RNA–Protein interactions for RNA: ENST00000316848.9

MINDY2-201, Transcript of MINDY lysine 48 deubiquitinase 2, humanhuman

TSL 1 (best)

Gene MINDY2, Length 4,866 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY2-201ENST00000316848 CABP1Q9NZU7 370 aa21.68■■□□□ 1.06
MINDY2-201ENST00000316848 NEK4P51957 841 aa21.67■■□□□ 1.06
MINDY2-201ENST00000316848 RABEP1Q15276 862 aa21.67■■□□□ 1.06
MINDY2-201ENST00000316848 NAT10Q9H0A0 1025 aaKnown RBP21.67■■□□□ 1.06
MINDY2-201ENST00000316848 MBD3O95983 291 aa21.66■■□□□ 1.06
MINDY2-201ENST00000316848 RPGRIP1LQ68CZ1 1315 aa21.66■■□□□ 1.06
MINDY2-201ENST00000316848 SLC4A2P04920 1241 aa21.66■■□□□ 1.06
MINDY2-201ENST00000316848 CCT4P50991 539 aaKnown RBP21.66■■□□□ 1.06
MINDY2-201ENST00000316848 FOSBP53539 338 aa21.66■■□□□ 1.06
MINDY2-201ENST00000316848 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
MINDY2-201ENST00000316848 MRE11P49959 708 aa21.65■■□□□ 1.06
MINDY2-201ENST00000316848 KIF6Q6ZMV9 814 aa21.64■■□□□ 1.06
MINDY2-201ENST00000316848 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.06
MINDY2-201ENST00000316848 IFT140Q96RY7 1462 aa21.64■■□□□ 1.06
MINDY2-201ENST00000316848 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.05
MINDY2-201ENST00000316848 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.64■■□□□ 1.05
MINDY2-201ENST00000316848 NOB1Q9ULX3 412 aaKnown RBP21.64■■□□□ 1.05
MINDY2-201ENST00000316848 OLFM4Q6UX06 510 aa21.63■■□□□ 1.05
MINDY2-201ENST00000316848 FYB1O15117 783 aa21.62■■□□□ 1.05
MINDY2-201ENST00000316848 FAM43AQ8N2R8 423 aa21.62■■□□□ 1.05
MINDY2-201ENST00000316848 DNAJC2Q99543 621 aaKnown RBP21.62■■□□□ 1.05
MINDY2-201ENST00000316848 ATF7IPQ6VMQ6 1270 aa21.62■■□□□ 1.05
MINDY2-201ENST00000316848 SRCIN1Q9C0H9 1055 aa21.61■■□□□ 1.05
MINDY2-201ENST00000316848 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
MINDY2-201ENST00000316848 MRC2Q9UBG0 1479 aa21.61■■□□□ 1.05
MINDY2-201ENST00000316848 BCAR3O75815 825 aa21.61■■□□□ 1.05
MINDY2-201ENST00000316848 ZNF530Q6P9A1 599 aaPredicted RBP21.61■■□□□ 1.05
MINDY2-201ENST00000316848 ZNF428Q96B54 188 aa21.61■■□□□ 1.05
MINDY2-201ENST00000316848 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
MINDY2-201ENST00000316848 IFT57Q9NWB7 429 aa21.6■■□□□ 1.05
MINDY2-201ENST00000316848 RTEL1-TNFRSF6BF6WH68 1400 aa21.6■■□□□ 1.05
MINDY2-201ENST00000316848 LETM1O95202 739 aaPredicted RBP21.6■■□□□ 1.05
MINDY2-201ENST00000316848 SYNJ1O43426 1573 aa21.6■■□□□ 1.05
MINDY2-201ENST00000316848 C1orf115Q9H7X2 142 aa21.6■■□□□ 1.05
MINDY2-201ENST00000316848 NASPP49321 788 aaPredicted RBP21.59■■□□□ 1.05
MINDY2-201ENST00000316848 ERBINQ96RT1 1412 aa21.59■■□□□ 1.05
MINDY2-201ENST00000316848 CCDC158Q5M9N0 1113 aa21.59■■□□□ 1.05
MINDY2-201ENST00000316848 KINO60870 393 aaKnown RBP21.58■■□□□ 1.05
MINDY2-201ENST00000316848 TRAK2O60296 914 aa21.58■■□□□ 1.05
MINDY2-201ENST00000316848 SLC3A2P08195 630 aaKnown RBP21.57■■□□□ 1.04
MINDY2-201ENST00000316848 LRRCC1Q9C099 1032 aa21.57■■□□□ 1.04
MINDY2-201ENST00000316848 MNS1Q8NEH6 495 aa21.57■■□□□ 1.04
MINDY2-201ENST00000316848 FAM177BA6PVY3 158 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 FCHSD2O94868 740 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 STRN4Q9NRL3 753 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 CNNM1Q9NRU3 951 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 SPG7Q9UQ90 795 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 OFD1O75665 1012 aa21.56■■□□□ 1.04
MINDY2-201ENST00000316848 MVPQ14764 893 aaKnown RBP21.56■■□□□ 1.04
MINDY2-201ENST00000316848 GNL3LQ9NVN8 582 aaKnown RBP21.56■■□□□ 1.04
MINDY2-201ENST00000316848 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
MINDY2-201ENST00000316848 CABP4P57796 275 aa21.55■■□□□ 1.04
MINDY2-201ENST00000316848 SAMD1Q6SPF0 538 aaPredicted RBP21.55■■□□□ 1.04
MINDY2-201ENST00000316848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.55■■□□□ 1.04
MINDY2-201ENST00000316848 ARGLU1Q9NWB6 273 aaPredicted RBP21.55■■□□□ 1.04
MINDY2-201ENST00000316848 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.55■■□□□ 1.042e-6■■■■□ 23.8
MINDY2-201ENST00000316848 CCDC39Q9UFE4 941 aa21.55■■□□□ 1.04
MINDY2-201ENST00000316848 DAPK1P53355 1430 aa21.55■■□□□ 1.04
MINDY2-201ENST00000316848 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
MINDY2-201ENST00000316848 RNF214Q8ND24 703 aa21.54■■□□□ 1.04
MINDY2-201ENST00000316848 TEX35Q5T0J7 233 aa21.54■■□□□ 1.04
MINDY2-201ENST00000316848 SETQ01105 290 aaPredicted RBP21.54■■□□□ 1.04
MINDY2-201ENST00000316848 CWC22Q9HCG8 908 aaKnown RBP21.54■■□□□ 1.04
MINDY2-201ENST00000316848 CYP46A1Q9Y6A2 500 aa21.54■■□□□ 1.04
MINDY2-201ENST00000316848 CAVIN1Q6NZI2 390 aaKnown RBP21.53■■□□□ 1.04
MINDY2-201ENST00000316848 ANKLE2Q86XL3 938 aa21.53■■□□□ 1.04
MINDY2-201ENST00000316848 ZNF396Q96N95 335 aaPredicted RBP21.53■■□□□ 1.04
MINDY2-201ENST00000316848 POLA1P09884 1462 aaPredicted RBP21.53■■□□□ 1.04
MINDY2-201ENST00000316848 ANKRD1Q15327 319 aa21.53■■□□□ 1.04
MINDY2-201ENST00000316848 FAM13BQ9NYF5 915 aa21.53■■□□□ 1.04
MINDY2-201ENST00000316848 NAP1L1P55209 391 aaKnown RBP21.53■■□□□ 1.04
MINDY2-201ENST00000316848 TOM1L2Q6ZVM7 507 aa21.53■■□□□ 1.04
MINDY2-201ENST00000316848 RAPGEF3O95398 923 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 HECW1Q76N89 1606 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 IKQ13123 557 aaPredicted RBP21.52■■□□□ 1.04
MINDY2-201ENST00000316848 SLC26A8Q96RN1 970 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 ATP2B1P20020 1258 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 TTC39AQ5SRH9 613 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 CCDC61Q9Y6R9 512 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 NESP48681 1621 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 JMYQ8N9B5 988 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 TRIM5Q9C035 493 aa21.52■■□□□ 1.04
MINDY2-201ENST00000316848 CT47A1Q5JQC4 288 aaPredicted RBP21.51■■□□□ 1.03
MINDY2-201ENST00000316848 MTMR7Q9Y216 660 aa21.51■■□□□ 1.03
MINDY2-201ENST00000316848 TXLNAP40222 546 aa21.51■■□□□ 1.03
MINDY2-201ENST00000316848 ACBD3Q9H3P7 528 aa21.51■■□□□ 1.03
MINDY2-201ENST00000316848 TIAM1Q13009 1591 aa21.51■■□□□ 1.03
MINDY2-201ENST00000316848 R3HCC1Q9Y3T6 440 aaKnown RBP21.51■■□□□ 1.03
MINDY2-201ENST00000316848 PRPF40AO75400 957 aaKnown RBP21.5■■□□□ 1.03
MINDY2-201ENST00000316848 STK38Q15208 465 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 NACAP1Q9BZK3 213 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 EPS15P42566 896 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 CDR1P51861 262 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 AKNAQ7Z591 1439 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 FIBPO43427 364 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 RRP12Q5JTH9 1297 aaKnown RBP21.5■■□□□ 1.03
MINDY2-201ENST00000316848 RPAP2Q8IXW5 612 aaPredicted RBP21.5■■□□□ 1.03
MINDY2-201ENST00000316848 BACH2Q9BYV9 841 aa21.5■■□□□ 1.03
MINDY2-201ENST00000316848 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
MINDY2-201ENST00000316848 AEBP1Q8IUX7 1158 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 454 ms