RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ZBBXA8MT70 800 aa7.08□□□□□ -1.28
SMCO3-201ENST00000316048 JUNDP17535 347 aa7.08□□□□□ -1.28
SMCO3-201ENST00000316048 SOX11P35716 441 aa7.08□□□□□ -1.28
SMCO3-201ENST00000316048 PRR14Q9BWN1 585 aa7.08□□□□□ -1.28
SMCO3-201ENST00000316048 TSR3Q9UJK0 312 aaKnown RBP7.08□□□□□ -1.28
SMCO3-201ENST00000316048 TLL1O43897 1013 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 FMNL1O95466 1100 aaPredicted RBP7.07□□□□□ -1.28
SMCO3-201ENST00000316048 CSB-PGBD3P0DP91 1061 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 CTHP32929 405 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 COPS2P61201 443 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
SMCO3-201ENST00000316048 FAM160A2Q8N612 972 aaPredicted RBP7.07□□□□□ -1.28
SMCO3-201ENST00000316048 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
SMCO3-201ENST00000316048 TMEM88BA6NKF7 163 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 ATP9BO43861 1147 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 PTPRNQ16849 979 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 FAM174AQ8TBP5 190 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 OCSTAMPQ9BR26 566 aa7.07□□□□□ -1.28
SMCO3-201ENST00000316048 NR1I2O75469 434 aa7.06□□□□□ -1.28
SMCO3-201ENST00000316048 DEPDC4Q8N2C3 294 aa7.06□□□□□ -1.28
SMCO3-201ENST00000316048 USTQ9Y2C2 406 aa7.06□□□□□ -1.28
SMCO3-201ENST00000316048 PNMA1Q8ND90 353 aa7.05□□□□□ -1.28
SMCO3-201ENST00000316048 KANK4Q5T7N3 995 aaPredicted RBP7.04□□□□□ -1.28
SMCO3-201ENST00000316048 STAC3Q96MF2 364 aa7.04□□□□□ -1.28
SMCO3-201ENST00000316048 ATG7O95352 703 aa7.04□□□□□ -1.28
SMCO3-201ENST00000316048 SPSB2Q99619 263 aa7.04□□□□□ -1.28
SMCO3-201ENST00000316048 NUDT12Q9BQG2 462 aa7.04□□□□□ -1.28
SMCO3-201ENST00000316048 ZMIZ1Q9ULJ6 1067 aa7.04□□□□□ -1.28
SMCO3-201ENST00000316048 USP17L3A6NCW0 530 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 USP17L4A6NCW7 530 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 DXOO77932 396 aaKnown RBP7.03□□□□□ -1.28
SMCO3-201ENST00000316048 CCNYL3P0C7X3 344 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 USP17L2Q6R6M4 530 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 USP17L1Q7RTZ2 530 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 STK32AQ8WU08 396 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 SKIP12755 728 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 MSS51Q4VC12 460 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 TMCO4Q5TGY1 634 aa7.03□□□□□ -1.28
SMCO3-201ENST00000316048 USP17L5A8MUK1 530 aa7.02□□□□□ -1.29
SMCO3-201ENST00000316048 BRD1O95696 1058 aa7.02□□□□□ -1.29
SMCO3-201ENST00000316048 EVA1BQ9NVM1 165 aa7.02□□□□□ -1.29
SMCO3-201ENST00000316048 RANGAP1P46060 587 aaPredicted RBP7.01□□□□□ -1.29
SMCO3-201ENST00000316048 MMP16P51512 607 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 MFAP1P55081 439 aaKnown RBP7.01□□□□□ -1.29
SMCO3-201ENST00000316048 KCNH2Q12809 1159 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 TMEM164Q5U3C3 297 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 PTCRAQ6ISU1 281 aaPredicted RBP7.01□□□□□ -1.29
SMCO3-201ENST00000316048 THSD4Q6ZMP0 1018 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 MTMR7Q9Y216 660 aa7.01□□□□□ -1.29
SMCO3-201ENST00000316048 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
SMCO3-201ENST00000316048 RGS22Q8NE09 1264 aa7□□□□□ -1.29
SMCO3-201ENST00000316048 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
SMCO3-201ENST00000316048 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
SMCO3-201ENST00000316048 PCDHB9Q9Y5E1 797 aa7□□□□□ -1.29
SMCO3-201ENST00000316048 ZC3H4Q9UPT8 1303 aaKnown RBP7□□□□□ -1.29
SMCO3-201ENST00000316048 KCTD12Q96CX2 325 aaKnown RBP7□□□□□ -1.29
SMCO3-201ENST00000316048 IVNS1ABPQ9Y6Y0 642 aa7□□□□□ -1.29
SMCO3-201ENST00000316048 KCNA1Q09470 495 aa6.99□□□□□ -1.29
SMCO3-201ENST00000316048 NCOA4Q13772 614 aa6.99□□□□□ -1.29
SMCO3-201ENST00000316048 TSGA10IPQ3SY00 556 aa6.99□□□□□ -1.29
SMCO3-201ENST00000316048 ADAM32Q8TC27 787 aa6.99□□□□□ -1.29
SMCO3-201ENST00000316048 POTEMA6NI47 508 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 PDE4CQ08493 712 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 FOXD4L5Q5VV16 416 aaPredicted RBP6.98□□□□□ -1.29
SMCO3-201ENST00000316048 FOXD4L4Q8WXT5 416 aaPredicted RBP6.98□□□□□ -1.29
SMCO3-201ENST00000316048 SLAIN2Q9P270 581 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 CEP126Q9P2H0 1117 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 NOVA2Q9UNW9 492 aaKnown RBP6.98□□□□□ -1.29
SMCO3-201ENST00000316048 PDXDC2PQ6P474 469 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 CCDC24Q8N4L8 307 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 ZNF516Q92618 1163 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 MTRQ99707 1265 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
SMCO3-201ENST00000316048 ZPR1O75312 459 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 NFATC2IPQ8NCF5 419 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 ZNF428Q96B54 188 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 MKRN1Q9UHC7 482 aaKnown RBP6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L21D6R901 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 ADH1BP00325 375 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 PTK2Q05397 1052 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 PLEKHM2Q8IWE5 1019 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 PHTF2Q8N3S3 785 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 PLPP7Q8NBV4 271 aa6.97□□□□□ -1.29
SMCO3-201ENST00000316048 SLFNL1Q499Z3 407 aa6.96□□□□□ -1.3
SMCO3-201ENST00000316048 NBPF14Q5TI25 921 aa6.96□□□□□ -1.3
SMCO3-201ENST00000316048 RNF135Q8IUD6 432 aa6.96□□□□□ -1.3
SMCO3-201ENST00000316048 ARHGAP9Q9BRR9 750 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms