RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
CHFR-202ENST00000315585 ADAMTSL3P82987 1691 aa19.31■□□□□ 0.68
CHFR-202ENST00000315585 ANKRD26Q9UPS8 1709 aa19.3■□□□□ 0.68
CHFR-202ENST00000315585 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
CHFR-202ENST00000315585 ADGRB2O60241 1585 aa19.29■□□□□ 0.68
CHFR-202ENST00000315585 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
CHFR-202ENST00000315585 TNNT2P45379 298 aaPredicted RBP19.29■□□□□ 0.68
CHFR-202ENST00000315585 MTHFSP49914 203 aa19.29■□□□□ 0.68
CHFR-202ENST00000315585 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
CHFR-202ENST00000315585 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
CHFR-202ENST00000315585 SLC26A8Q96RN1 970 aa19.27■□□□□ 0.68
CHFR-202ENST00000315585 NUDT16Q96DE0 195 aaKnown RBP19.27■□□□□ 0.68
CHFR-202ENST00000315585 FYB1O15117 783 aa19.26■□□□□ 0.67
CHFR-202ENST00000315585 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
CHFR-202ENST00000315585 PIK3R4Q99570 1358 aa19.26■□□□□ 0.67
CHFR-202ENST00000315585 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
CHFR-202ENST00000315585 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
CHFR-202ENST00000315585 KIF20BQ96Q89 1820 aa19.26■□□□□ 0.67
CHFR-202ENST00000315585 ZNF142P52746 1687 aaPredicted RBP19.26■□□□□ 0.67
CHFR-202ENST00000315585 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
CHFR-202ENST00000315585 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
CHFR-202ENST00000315585 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
CHFR-202ENST00000315585 ZNF692Q9BU19 519 aaPredicted RBP19.25■□□□□ 0.67
CHFR-202ENST00000315585 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
CHFR-202ENST00000315585 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
CHFR-202ENST00000315585 AMOTL2Q9Y2J4 779 aa19.25■□□□□ 0.67
CHFR-202ENST00000315585 MYH16Q9H6N6 1097 aa19.24■□□□□ 0.67
CHFR-202ENST00000315585 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
CHFR-202ENST00000315585 CDC42BPGQ6DT37 1551 aa19.24■□□□□ 0.67
CHFR-202ENST00000315585 PAK3O75914 559 aaPredicted RBP19.23■□□□□ 0.67
CHFR-202ENST00000315585 ANKLE2Q86XL3 938 aa19.23■□□□□ 0.67
CHFR-202ENST00000315585 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
CHFR-202ENST00000315585 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
CHFR-202ENST00000315585 SETD1BQ9UPS6 1966 aaKnown RBP19.23■□□□□ 0.67
CHFR-202ENST00000315585 NPM2Q86SE8 214 aaKnown RBP19.23■□□□□ 0.67
CHFR-202ENST00000315585 BCAR3O75815 825 aa19.22■□□□□ 0.67
CHFR-202ENST00000315585 CT47B1P0C2W7 299 aaPredicted RBP19.22■□□□□ 0.67
CHFR-202ENST00000315585 FAM161AQ3B820 660 aa19.22■□□□□ 0.67
CHFR-202ENST00000315585 IQSEC2Q5JU85 1478 aa19.22■□□□□ 0.67
CHFR-202ENST00000315585 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
CHFR-202ENST00000315585 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.21■□□□□ 0.67
CHFR-202ENST00000315585 U2AF1L5P0DN76 240 aaPredicted RBP19.2■□□□□ 0.66
CHFR-202ENST00000315585 U2AF1Q01081 240 aaKnown RBP eCLIP19.2■□□□□ 0.66
CHFR-202ENST00000315585 ITSN1Q15811 1721 aa19.19■□□□□ 0.66
CHFR-202ENST00000315585 MON2Q7Z3U7 1717 aa19.18■□□□□ 0.66
CHFR-202ENST00000315585 XRN1Q8IZH2 1706 aaKnown RBP19.18■□□□□ 0.66
CHFR-202ENST00000315585 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
CHFR-202ENST00000315585 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.18■□□□□ 0.66
CHFR-202ENST00000315585 AKAP12Q02952 1782 aa19.17■□□□□ 0.66
CHFR-202ENST00000315585 CLUAP1Q96AJ1 413 aa19.17■□□□□ 0.66
CHFR-202ENST00000315585 RARSP54136 660 aaKnown RBP19.16■□□□□ 0.66
CHFR-202ENST00000315585 PMFBP1Q8TBY8 1022 aa19.16■□□□□ 0.66
CHFR-202ENST00000315585 MAPK8IP3Q9UPT6 1336 aa19.16■□□□□ 0.66
CHFR-202ENST00000315585 PLEKHG3A1L390 1219 aa19.16■□□□□ 0.66
CHFR-202ENST00000315585 PPM1GO15355 546 aaPredicted RBP19.16■□□□□ 0.66
CHFR-202ENST00000315585 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
CHFR-202ENST00000315585 PRR36Q9H6K5 1346 aa19.15■□□□□ 0.66
CHFR-202ENST00000315585 TOPAZ1Q8N9V7 1692 aa19.15■□□□□ 0.66
CHFR-202ENST00000315585 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
CHFR-202ENST00000315585 DAXXQ9UER7 740 aaPredicted RBP19.15■□□□□ 0.66
CHFR-202ENST00000315585 COG3Q96JB2 828 aa19.13■□□□□ 0.65
CHFR-202ENST00000315585 RRP7AQ9Y3A4 280 aaKnown RBP19.13■□□□□ 0.65
CHFR-202ENST00000315585 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
CHFR-202ENST00000315585 AATKQ6ZMQ8 1374 aa19.12■□□□□ 0.65
CHFR-202ENST00000315585 DIAPH1O60610 1272 aaKnown RBP19.12■□□□□ 0.65
CHFR-202ENST00000315585 NBR1Q14596 966 aa19.12■□□□□ 0.65
CHFR-202ENST00000315585 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
CHFR-202ENST00000315585 COL3A1P02461 1466 aaPredicted RBP19.12■□□□□ 0.65
CHFR-202ENST00000315585 IL16Q14005 1332 aa19.11■□□□□ 0.65
CHFR-202ENST00000315585 ANKARQ7Z5J8 1434 aa19.1■□□□□ 0.65
CHFR-202ENST00000315585 ACEP12821 1306 aa19.1■□□□□ 0.65
CHFR-202ENST00000315585 NEFMP07197 916 aa19.1■□□□□ 0.65
CHFR-202ENST00000315585 COG6Q9Y2V7 657 aa19.1■□□□□ 0.65
CHFR-202ENST00000315585 NCKAP5LQ9HCH0 1330 aa19.09■□□□□ 0.65
CHFR-202ENST00000315585 KCNA6P17658 529 aa19.09■□□□□ 0.65
CHFR-202ENST00000315585 NME9Q86XW9 330 aa19.09■□□□□ 0.65
CHFR-202ENST00000315585 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
CHFR-202ENST00000315585 CHD2O14647 1828 aaKnown RBP19.08■□□□□ 0.65
CHFR-202ENST00000315585 RGS3P49796 1198 aa19.08■□□□□ 0.64
CHFR-202ENST00000315585 C8orf34Q49A92 452 aa19.08■□□□□ 0.64
CHFR-202ENST00000315585 USP6P35125 1406 aa19.08■□□□□ 0.64
CHFR-202ENST00000315585 PANK1Q8TE04 598 aa19.08■□□□□ 0.64
CHFR-202ENST00000315585 POLKQ9UBT6 870 aa19.08■□□□□ 0.64
CHFR-202ENST00000315585 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
CHFR-202ENST00000315585 RWDD1Q9H446 243 aaPredicted RBP19.07■□□□□ 0.64
CHFR-202ENST00000315585 TTC21BQ7Z4L5 1316 aa19.07■□□□□ 0.64
CHFR-202ENST00000315585 NPHP4O75161 1426 aaPredicted RBP19.07■□□□□ 0.64
CHFR-202ENST00000315585 TMPOP42166 694 aaKnown RBP19.06■□□□□ 0.64
CHFR-202ENST00000315585 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
CHFR-202ENST00000315585 NRKQ7Z2Y5 1582 aa19.06■□□□□ 0.64
CHFR-202ENST00000315585 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
CHFR-202ENST00000315585 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
CHFR-202ENST00000315585 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
CHFR-202ENST00000315585 IGHDP01880 384 aa19.05■□□□□ 0.64
CHFR-202ENST00000315585 FCHSD2O94868 740 aa19.04■□□□□ 0.64
CHFR-202ENST00000315585 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
CHFR-202ENST00000315585 DEKP35659 375 aaKnown RBP19.04■□□□□ 0.64
CHFR-202ENST00000315585 FTSJ3Q8IY81 847 aaKnown RBP19.04■□□□□ 0.64
CHFR-202ENST00000315585 SKAP1Q86WV1 359 aa19.03■□□□□ 0.64
CHFR-202ENST00000315585 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms