RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 TRIM27P14373 513 aa20.08■□□□□ 0.81
CLIP4-201ENST00000320081 HSP90AA2PQ14568 343 aaPredicted RBP20.08■□□□□ 0.81
CLIP4-201ENST00000320081 CEBPAP49715 358 aaPredicted RBP20.08■□□□□ 0.8
CLIP4-201ENST00000320081 EVA1CP58658 441 aa20.07■□□□□ 0.8
CLIP4-201ENST00000320081 RAPGEF4Q8WZA2 1011 aa20.07■□□□□ 0.8
CLIP4-201ENST00000320081 UPF3BQ9BZI7 483 aaKnown RBP20.07■□□□□ 0.8
CLIP4-201ENST00000320081 TSHZ3Q63HK5 1081 aa20.07■□□□□ 0.8
CLIP4-201ENST00000320081 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
CLIP4-201ENST00000320081 PCDHB15Q9Y5E8 787 aa20.07■□□□□ 0.8
CLIP4-201ENST00000320081 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
CLIP4-201ENST00000320081 FIBPO43427 364 aa20.06■□□□□ 0.8
CLIP4-201ENST00000320081 BICD2Q8TD16 824 aa20.06■□□□□ 0.8
CLIP4-201ENST00000320081 NUDT16Q96DE0 195 aaKnown RBP20.06■□□□□ 0.8
CLIP4-201ENST00000320081 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
CLIP4-201ENST00000320081 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
CLIP4-201ENST00000320081 ZNF592Q92610 1267 aa20.05■□□□□ 0.8
CLIP4-201ENST00000320081 SKOR2Q2VWA4 1001 aaPredicted RBP20.05■□□□□ 0.8
CLIP4-201ENST00000320081 HDAC5Q9UQL6 1122 aa20.05■□□□□ 0.8
CLIP4-201ENST00000320081 SLC52A1Q9NWF4 448 aa20.05■□□□□ 0.8
CLIP4-201ENST00000320081 NASPP49321 788 aaPredicted RBP20.04■□□□□ 0.8
CLIP4-201ENST00000320081 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
CLIP4-201ENST00000320081 CHMP4AQ9BY43 222 aa20.04■□□□□ 0.8
CLIP4-201ENST00000320081 MAP3K1Q13233 1512 aa20.04■□□□□ 0.8
CLIP4-201ENST00000320081 CEBPZQ03701 1054 aaKnown RBP20.03■□□□□ 0.8
CLIP4-201ENST00000320081 TESK2Q96S53 571 aa20.03■□□□□ 0.8
CLIP4-201ENST00000320081 MYL6BP14649 208 aa20.03■□□□□ 0.8
CLIP4-201ENST00000320081 RTEL1-TNFRSF6BF6WH68 1400 aa20.02■□□□□ 0.8
CLIP4-201ENST00000320081 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
CLIP4-201ENST00000320081 ZC3H6P61129 1189 aaKnown RBP20.02■□□□□ 0.8
CLIP4-201ENST00000320081 NUCB2P80303 420 aa20.02■□□□□ 0.8
CLIP4-201ENST00000320081 CLASRPQ8N2M8 674 aaKnown RBP20.02■□□□□ 0.8
CLIP4-201ENST00000320081 CCDC85AQ96PX6 553 aaPredicted RBP20.02■□□□□ 0.8
CLIP4-201ENST00000320081 DNAJC2Q99543 621 aaKnown RBP20.02■□□□□ 0.8
CLIP4-201ENST00000320081 STK11IPQ8N1F8 1099 aa20.02■□□□□ 0.79
CLIP4-201ENST00000320081 BECN2A8MW95 431 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 RLBP1P12271 317 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 ZRANB1Q9UGI0 708 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 MCM4P33991 863 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 RASSF8Q8NHQ8 419 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 TBC1D2Q9BYX2 928 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 STK3Q13188 491 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 RUFY2Q8WXA3 655 aa20.01■□□□□ 0.79
CLIP4-201ENST00000320081 GNAI2P04899 355 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 NFE2L2Q16236 605 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 NUTM1Q86Y26 1132 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 FSD1Q9BTV5 496 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 FCHSD2O94868 740 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 FAM43AQ8N2R8 423 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
CLIP4-201ENST00000320081 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
CLIP4-201ENST00000320081 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
CLIP4-201ENST00000320081 NOS1P29475 1434 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 PHF14O94880 888 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 ANXA1P04083 346 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 GCC1Q96CN9 775 aa19.99■□□□□ 0.79
CLIP4-201ENST00000320081 PES1O00541 588 aaKnown RBP19.98■□□□□ 0.79
CLIP4-201ENST00000320081 GNAI3P08754 354 aa19.98■□□□□ 0.79
CLIP4-201ENST00000320081 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
CLIP4-201ENST00000320081 DDX58O95786 925 aaKnown RBP19.98■□□□□ 0.79
CLIP4-201ENST00000320081 CARD14Q9BXL6 1004 aa19.98■□□□□ 0.79
CLIP4-201ENST00000320081 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
CLIP4-201ENST00000320081 R3HCC1Q9Y3T6 440 aaKnown RBP19.98■□□□□ 0.79
CLIP4-201ENST00000320081 RSPH6AQ9H0K4 717 aa19.97■□□□□ 0.79
CLIP4-201ENST00000320081 SEC24BO95487 1268 aa19.97■□□□□ 0.79
CLIP4-201ENST00000320081 MRE11P49959 708 aa19.97■□□□□ 0.79
CLIP4-201ENST00000320081 PLEKHH1Q9ULM0 1364 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 CWC27Q6UX04 472 aaKnown RBP19.96■□□□□ 0.79
CLIP4-201ENST00000320081 GAS2L2Q8NHY3 880 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 STRN4Q9NRL3 753 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 GOLGA6L19H0YKK7 550 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 CPLX1O14810 134 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 KRT24Q2M2I5 525 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 ATP6V1DQ9Y5K8 247 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 NCKAP5LQ9HCH0 1330 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 ATP2B1P20020 1258 aa19.96■□□□□ 0.79
CLIP4-201ENST00000320081 PER1O15534 1290 aaPredicted RBP19.95■□□□□ 0.78
CLIP4-201ENST00000320081 CLSTN1O94985 981 aa19.95■□□□□ 0.78
CLIP4-201ENST00000320081 PDE4CQ08493 712 aa19.95■□□□□ 0.78
CLIP4-201ENST00000320081 K7ELQ4 463 aaPredicted RBP19.95■□□□□ 0.78
CLIP4-201ENST00000320081 LRPPRCP42704 1394 aaKnown RBP19.95■□□□□ 0.78
CLIP4-201ENST00000320081 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
CLIP4-201ENST00000320081 NUP153P49790 1475 aaKnown RBP19.95■□□□□ 0.78
CLIP4-201ENST00000320081 CHMP4CQ96CF2 233 aa19.94■□□□□ 0.78
CLIP4-201ENST00000320081 CCAR2Q8N163 923 aaKnown RBP19.94■□□□□ 0.78
CLIP4-201ENST00000320081 CSPP1Q1MSJ5 1256 aa19.94■□□□□ 0.78
CLIP4-201ENST00000320081 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
CLIP4-201ENST00000320081 NKTRP30414 1462 aaKnown RBP19.94■□□□□ 0.78
CLIP4-201ENST00000320081 AAMPQ13685 434 aa19.93■□□□□ 0.78
CLIP4-201ENST00000320081 LRRCC1Q9C099 1032 aa19.93■□□□□ 0.78
CLIP4-201ENST00000320081 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
CLIP4-201ENST00000320081 FERMT3Q86UX7 667 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 ATP10BO94823 1461 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 FYB1O15117 783 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 ERC2O15083 957 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 RABEP1Q15276 862 aa19.92■□□□□ 0.78
CLIP4-201ENST00000320081 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms