RNA–Protein interactions for RNA: ENST00000322048.11

ROGDI-201, Transcript of rogdi homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROGDI, Length 1,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROGDI-201ENST00000322048 DDX17Q92841 729 aaKnown RBP30.02■■■□□ 2.4
ROGDI-201ENST00000322048 ANKRD26Q9UPS8 1709 aa30.01■■■□□ 2.39
ROGDI-201ENST00000322048 ANKARQ7Z5J8 1434 aa30■■■□□ 2.39
ROGDI-201ENST00000322048 WDR43Q15061 677 aaKnown RBP eCLIP30■■■□□ 2.39
ROGDI-201ENST00000322048 NUDT16Q96DE0 195 aaKnown RBP30■■■□□ 2.39
ROGDI-201ENST00000322048 BLMP54132 1417 aaPredicted RBP29.98■■■□□ 2.39
ROGDI-201ENST00000322048 PPIP5K1Q6PFW1 1433 aa29.98■■■□□ 2.39
ROGDI-201ENST00000322048 KIF20BQ96Q89 1820 aa29.98■■■□□ 2.39
ROGDI-201ENST00000322048 HSPA1LP34931 641 aa29.98■■■□□ 2.39
ROGDI-201ENST00000322048 PMFBP1Q8TBY8 1022 aa29.96■■■□□ 2.39
ROGDI-201ENST00000322048 CCDC61Q9Y6R9 512 aa29.95■■■□□ 2.38
ROGDI-201ENST00000322048 FOXO3O43524 673 aa29.94■■■□□ 2.38
ROGDI-201ENST00000322048 PHF8Q9UPP1 1060 aa29.94■■■□□ 2.38
ROGDI-201ENST00000322048 ITSN1Q15811 1721 aa29.94■■■□□ 2.38
ROGDI-201ENST00000322048 POLR3AO14802 1390 aaPredicted RBP29.94■■■□□ 2.38
ROGDI-201ENST00000322048 TOPAZ1Q8N9V7 1692 aa29.92■■■□□ 2.38
ROGDI-201ENST00000322048 NHSL1Q5SYE7 1610 aa29.92■■■□□ 2.38
ROGDI-201ENST00000322048 AKAP12Q02952 1782 aa29.91■■■□□ 2.38
ROGDI-201ENST00000322048 PHLPP1O60346 1717 aa29.91■■■□□ 2.38
ROGDI-201ENST00000322048 TNNT2P45379 298 aaPredicted RBP29.91■■■□□ 2.38
ROGDI-201ENST00000322048 XPCQ01831 940 aaPredicted RBP29.91■■■□□ 2.38
ROGDI-201ENST00000322048 CPSF1Q10570 1443 aaKnown RBP29.91■■■□□ 2.38
ROGDI-201ENST00000322048 ADAMTS8Q9UP79 889 aa29.91■■■□□ 2.38
ROGDI-201ENST00000322048 AHDC1Q5TGY3 1603 aaPredicted RBP29.9■■■□□ 2.38
ROGDI-201ENST00000322048 KIF1AQ12756 1690 aa29.89■■■□□ 2.38
ROGDI-201ENST00000322048 MON2Q7Z3U7 1717 aa29.89■■■□□ 2.38
ROGDI-201ENST00000322048 FYB1O15117 783 aa29.88■■■□□ 2.37
ROGDI-201ENST00000322048 EDC4Q6P2E9 1401 aaKnown RBP29.88■■■□□ 2.37
ROGDI-201ENST00000322048 GGNBP2Q9H3C7 697 aa29.87■■■□□ 2.37
ROGDI-201ENST00000322048 CFAP53Q96M91 514 aa29.86■■■□□ 2.37
ROGDI-201ENST00000322048 COL16A1Q07092 1604 aaPredicted RBP29.86■■■□□ 2.37
ROGDI-201ENST00000322048 NPHP3Q7Z494 1330 aa29.86■■■□□ 2.37
ROGDI-201ENST00000322048 SMG6Q86US8 1419 aaKnown RBP29.85■■■□□ 2.37
ROGDI-201ENST00000322048 NEFLP07196 543 aa29.85■■■□□ 2.37
ROGDI-201ENST00000322048 ZNF692Q9BU19 519 aaPredicted RBP29.84■■■□□ 2.37
ROGDI-201ENST00000322048 NGDNQ8NEJ9 315 aaKnown RBP29.83■■■□□ 2.37
ROGDI-201ENST00000322048 PXDNQ92626 1479 aa29.82■■■□□ 2.36
ROGDI-201ENST00000322048 MTHFSP49914 203 aa29.82■■■□□ 2.36
ROGDI-201ENST00000322048 ACEP12821 1306 aa29.82■■■□□ 2.36
ROGDI-201ENST00000322048 PLEKHG3A1L390 1219 aa29.82■■■□□ 2.36
ROGDI-201ENST00000322048 SOS2Q07890 1332 aaPredicted RBP29.82■■■□□ 2.36
ROGDI-201ENST00000322048 SHPRHQ149N8 1683 aa29.81■■■□□ 2.36
ROGDI-201ENST00000322048 SENP3-EIF4A1A0A087X0R7 540 aa29.8■■■□□ 2.36
ROGDI-201ENST00000322048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.8■■■□□ 2.36
ROGDI-201ENST00000322048 PSME1Q06323 249 aa29.79■■■□□ 2.36
ROGDI-201ENST00000322048 PDE3BQ13370 1112 aa29.79■■■□□ 2.36
ROGDI-201ENST00000322048 NUDCQ9Y266 331 aa29.79■■■□□ 2.36
ROGDI-201ENST00000322048 KRT28Q7Z3Y7 464 aa29.79■■■□□ 2.36
ROGDI-201ENST00000322048 SUPT16HQ9Y5B9 1047 aaKnown RBP29.76■■■□□ 2.35
ROGDI-201ENST00000322048 SALL2Q9Y467 1007 aaPredicted RBP29.75■■■□□ 2.35
ROGDI-201ENST00000322048 LRRC59Q96AG4 307 aaKnown RBP29.74■■■□□ 2.35
ROGDI-201ENST00000322048 NRKQ7Z2Y5 1582 aa29.72■■■□□ 2.35
ROGDI-201ENST00000322048 FKBP8Q14318 412 aa29.71■■■□□ 2.35
ROGDI-201ENST00000322048 TRPM3Q9HCF6 1732 aaPredicted RBP29.7■■■□□ 2.35
ROGDI-201ENST00000322048 NME9Q86XW9 330 aa29.69■■■□□ 2.34
ROGDI-201ENST00000322048 PAK3O75914 559 aaPredicted RBP29.68■■■□□ 2.34
ROGDI-201ENST00000322048 CCDC146Q8IYE0 955 aa29.68■■■□□ 2.34
ROGDI-201ENST00000322048 USP6P35125 1406 aa29.68■■■□□ 2.34
ROGDI-201ENST00000322048 SPATA31A3Q5VYP0 1347 aa29.68■■■□□ 2.34
ROGDI-201ENST00000322048 JCADQ9P266 1359 aa29.68■■■□□ 2.34
ROGDI-201ENST00000322048 COG3Q96JB2 828 aa29.68■■■□□ 2.34
ROGDI-201ENST00000322048 PNPLA6Q8IY17 1366 aa29.66■■■□□ 2.34
ROGDI-201ENST00000322048 LMOD2Q6P5Q4 547 aa29.66■■■□□ 2.34
ROGDI-201ENST00000322048 NGEFQ8N5V2 710 aa29.66■■■□□ 2.34
ROGDI-201ENST00000322048 TNS3Q68CZ2 1445 aa29.66■■■□□ 2.34
ROGDI-201ENST00000322048 SBNO1A3KN83 1393 aa29.66■■■□□ 2.34
ROGDI-201ENST00000322048 MAP2P11137 1827 aaKnown RBP29.66■■■□□ 2.34
ROGDI-201ENST00000322048 TTC21BQ7Z4L5 1316 aa29.65■■■□□ 2.34
ROGDI-201ENST00000322048 COL3A1P02461 1466 aaPredicted RBP29.65■■■□□ 2.34
ROGDI-201ENST00000322048 PLEKHG5O94827 1062 aa29.63■■■□□ 2.33
ROGDI-201ENST00000322048 ALS2Q96Q42 1657 aa29.62■■■□□ 2.33
ROGDI-201ENST00000322048 AATKQ6ZMQ8 1374 aa29.62■■■□□ 2.33
ROGDI-201ENST00000322048 SSH2Q76I76 1423 aa29.61■■■□□ 2.33
ROGDI-201ENST00000322048 APAF1O14727 1248 aa29.61■■■□□ 2.33
ROGDI-201ENST00000322048 RUNDC1Q96C34 613 aa29.6■■■□□ 2.33
ROGDI-201ENST00000322048 NUTM2GQ5VZR2 741 aa29.59■■■□□ 2.33
ROGDI-201ENST00000322048 TTC21AQ8NDW8 1320 aa29.59■■■□□ 2.33
ROGDI-201ENST00000322048 POLKQ9UBT6 870 aa29.59■■■□□ 2.33
ROGDI-201ENST00000322048 U2AF1L5P0DN76 240 aaPredicted RBP29.58■■■□□ 2.33
ROGDI-201ENST00000322048 U2AF1Q01081 240 aaKnown RBP eCLIP29.58■■■□□ 2.33
ROGDI-201ENST00000322048 ZRANB1Q9UGI0 708 aa29.58■■■□□ 2.33
ROGDI-201ENST00000322048 ZNF521Q96K83 1311 aa29.57■■■□□ 2.32
ROGDI-201ENST00000322048 DIAPH1O60610 1272 aaKnown RBP29.57■■■□□ 2.32
ROGDI-201ENST00000322048 ARHGEF10O15013 1369 aa29.56■■■□□ 2.32
ROGDI-201ENST00000322048 COL22A1Q8NFW1 1626 aaPredicted RBP29.56■■■□□ 2.32
ROGDI-201ENST00000322048 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
ROGDI-201ENST00000322048 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
ROGDI-201ENST00000322048 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
ROGDI-201ENST00000322048 ABTB2Q8N961 1025 aa29.56■■■□□ 2.32
ROGDI-201ENST00000322048 CABLES1Q8TDN4 633 aa29.56■■■□□ 2.32
ROGDI-201ENST00000322048 CDCA7LQ96GN5 454 aa29.56■■■□□ 2.32
ROGDI-201ENST00000322048 CDK12Q9NYV4 1490 aaPredicted RBP29.54■■■□□ 2.32
ROGDI-201ENST00000322048 OVOS2A0A0J9YW53 1432 aa29.54■■■□□ 2.32
ROGDI-201ENST00000322048 OVOS2Q6IE36 1432 aa29.54■■■□□ 2.32
ROGDI-201ENST00000322048 LRP6O75581 1613 aa29.54■■■□□ 2.32
ROGDI-201ENST00000322048 U2SURPO15042 1029 aaKnown RBP29.54■■■□□ 2.32
ROGDI-201ENST00000322048 GOLGA2Q08379 1002 aa29.54■■■□□ 2.32
ROGDI-201ENST00000322048 PIK3C2AO00443 1686 aa29.53■■■□□ 2.32
ROGDI-201ENST00000322048 SPATA31A6Q5VVP1 1343 aa29.53■■■□□ 2.32
ROGDI-201ENST00000322048 PPM1GO15355 546 aaPredicted RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms