RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 KDM4AO75164 1064 aa18.47■□□□□ 0.55
PTPN21-201ENST00000328736 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
PTPN21-201ENST00000328736 CCP110O43303 1012 aa18.46■□□□□ 0.55
PTPN21-201ENST00000328736 CLASRPQ8N2M8 674 aaKnown RBP18.46■□□□□ 0.55
PTPN21-201ENST00000328736 CCDC39Q9UFE4 941 aa18.46■□□□□ 0.55
PTPN21-201ENST00000328736 ERC1Q8IUD2 1116 aa18.46■□□□□ 0.55
PTPN21-201ENST00000328736 BCL11BQ9C0K0 894 aaPredicted RBP18.45■□□□□ 0.54
PTPN21-201ENST00000328736 CUX1P39880 1505 aa18.45■□□□□ 0.54
PTPN21-201ENST00000328736 PLEKHO1Q53GL0 409 aaPredicted RBP18.45■□□□□ 0.54
PTPN21-201ENST00000328736 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
PTPN21-201ENST00000328736 KRT18P05783 430 aaKnown RBP18.45■□□□□ 0.54
PTPN21-201ENST00000328736 FAM69CQ0P6D2 419 aa18.44■□□□□ 0.54
PTPN21-201ENST00000328736 CCDC191Q8NCU4 936 aa18.44■□□□□ 0.54
PTPN21-201ENST00000328736 ZNF396Q96N95 335 aaPredicted RBP18.44■□□□□ 0.54
PTPN21-201ENST00000328736 TTC39AQ5SRH9 613 aa18.43■□□□□ 0.54
PTPN21-201ENST00000328736 NLRP6P59044 892 aa18.43■□□□□ 0.54
PTPN21-201ENST00000328736 DNAJC2Q99543 621 aaKnown RBP18.43■□□□□ 0.54
PTPN21-201ENST00000328736 C1orf115Q9H7X2 142 aa18.42■□□□□ 0.54
PTPN21-201ENST00000328736 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPN21-201ENST00000328736 CCDC158Q5M9N0 1113 aa18.42■□□□□ 0.54
PTPN21-201ENST00000328736 ZRSR2Q15696 482 aaKnown RBP18.42■□□□□ 0.54
PTPN21-201ENST00000328736 KINO60870 393 aaKnown RBP18.41■□□□□ 0.54
PTPN21-201ENST00000328736 ARHGAP5Q13017 1502 aa18.41■□□□□ 0.54
PTPN21-201ENST00000328736 PDCP20941 246 aa18.41■□□□□ 0.54
PTPN21-201ENST00000328736 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
PTPN21-201ENST00000328736 SF3B2Q13435 895 aaKnown RBP18.41■□□□□ 0.54
PTPN21-201ENST00000328736 MCM2P49736 904 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 FAM43AQ8N2R8 423 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 MAP7D2Q96T17 732 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 RBM42Q9BTD8 480 aaKnown RBP18.4■□□□□ 0.54
PTPN21-201ENST00000328736 ANKRD50Q9ULJ7 1429 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 CNNM1Q9NRU3 951 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 MTHFSP49914 203 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
PTPN21-201ENST00000328736 ERLIN2O94905 339 aa18.39■□□□□ 0.54
PTPN21-201ENST00000328736 SURF6O75683 361 aaKnown RBP18.39■□□□□ 0.53
PTPN21-201ENST00000328736 SMC2O95347 1197 aa18.39■□□□□ 0.53
PTPN21-201ENST00000328736 AFAP1Q8N556 730 aa18.39■□□□□ 0.53
PTPN21-201ENST00000328736 CWC15Q9P013 229 aaKnown RBP18.39■□□□□ 0.53
PTPN21-201ENST00000328736 FAM177BA6PVY3 158 aa18.38■□□□□ 0.53
PTPN21-201ENST00000328736 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
PTPN21-201ENST00000328736 ANKRD18AQ8IVF6 992 aa18.38■□□□□ 0.53
PTPN21-201ENST00000328736 TXLNBQ8N3L3 684 aa18.38■□□□□ 0.53
PTPN21-201ENST00000328736 ABTB2Q8N961 1025 aa18.38■□□□□ 0.53
PTPN21-201ENST00000328736 TTLL5Q6EMB2 1281 aa18.37■□□□□ 0.53
PTPN21-201ENST00000328736 JMYQ8N9B5 988 aa18.37■□□□□ 0.53
PTPN21-201ENST00000328736 LUC7LQ9NQ29 371 aaKnown RBP18.37■□□□□ 0.53
PTPN21-201ENST00000328736 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
PTPN21-201ENST00000328736 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
PTPN21-201ENST00000328736 ZNHIT6Q9NWK9 470 aaKnown RBP18.37■□□□□ 0.53
PTPN21-201ENST00000328736 CFTRP13569 1480 aa18.37■□□□□ 0.53
PTPN21-201ENST00000328736 MBD3O95983 291 aa18.36■□□□□ 0.53
PTPN21-201ENST00000328736 NACAP1Q9BZK3 213 aa18.36■□□□□ 0.53
PTPN21-201ENST00000328736 DACH1Q9UI36 760 aa18.36■□□□□ 0.53
PTPN21-201ENST00000328736 TRIM5Q9C035 493 aa18.36■□□□□ 0.53
PTPN21-201ENST00000328736 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
PTPN21-201ENST00000328736 FYCO1Q9BQS8 1478 aa18.36■□□□□ 0.53
PTPN21-201ENST00000328736 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 STIM1Q13586 685 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 STK38Q15208 465 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 PDCL3Q9H2J4 239 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 H0YHG0 523 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 ESCO1Q5FWF5 840 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
PTPN21-201ENST00000328736 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
PTPN21-201ENST00000328736 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
PTPN21-201ENST00000328736 PNISRQ8TF01 805 aaKnown RBP18.34■□□□□ 0.53
PTPN21-201ENST00000328736 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
PTPN21-201ENST00000328736 MRE11P49959 708 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 ZSCAN25Q6NSZ9 544 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 TRIM22Q8IYM9 498 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 GNAI2P04899 355 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 VSIG10Q8N0Z9 540 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.53
PTPN21-201ENST00000328736 ATP2B2Q01814 1243 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 AKNAQ7Z591 1439 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 ANKRD1Q15327 319 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 CASKIN1Q8WXD9 1431 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 BCAR3O75815 825 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 SOGA3Q5TF21 947 aa18.33■□□□□ 0.52
PTPN21-201ENST00000328736 NEFHP12036 1026 aa18.32■□□□□ 0.52
PTPN21-201ENST00000328736 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
PTPN21-201ENST00000328736 CCDC69A6NI79 296 aa18.32■□□□□ 0.52
PTPN21-201ENST00000328736 MTERF4Q7Z6M4 381 aaKnown RBP18.32■□□□□ 0.52
PTPN21-201ENST00000328736 EXOSC9Q06265 439 aaKnown RBP18.32■□□□□ 0.52
PTPN21-201ENST00000328736 BRPF1P55201 1214 aaPredicted RBP18.32■□□□□ 0.52
PTPN21-201ENST00000328736 GCC1Q96CN9 775 aa18.32■□□□□ 0.52
PTPN21-201ENST00000328736 SCAPERQ9BY12 1400 aa18.31■□□□□ 0.52
PTPN21-201ENST00000328736 AEBP1Q8IUX7 1158 aa18.31■□□□□ 0.52
PTPN21-201ENST00000328736 CABP4P57796 275 aa18.31■□□□□ 0.52
PTPN21-201ENST00000328736 RABEP1Q15276 862 aa18.31■□□□□ 0.52
PTPN21-201ENST00000328736 PROSER2Q86WR7 435 aaPredicted RBP18.31■□□□□ 0.52
PTPN21-201ENST00000328736 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
PTPN21-201ENST00000328736 HMGB2P26583 209 aaKnown RBP18.3■□□□□ 0.52
PTPN21-201ENST00000328736 SEPT7Q16181 437 aaKnown RBP18.3■□□□□ 0.52
PTPN21-201ENST00000328736 STRN4Q9NRL3 753 aa18.3■□□□□ 0.52
PTPN21-201ENST00000328736 DESP17661 470 aa18.3■□□□□ 0.52
PTPN21-201ENST00000328736 PRKAR2BP31323 418 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms