM4-202ENST00000332853 STRN4Q9NRL3 753 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 APPP05067 770 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
VSTM4-202ENST00000332853 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.88■□□□□ 0.13
VSTM4-202ENST00000332853 NME9Q86XW9 330 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 FOSBP53539 338 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 CLSTN1O94985 981 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 CEBPAP49715 358 aaPredicted RBP15.88■□□□□ 0.13
VSTM4-202ENST00000332853 NFKBIBQ15653 356 aa15.88■□□□□ 0.13
VSTM4-202ENST00000332853 CREBRFQ8IUR6 639 aa15.87■□□□□ 0.13
VSTM4-202ENST00000332853 WDR62O43379 1518 aa15.87■□□□□ 0.13
VSTM4-202ENST00000332853 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
VSTM4-202ENST00000332853 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 SCAF11Q99590 1463 aaKnown RBP15.86■□□□□ 0.13
VSTM4-202ENST00000332853 MSH5O43196 834 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 PHF14O94880 888 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 FCHSD2O94868 740 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 BACH2Q9BYV9 841 aa15.86■□□□□ 0.13
VSTM4-202ENST00000332853 ERC2O15083 957 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 HSP90AB4PQ58FF6 505 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 MCM10Q7L590 875 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 RASSF8Q8NHQ8 419 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 GNAI3P08754 354 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 ZNF530Q6P9A1 599 aaPredicted RBP15.85■□□□□ 0.13
VSTM4-202ENST00000332853 EMILIN1Q9Y6C2 1016 aa15.85■□□□□ 0.13
VSTM4-202ENST00000332853 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
VSTM4-202ENST00000332853 GNAI2P04899 355 aa15.84■□□□□ 0.13
VSTM4-202ENST00000332853 NFE2L2Q16236 605 aa15.84■□□□□ 0.13
VSTM4-202ENST00000332853 TMEM57Q8N5G2 664 aa15.84■□□□□ 0.13
VSTM4-202ENST00000332853 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
VSTM4-202ENST00000332853 MAP4K4O95819 1239 aaPredicted RBP15.84■□□□□ 0.13
VSTM4-202ENST00000332853 KIF3AQ9Y496 699 aa15.84■□□□□ 0.13
VSTM4-202ENST00000332853 SKOR2Q2VWA4 1001 aaPredicted RBP15.84■□□□□ 0.13
VSTM4-202ENST00000332853 KDM5BQ9UGL1 1544 aa15.83■□□□□ 0.12
VSTM4-202ENST00000332853 VPS37CA5D8V6 355 aaPredicted RBP15.83■□□□□ 0.12
VSTM4-202ENST00000332853 GCC1Q96CN9 775 aa15.83■□□□□ 0.12
VSTM4-202ENST00000332853 MYL6BP14649 208 aa15.83■□□□□ 0.12
VSTM4-202ENST00000332853 FBLN1P23142 703 aa15.83■□□□□ 0.12
VSTM4-202ENST00000332853 TPM4P67936 248 aa15.83■□□□□ 0.12
VSTM4-202ENST00000332853 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
VSTM4-202ENST00000332853 EIF4G3O43432 1585 aaKnown RBP15.82■□□□□ 0.12
VSTM4-202ENST00000332853 PLCH2O75038 1416 aa15.82■□□□□ 0.12
VSTM4-202ENST00000332853 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
VSTM4-202ENST00000332853 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 TATP17735 454 aaPredicted RBP15.81■□□□□ 0.12
VSTM4-202ENST00000332853 USHBP1Q8N6Y0 703 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 ATP6V1DQ9Y5K8 247 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
VSTM4-202ENST00000332853 RNF20Q5VTR2 975 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
VSTM4-202ENST00000332853 VPS37DQ86XT2 251 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 CNTROBQ8N137 903 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 SMC3Q9UQE7 1217 aa15.81■□□□□ 0.12
VSTM4-202ENST00000332853 ZC3H6P61129 1189 aaKnown RBP15.81■□□□□ 0.12
VSTM4-202ENST00000332853 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
VSTM4-202ENST00000332853 TCOF1Q13428 1488 aaKnown RBP15.8■□□□□ 0.12
VSTM4-202ENST00000332853 DNAJC2Q99543 621 aaKnown RBP15.8■□□□□ 0.12
VSTM4-202ENST00000332853 SIL1Q9H173 461 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 CLASRPQ8N2M8 674 aaKnown RBP15.8■□□□□ 0.12
VSTM4-202ENST00000332853 CT47B1P0C2W7 299 aaPredicted RBP15.8■□□□□ 0.12
VSTM4-202ENST00000332853 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 TRAPPC8Q9Y2L5 1435 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 LRRFIP1Q32MZ4 808 aaKnown RBP15.8■□□□□ 0.12
VSTM4-202ENST00000332853 CHD1LQ86WJ1 897 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
VSTM4-202ENST00000332853 RARSP54136 660 aaKnown RBP15.79■□□□□ 0.12
VSTM4-202ENST00000332853 WASHC4Q2M389 1173 aa15.79■□□□□ 0.12
VSTM4-202ENST00000332853 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
VSTM4-202ENST00000332853 TOM1L2Q6ZVM7 507 aa15.79■□□□□ 0.12
VSTM4-202ENST00000332853 SSH1Q8WYL5 1049 aa15.79■□□□□ 0.12
VSTM4-202ENST00000332853 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
VSTM4-202ENST00000332853 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
VSTM4-202ENST00000332853 NKTRP30414 1462 aaKnown RBP15.78■□□□□ 0.12
VSTM4-202ENST00000332853 CCT4P50991 539 aaKnown RBP15.78■□□□□ 0.12
VSTM4-202ENST00000332853 CABP4P57796 275 aa15.78■□□□□ 0.12
VSTM4-202ENST00000332853 RALGAPBQ86X10 1494 aa15.78■□□□□ 0.12
VSTM4-202ENST00000332853 KDM4AO75164 1064 aa15.78■□□□□ 0.12
VSTM4-202ENST00000332853 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
VSTM4-202ENST00000332853 AKAP17AQ02040 695 aaKnown RBP15.77■□□□□ 0.12
VSTM4-202ENST00000332853 AMOTL2Q9Y2J4 779 aa15.77■□□□□ 0.12
VSTM4-202ENST00000332853 NEK4P51957 841 aa15.77■□□□□ 0.12
VSTM4-202ENST00000332853 CPLX1O14810 134 aa15.77■□□□□ 0.11
VSTM4-202ENST00000332853 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.11
VSTM4-202ENST00000332853 FBXW7Q969H0 707 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 NUCB2P80303 420 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 LRRCC1Q9C099 1032 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 NFXL1Q6ZNB6 911 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 FYB1O15117 783 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 SRCIN1Q9C0H9 1055 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 PRAG1Q86YV5 1406 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 RAD21O60216 631 aa15.76■□□□□ 0.11
VSTM4-202ENST00000332853 TRDNQ13061 729 aa15.75■□□□□ 0.11
VSTM4-202ENST00000332853 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
VSTM4-202ENST00000332853 VPS53Q5VIR6 699 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms