RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 ATP7BP35670 1465 aa25.41■■□□□ 1.66
EXOSC4-201ENST00000316052 NBPF1Q3BBV0 1214 aa25.41■■□□□ 1.66
EXOSC4-201ENST00000316052 NRAPQ86VF7 1730 aa25.4■■□□□ 1.66
EXOSC4-201ENST00000316052 BLMP54132 1417 aaPredicted RBP25.4■■□□□ 1.66
EXOSC4-201ENST00000316052 KRT27Q7Z3Y8 459 aa25.39■■□□□ 1.66
EXOSC4-201ENST00000316052 CRYBG1Q9Y4K1 1723 aa25.38■■□□□ 1.65
EXOSC4-201ENST00000316052 DEFB132Q7Z7B7 95 aa25.38■■□□□ 1.65
EXOSC4-201ENST00000316052 COL14A1Q05707 1796 aaKnown RBP25.38■■□□□ 1.65
EXOSC4-201ENST00000316052 FAM98CQ17RN3 349 aaKnown RBP25.37■■□□□ 1.65
EXOSC4-201ENST00000316052 ITSN1Q15811 1721 aa25.37■■□□□ 1.65
EXOSC4-201ENST00000316052 KIAA1210Q9ULL0 1709 aa25.37■■□□□ 1.65
EXOSC4-201ENST00000316052 A0A0G2JS52 829 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 MYT1Q01538 1121 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 NBPF8Q3BBV2 869 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 NUTM2GQ5VZR2 741 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 PRDM11Q9NQV5 511 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 CCDC61Q9Y6R9 512 aa25.33■■□□□ 1.65
EXOSC4-201ENST00000316052 ACEP12821 1306 aa25.33■■□□□ 1.64
EXOSC4-201ENST00000316052 SPATA31A5Q5VU36 1347 aa25.33■■□□□ 1.64
EXOSC4-201ENST00000316052 SPATA31A7Q8IWB4 1347 aa25.33■■□□□ 1.64
EXOSC4-201ENST00000316052 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
EXOSC4-201ENST00000316052 PLEKHG3A1L390 1219 aa25.31■■□□□ 1.64
EXOSC4-201ENST00000316052 KIAA0232Q92628 1395 aa25.31■■□□□ 1.64
EXOSC4-201ENST00000316052 SF3B2Q13435 895 aaKnown RBP25.3■■□□□ 1.64
EXOSC4-201ENST00000316052 CHRNA2Q15822 529 aa25.3■■□□□ 1.64
EXOSC4-201ENST00000316052 TOPAZ1Q8N9V7 1692 aa25.29■■□□□ 1.64
EXOSC4-201ENST00000316052 ZC3H6P61129 1189 aaKnown RBP25.28■■□□□ 1.64
EXOSC4-201ENST00000316052 FAM182BQ5T319 152 aa25.27■■□□□ 1.64
EXOSC4-201ENST00000316052 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
EXOSC4-201ENST00000316052 CENPJQ9HC77 1338 aaPredicted RBP25.24■■□□□ 1.63
EXOSC4-201ENST00000316052 L3MBTL2Q969R5 705 aa25.24■■□□□ 1.63
EXOSC4-201ENST00000316052 CABP2Q9NPB3 220 aa25.24■■□□□ 1.63
EXOSC4-201ENST00000316052 SPATA31A1Q5TZJ5 1347 aa25.23■■□□□ 1.63
EXOSC4-201ENST00000316052 SRPK2P78362 688 aaKnown RBP25.23■■□□□ 1.63
EXOSC4-201ENST00000316052 ABTB2Q8N961 1025 aa25.23■■□□□ 1.63
EXOSC4-201ENST00000316052 STRN4Q9NRL3 753 aa25.23■■□□□ 1.63
EXOSC4-201ENST00000316052 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
EXOSC4-201ENST00000316052 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
EXOSC4-201ENST00000316052 PPIP5K1Q6PFW1 1433 aa25.2■■□□□ 1.63
EXOSC4-201ENST00000316052 BAG6P46379 1132 aa25.18■■□□□ 1.62
EXOSC4-201ENST00000316052 USP19O94966 1318 aa25.17■■□□□ 1.62
EXOSC4-201ENST00000316052 QRICH2Q9H0J4 1663 aa25.17■■□□□ 1.62
EXOSC4-201ENST00000316052 EVA1CP58658 441 aa25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 EN1Q05925 392 aaPredicted RBP25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 NRKQ7Z2Y5 1582 aa25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 USP35Q9P2H5 1018 aa25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 CAMTA1Q9Y6Y1 1673 aa25.16■■□□□ 1.62
EXOSC4-201ENST00000316052 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
EXOSC4-201ENST00000316052 SSH2Q76I76 1423 aa25.14■■□□□ 1.62
EXOSC4-201ENST00000316052 GCP02774 474 aa25.14■■□□□ 1.62
EXOSC4-201ENST00000316052 LARP1Q6PKG0 1096 aaKnown RBP25.14■■□□□ 1.62
EXOSC4-201ENST00000316052 CPDO75976 1380 aa25.14■■□□□ 1.61
EXOSC4-201ENST00000316052 NEUROD1Q13562 356 aa25.13■■□□□ 1.61
EXOSC4-201ENST00000316052 RGPD1P0DJD0 1748 aa25.12■■□□□ 1.61
EXOSC4-201ENST00000316052 PSDA5PKW4 1024 aaPredicted RBP25.12■■□□□ 1.61
EXOSC4-201ENST00000316052 LMO7Q8WWI1 1683 aa25.11■■□□□ 1.61
EXOSC4-201ENST00000316052 BARGINQ6ZT62 677 aa25.11■■□□□ 1.61
EXOSC4-201ENST00000316052 BRD4O60885 1362 aaPredicted RBP25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 TRIM37O94972 964 aa25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 FAM196AQ6ZSG2 479 aa25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 USP6P35125 1406 aa25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 TNS1Q9HBL0 1735 aaKnown RBP25.09■■□□□ 1.61
EXOSC4-201ENST00000316052 NLRP6P59044 892 aa25.08■■□□□ 1.61
EXOSC4-201ENST00000316052 TCP11L2Q8N4U5 519 aa25.07■■□□□ 1.6
EXOSC4-201ENST00000316052 EVC2Q86UK5 1308 aa25.07■■□□□ 1.6
EXOSC4-201ENST00000316052 DISP2A7MBM2 1401 aa25.06■■□□□ 1.6
EXOSC4-201ENST00000316052 EZH2Q15910 746 aaKnown RBP25.06■■□□□ 1.6
EXOSC4-201ENST00000316052 ROCK2O75116 1388 aaKnown RBP25.05■■□□□ 1.6
EXOSC4-201ENST00000316052 PDE3BQ13370 1112 aa25.04■■□□□ 1.6
EXOSC4-201ENST00000316052 CAMKK2Q96RR4 588 aa25.04■■□□□ 1.6
EXOSC4-201ENST00000316052 COL5A2P05997 1499 aaPredicted RBP25.03■■□□□ 1.6
EXOSC4-201ENST00000316052 ZBTB7CA1YPR0 619 aa25.03■■□□□ 1.6
EXOSC4-201ENST00000316052 THRAP3Q9Y2W1 955 aaKnown RBP25.02■■□□□ 1.6
EXOSC4-201ENST00000316052 APBA3O96018 575 aa25.01■■□□□ 1.59
EXOSC4-201ENST00000316052 R3HDM1Q15032 1099 aaKnown RBP25.01■■□□□ 1.59
EXOSC4-201ENST00000316052 SLIT3O75094 1523 aa25.01■■□□□ 1.59
EXOSC4-201ENST00000316052 AATKQ6ZMQ8 1374 aa25■■□□□ 1.59
EXOSC4-201ENST00000316052 LRP5O75197 1615 aa25■■□□□ 1.59
EXOSC4-201ENST00000316052 PIK3C2AO00443 1686 aa25■■□□□ 1.59
EXOSC4-201ENST00000316052 TTC21BQ7Z4L5 1316 aa24.98■■□□□ 1.59
EXOSC4-201ENST00000316052 ZNF692Q9BU19 519 aaPredicted RBP24.98■■□□□ 1.59
EXOSC4-201ENST00000316052 AXIN2Q9Y2T1 843 aa24.98■■□□□ 1.59
EXOSC4-201ENST00000316052 COL18A1P39060 1754 aa24.98■■□□□ 1.59
EXOSC4-201ENST00000316052 CRB1P82279 1406 aa24.97■■□□□ 1.59
EXOSC4-201ENST00000316052 AKAP12Q02952 1782 aa24.95■■□□□ 1.59
EXOSC4-201ENST00000316052 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
EXOSC4-201ENST00000316052 ARHGEF25Q86VW2 580 aa24.93■■□□□ 1.58
EXOSC4-201ENST00000316052 CPSF1Q10570 1443 aaKnown RBP24.93■■□□□ 1.58
EXOSC4-201ENST00000316052 TOM1L2Q6ZVM7 507 aa24.92■■□□□ 1.58
EXOSC4-201ENST00000316052 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
EXOSC4-201ENST00000316052 SOX12O15370 315 aa24.91■■□□□ 1.58
EXOSC4-201ENST00000316052 RGPD5Q99666 1765 aa24.9■■□□□ 1.58
EXOSC4-201ENST00000316052 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
EXOSC4-201ENST00000316052 KCNH5Q8NCM2 988 aa24.9■■□□□ 1.58
EXOSC4-201ENST00000316052 KTN1Q86UP2 1357 aaKnown RBP24.9■■□□□ 1.58
EXOSC4-201ENST00000316052 WDR17Q8IZU2 1322 aa24.89■■□□□ 1.58
EXOSC4-201ENST00000316052 CARD11Q9BXL7 1154 aa24.88■■□□□ 1.57
EXOSC4-201ENST00000316052 RREB1Q92766 1687 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms