RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 WASLO00401 505 aaPredicted RBP11.12□□□□□ -0.63
CDC42-201ENST00000315554 ESCO1Q5FWF5 840 aa11.12□□□□□ -0.63
CDC42-201ENST00000315554 FMN2Q9NZ56 1722 aa11.11□□□□□ -0.63
CDC42-201ENST00000315554 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
CDC42-201ENST00000315554 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
CDC42-201ENST00000315554 PRR36Q9H6K5 1346 aa11.1□□□□□ -0.63
CDC42-201ENST00000315554 USP47Q96K76 1375 aa11.1□□□□□ -0.63
CDC42-201ENST00000315554 ST20-MTHFSA0A0A6YYL1 179 aa11.1□□□□□ -0.63
CDC42-201ENST00000315554 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
CDC42-201ENST00000315554 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
CDC42-201ENST00000315554 XPCQ01831 940 aaPredicted RBP11.09□□□□□ -0.63
CDC42-201ENST00000315554 TULP4Q9NRJ4 1543 aa11.09□□□□□ -0.63
CDC42-201ENST00000315554 USP32Q8NFA0 1604 aa11.08□□□□□ -0.64
CDC42-201ENST00000315554 PMFBP1Q8TBY8 1022 aa11.08□□□□□ -0.64
CDC42-201ENST00000315554 NUDT16Q96DE0 195 aaKnown RBP11.07□□□□□ -0.64
CDC42-201ENST00000315554 RGPD8O14715 1765 aaPredicted RBP11.07□□□□□ -0.64
CDC42-201ENST00000315554 FOXO3O43524 673 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 EVC2Q86UK5 1308 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 ANKARQ7Z5J8 1434 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 ATP7BP35670 1465 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
CDC42-201ENST00000315554 TESK2Q96S53 571 aa11.06□□□□□ -0.64
CDC42-201ENST00000315554 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
CDC42-201ENST00000315554 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
CDC42-201ENST00000315554 DISP3Q9P2K9 1392 aa11.04□□□□□ -0.64
CDC42-201ENST00000315554 COL16A1Q07092 1604 aaPredicted RBP11.03□□□□□ -0.64
CDC42-201ENST00000315554 NHSL1Q5SYE7 1610 aa11.03□□□□□ -0.64
CDC42-201ENST00000315554 EIF4G2P78344 907 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDC42-201ENST00000315554 NGDNQ8NEJ9 315 aaKnown RBP11.03□□□□□ -0.64
CDC42-201ENST00000315554 PLEKHG5O94827 1062 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 PPIP5K1Q6PFW1 1433 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 KRT28Q7Z3Y7 464 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 NPHP3Q7Z494 1330 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 CABP1Q9NZU7 370 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 SBNO2Q9Y2G9 1366 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.65
CDC42-201ENST00000315554 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 PXDNQ92626 1479 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 ACEP12821 1306 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 PSME1Q06323 249 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 TMC1Q8TDI8 760 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 POLR3GLQ9BT43 218 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 TOPAZ1Q8N9V7 1692 aa11.01□□□□□ -0.65
CDC42-201ENST00000315554 SOS2Q07890 1332 aaPredicted RBP11□□□□□ -0.65
CDC42-201ENST00000315554 TMF1P82094 1093 aa11□□□□□ -0.65
CDC42-201ENST00000315554 ITSN1Q15811 1721 aa11□□□□□ -0.65
CDC42-201ENST00000315554 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
CDC42-201ENST00000315554 ATAD2Q6PL18 1390 aa10.99□□□□□ -0.65
CDC42-201ENST00000315554 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
CDC42-201ENST00000315554 NUTM2BA6NNL0 878 aaPredicted RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 NUTM2EB1AL46 878 aaPredicted RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 MYT1Q01538 1121 aa10.99□□□□□ -0.65
CDC42-201ENST00000315554 NUTM2AQ8IVF1 878 aaPredicted RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 LRRC59Q96AG4 307 aaKnown RBP10.99□□□□□ -0.65
CDC42-201ENST00000315554 JCADQ9P266 1359 aa10.98□□□□□ -0.65
CDC42-201ENST00000315554 MAMSTRQ6ZN01 415 aa10.98□□□□□ -0.65
CDC42-201ENST00000315554 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
CDC42-201ENST00000315554 POLR3AO14802 1390 aaPredicted RBP10.97□□□□□ -0.65
CDC42-201ENST00000315554 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
CDC42-201ENST00000315554 C11orf95C9JLR9 678 aaPredicted RBP10.97□□□□□ -0.65
CDC42-201ENST00000315554 NUTM2GQ5VZR2 741 aa10.97□□□□□ -0.65
CDC42-201ENST00000315554 SPATA31A3Q5VYP0 1347 aa10.96□□□□□ -0.65
CDC42-201ENST00000315554 TNS3Q68CZ2 1445 aa10.96□□□□□ -0.66
CDC42-201ENST00000315554 CABLES1Q8TDN4 633 aa10.95□□□□□ -0.66
CDC42-201ENST00000315554 TRPM3Q9HCF6 1732 aaPredicted RBP10.94□□□□□ -0.66
CDC42-201ENST00000315554 C7P10643 843 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
CDC42-201ENST00000315554 ASTLQ6HA08 431 aaPredicted RBP10.94□□□□□ -0.66
CDC42-201ENST00000315554 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 SHPRHQ149N8 1683 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 SBNO1A3KN83 1393 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 LRP6O75581 1613 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 USP6P35125 1406 aa10.94□□□□□ -0.66
CDC42-201ENST00000315554 CDCA8Q53HL2 280 aa10.93□□□□□ -0.66
CDC42-201ENST00000315554 SLC39A7Q92504 469 aa10.93□□□□□ -0.66
CDC42-201ENST00000315554 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
CDC42-201ENST00000315554 KTN1Q86UP2 1357 aaKnown RBP10.93□□□□□ -0.66
CDC42-201ENST00000315554 ADAMTS2O95450 1211 aa10.93□□□□□ -0.66
CDC42-201ENST00000315554 ZEB1P37275 1124 aaPredicted RBP10.93□□□□□ -0.66
CDC42-201ENST00000315554 HDGFL2Q7Z4V5 671 aaPredicted RBP10.93□□□□□ -0.66
CDC42-201ENST00000315554 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDC42-201ENST00000315554 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
CDC42-201ENST00000315554 A0A1W2PP64 1363 aa10.93□□□□□ -0.66
CDC42-201ENST00000315554 MED1Q15648 1581 aaPredicted RBP10.92□□□□□ -0.66
CDC42-201ENST00000315554 CPSF1Q10570 1443 aaKnown RBP10.92□□□□□ -0.66
CDC42-201ENST00000315554 POTEJP0CG39 1038 aa10.92□□□□□ -0.66
CDC42-201ENST00000315554 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
CDC42-201ENST00000315554 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
CDC42-201ENST00000315554 KIF7Q2M1P5 1343 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 SPATA31A6Q5VVP1 1343 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 TTC21BQ7Z4L5 1316 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 AKAP12Q02952 1782 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 ALS2Q96Q42 1657 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
CDC42-201ENST00000315554 HAP1P54257 671 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms