RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 ZNF530Q6P9A1 599 aaPredicted RBP17.24■□□□□ 0.35
TRIM25-201ENST00000316881 CCDC73Q6ZRK6 1079 aa17.24■□□□□ 0.35
TRIM25-201ENST00000316881 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
TRIM25-201ENST00000316881 CCAR2Q8N163 923 aaKnown RBP17.24■□□□□ 0.35
TRIM25-201ENST00000316881 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
TRIM25-201ENST00000316881 CDCA7LQ96GN5 454 aa17.24■□□□□ 0.35
TRIM25-201ENST00000316881 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
TRIM25-201ENST00000316881 HIP1O00291 1037 aa17.23■□□□□ 0.35
TRIM25-201ENST00000316881 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
TRIM25-201ENST00000316881 SLC26A8Q96RN1 970 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 NESP48681 1621 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 RAPGEF3O95398 923 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 HDGFL1Q5TGJ6 251 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 WWC2Q6AWC2 1192 aa17.22■□□□□ 0.35
TRIM25-201ENST00000316881 RTEL1-TNFRSF6BF6WH68 1400 aa17.21■□□□□ 0.35
TRIM25-201ENST00000316881 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.21■□□□□ 0.35
TRIM25-201ENST00000316881 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
TRIM25-201ENST00000316881 CABP1Q9NZU7 370 aa17.21■□□□□ 0.35
TRIM25-201ENST00000316881 ARID3AQ99856 593 aa17.21■□□□□ 0.35
TRIM25-201ENST00000316881 CT47A1Q5JQC4 288 aaPredicted RBP17.21■□□□□ 0.35
TRIM25-201ENST00000316881 CDC45O75419 566 aa17.21■□□□□ 0.35
TRIM25-201ENST00000316881 TTC39AQ5SRH9 613 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 SULT6B1Q6IMI4 303 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.2■□□□□ 0.34
TRIM25-201ENST00000316881 CC2D2AQ9P2K1 1620 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 TWISTNBQ3B726 338 aaPredicted RBP17.2■□□□□ 0.34
TRIM25-201ENST00000316881 AKNAQ7Z591 1439 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 NUCB2P80303 420 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 PANK1Q8TE04 598 aa17.2■□□□□ 0.34
TRIM25-201ENST00000316881 FOSBP53539 338 aa17.19■□□□□ 0.34
TRIM25-201ENST00000316881 ODF2Q5BJF6 829 aa17.19■□□□□ 0.34
TRIM25-201ENST00000316881 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
TRIM25-201ENST00000316881 C9orf84Q5VXU9 1444 aa17.19■□□□□ 0.34
TRIM25-201ENST00000316881 TMEM132AQ24JP5 1023 aa17.18■□□□□ 0.34
TRIM25-201ENST00000316881 MPHOSPH8Q99549 860 aa17.18■□□□□ 0.34
TRIM25-201ENST00000316881 KIAA1107Q9UPP5 1409 aa17.18■□□□□ 0.34
TRIM25-201ENST00000316881 GNAI2P04899 355 aa17.18■□□□□ 0.34
TRIM25-201ENST00000316881 EPS15P42566 896 aa17.18■□□□□ 0.34
TRIM25-201ENST00000316881 GPS2Q13227 327 aa17.17■□□□□ 0.34
TRIM25-201ENST00000316881 CCDC184Q52MB2 194 aa17.17■□□□□ 0.34
TRIM25-201ENST00000316881 CHMP5Q9NZZ3 219 aa17.17■□□□□ 0.34
TRIM25-201ENST00000316881 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.17■□□□□ 0.34
TRIM25-201ENST00000316881 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
TRIM25-201ENST00000316881 NACAP1Q9BZK3 213 aa17.16■□□□□ 0.34
TRIM25-201ENST00000316881 NBPF1Q3BBV0 1214 aa17.16■□□□□ 0.34
TRIM25-201ENST00000316881 OFD1O75665 1012 aa17.15■□□□□ 0.34
TRIM25-201ENST00000316881 SLC12A5Q9H2X9 1139 aa17.15■□□□□ 0.34
TRIM25-201ENST00000316881 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
TRIM25-201ENST00000316881 CCDC57Q2TAC2 916 aa17.15■□□□□ 0.34
TRIM25-201ENST00000316881 RRP12Q5JTH9 1297 aaKnown RBP17.15■□□□□ 0.34
TRIM25-201ENST00000316881 TROQ12816 1431 aaPredicted RBP17.14■□□□□ 0.34
TRIM25-201ENST00000316881 SLC4A2P04920 1241 aa17.14■□□□□ 0.34
TRIM25-201ENST00000316881 CCT4P50991 539 aaKnown RBP17.14■□□□□ 0.34
TRIM25-201ENST00000316881 OLFM4Q6UX06 510 aa17.14■□□□□ 0.34
TRIM25-201ENST00000316881 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 CDK5RAP3Q96JB5 506 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 RBM5P52756 815 aaKnown RBP eCLIP17.14■□□□□ 0.331e-11■■■■■ 41.3
TRIM25-201ENST00000316881 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
TRIM25-201ENST00000316881 ATAD2Q6PL18 1390 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 ATP2B2Q01814 1243 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
TRIM25-201ENST00000316881 SUPT6HQ7KZ85 1726 aaKnown RBP17.14■□□□□ 0.33
TRIM25-201ENST00000316881 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■■ 60.5
TRIM25-201ENST00000316881 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
TRIM25-201ENST00000316881 C22orf23Q9BZE7 217 aa17.13■□□□□ 0.33
TRIM25-201ENST00000316881 HECW1Q76N89 1606 aa17.13■□□□□ 0.33
TRIM25-201ENST00000316881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■□□□ 13.2
TRIM25-201ENST00000316881 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
TRIM25-201ENST00000316881 NAP1L1P55209 391 aaKnown RBP17.13■□□□□ 0.33
TRIM25-201ENST00000316881 ZSCAN25Q6NSZ9 544 aa17.13■□□□□ 0.33
TRIM25-201ENST00000316881 TXLNAP40222 546 aa17.12■□□□□ 0.33
TRIM25-201ENST00000316881 HOMER1Q86YM7 354 aa17.12■□□□□ 0.33
TRIM25-201ENST00000316881 TOPBP1Q92547 1522 aa17.12■□□□□ 0.33
TRIM25-201ENST00000316881 NAT10Q9H0A0 1025 aaKnown RBP17.12■□□□□ 0.33
TRIM25-201ENST00000316881 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
TRIM25-201ENST00000316881 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
TRIM25-201ENST00000316881 DAPK1P53355 1430 aa17.11■□□□□ 0.33
TRIM25-201ENST00000316881 MYL6BP14649 208 aa17.11■□□□□ 0.33
TRIM25-201ENST00000316881 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
TRIM25-201ENST00000316881 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
TRIM25-201ENST00000316881 STARD3NLO95772 234 aa17.1■□□□□ 0.33
TRIM25-201ENST00000316881 ERBINQ96RT1 1412 aa17.1■□□□□ 0.33
TRIM25-201ENST00000316881 ZC3H6P61129 1189 aaKnown RBP17.1■□□□□ 0.33
TRIM25-201ENST00000316881 NAIPQ13075 1403 aa17.1■□□□□ 0.33
TRIM25-201ENST00000316881 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
TRIM25-201ENST00000316881 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
TRIM25-201ENST00000316881 GCC1Q96CN9 775 aa17.09■□□□□ 0.33
TRIM25-201ENST00000316881 PDCP20941 246 aa17.09■□□□□ 0.33
TRIM25-201ENST00000316881 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
TRIM25-201ENST00000316881 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
TRIM25-201ENST00000316881 KRT18P05783 430 aaKnown RBP17.09■□□□□ 0.33
TRIM25-201ENST00000316881 ATP2B1P20020 1258 aa17.08■□□□□ 0.33
TRIM25-201ENST00000316881 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.32
TRIM25-201ENST00000316881 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
TRIM25-201ENST00000316881 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
TRIM25-201ENST00000316881 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
TRIM25-201ENST00000316881 RDXP35241 583 aaKnown RBP17.07■□□□□ 0.32
TRIM25-201ENST00000316881 IGHMBP2P38935 993 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms