RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 POLR3AO14802 1390 aaPredicted RBP33.56■■■□□ 2.96
CDPF1-201ENST00000314567 GGNBP2Q9H3C7 697 aa33.54■■■□□ 2.96
CDPF1-201ENST00000314567 ZNF692Q9BU19 519 aaPredicted RBP33.54■■■□□ 2.96
CDPF1-201ENST00000314567 USP6P35125 1406 aa33.54■■■□□ 2.96
CDPF1-201ENST00000314567 EDC4Q6P2E9 1401 aaKnown RBP33.54■■■□□ 2.96
CDPF1-201ENST00000314567 FYB1O15117 783 aa33.52■■■□□ 2.96
CDPF1-201ENST00000314567 NRKQ7Z2Y5 1582 aa33.52■■■□□ 2.96
CDPF1-201ENST00000314567 ZRANB1Q9UGI0 708 aa33.51■■■□□ 2.96
CDPF1-201ENST00000314567 KIF20BQ96Q89 1820 aa33.51■■■□□ 2.95
CDPF1-201ENST00000314567 NME9Q86XW9 330 aa33.5■■■□□ 2.95
CDPF1-201ENST00000314567 ZBED9Q6R2W3 1325 aa33.5■■■□□ 2.95
CDPF1-201ENST00000314567 FOXO3O43524 673 aa33.49■■■□□ 2.95
CDPF1-201ENST00000314567 TNNT2P45379 298 aaPredicted RBP33.49■■■□□ 2.95
CDPF1-201ENST00000314567 XPCQ01831 940 aaPredicted RBP33.48■■■□□ 2.95
CDPF1-201ENST00000314567 DDX17Q92841 729 aaKnown RBP33.47■■■□□ 2.95
CDPF1-201ENST00000314567 TTC21BQ7Z4L5 1316 aa33.47■■■□□ 2.95
CDPF1-201ENST00000314567 SSH2Q76I76 1423 aa33.46■■■□□ 2.95
CDPF1-201ENST00000314567 MORC1Q86VD1 984 aa33.46■■■□□ 2.95
CDPF1-201ENST00000314567 SLAIN2Q9P270 581 aa33.44■■■□□ 2.94
CDPF1-201ENST00000314567 INSRP06213 1382 aa33.44■■■□□ 2.94
CDPF1-201ENST00000314567 PSME1Q06323 249 aa33.42■■■□□ 2.94
CDPF1-201ENST00000314567 ANKRD26Q9UPS8 1709 aa33.42■■■□□ 2.94
CDPF1-201ENST00000314567 NSD2O96028 1365 aa33.41■■■□□ 2.94
CDPF1-201ENST00000314567 PPP2R1AP30153 589 aa33.41■■■□□ 2.94
CDPF1-201ENST00000314567 KIF1AQ12756 1690 aa33.41■■■□□ 2.94
CDPF1-201ENST00000314567 PAK3O75914 559 aaPredicted RBP33.4■■■□□ 2.94
CDPF1-201ENST00000314567 BRINP3Q76B58 766 aa33.39■■■□□ 2.94
CDPF1-201ENST00000314567 FBLN1P23142 703 aa33.38■■■□□ 2.93
CDPF1-201ENST00000314567 NUTM2GQ5VZR2 741 aa33.36■■■□□ 2.93
CDPF1-201ENST00000314567 PIK3C2AO00443 1686 aa33.36■■■□□ 2.93
CDPF1-201ENST00000314567 KRT28Q7Z3Y7 464 aa33.33■■■□□ 2.93
CDPF1-201ENST00000314567 TTC21AQ8NDW8 1320 aa33.33■■■□□ 2.93
CDPF1-201ENST00000314567 COG3Q96JB2 828 aa33.31■■■□□ 2.92
CDPF1-201ENST00000314567 ABTB2Q8N961 1025 aa33.29■■■□□ 2.92
CDPF1-201ENST00000314567 TRPM3Q9HCF6 1732 aaPredicted RBP33.29■■■□□ 2.92
CDPF1-201ENST00000314567 OVOS2A0A0J9YW53 1432 aa33.28■■■□□ 2.92
CDPF1-201ENST00000314567 OVOS2Q6IE36 1432 aa33.28■■■□□ 2.92
CDPF1-201ENST00000314567 BLMP54132 1417 aaPredicted RBP33.27■■■□□ 2.92
CDPF1-201ENST00000314567 SOX12O15370 315 aa33.27■■■□□ 2.92
CDPF1-201ENST00000314567 MARF1Q9Y4F3 1742 aaKnown RBP33.26■■■□□ 2.92
CDPF1-201ENST00000314567 PLEKHG5O94827 1062 aa33.26■■■□□ 2.91
CDPF1-201ENST00000314567 NLRP6P59044 892 aa33.26■■■□□ 2.91
CDPF1-201ENST00000314567 NPHP3Q7Z494 1330 aa33.25■■■□□ 2.91
CDPF1-201ENST00000314567 LMOD2Q6P5Q4 547 aa33.25■■■□□ 2.91
CDPF1-201ENST00000314567 PXDNQ92626 1479 aa33.23■■■□□ 2.91
CDPF1-201ENST00000314567 MTHFSP49914 203 aa33.23■■■□□ 2.91
CDPF1-201ENST00000314567 MAP2P11137 1827 aaKnown RBP33.22■■■□□ 2.91
CDPF1-201ENST00000314567 USP31Q70CQ4 1352 aa33.21■■■□□ 2.91
CDPF1-201ENST00000314567 ROBO1Q9Y6N7 1651 aa33.21■■■□□ 2.91
CDPF1-201ENST00000314567 RRS1Q15050 365 aaKnown RBP33.19■■■□□ 2.9
CDPF1-201ENST00000314567 EMILIN1Q9Y6C2 1016 aa33.17■■■□□ 2.9
CDPF1-201ENST00000314567 ALS2Q96Q42 1657 aa33.17■■■□□ 2.9
CDPF1-201ENST00000314567 POLKQ9UBT6 870 aa33.16■■■□□ 2.9
CDPF1-201ENST00000314567 PPM1GO15355 546 aaPredicted RBP33.16■■■□□ 2.9
CDPF1-201ENST00000314567 PIP4K2BP78356 416 aa33.16■■■□□ 2.9
CDPF1-201ENST00000314567 SMG6Q86US8 1419 aaKnown RBP33.15■■■□□ 2.9
CDPF1-201ENST00000314567 WDR43Q15061 677 aaKnown RBP eCLIP33.15■■■□□ 2.9
CDPF1-201ENST00000314567 NHSL1Q5SYE7 1610 aa33.15■■■□□ 2.9
CDPF1-201ENST00000314567 USP54Q70EL1 1684 aa33.14■■■□□ 2.9
CDPF1-201ENST00000314567 CERKQ8TCT0 537 aa33.14■■■□□ 2.9
CDPF1-201ENST00000314567 NEFLP07196 543 aa33.13■■■□□ 2.89
CDPF1-201ENST00000314567 UBAP1LF5GYI3 381 aa33.12■■■□□ 2.89
CDPF1-201ENST00000314567 SOS2Q07890 1332 aaPredicted RBP33.12■■■□□ 2.89
CDPF1-201ENST00000314567 SBNO1A3KN83 1393 aa33.12■■■□□ 2.89
CDPF1-201ENST00000314567 TNS3Q68CZ2 1445 aa33.12■■■□□ 2.89
CDPF1-201ENST00000314567 AATKQ6ZMQ8 1374 aa33.11■■■□□ 2.89
CDPF1-201ENST00000314567 TOM1O60784 492 aa33.11■■■□□ 2.89
CDPF1-201ENST00000314567 SUPT16HQ9Y5B9 1047 aaKnown RBP33.11■■■□□ 2.89
CDPF1-201ENST00000314567 SPATA31A3Q5VYP0 1347 aa33.1■■■□□ 2.89
CDPF1-201ENST00000314567 ADAMTS8Q9UP79 889 aa33.07■■■□□ 2.88
CDPF1-201ENST00000314567 CABLES1Q8TDN4 633 aa33.06■■■□□ 2.88
CDPF1-201ENST00000314567 PEAK1Q9H792 1746 aa33.06■■■□□ 2.88
CDPF1-201ENST00000314567 MED1Q15648 1581 aaPredicted RBP33.06■■■□□ 2.88
CDPF1-201ENST00000314567 NUDCQ9Y266 331 aa33.05■■■□□ 2.88
CDPF1-201ENST00000314567 MAP3K19Q56UN5 1328 aa33.04■■■□□ 2.88
CDPF1-201ENST00000314567 SHPRHQ149N8 1683 aa33.04■■■□□ 2.88
CDPF1-201ENST00000314567 SENP3-EIF4A1A0A087X0R7 540 aa33.03■■■□□ 2.88
CDPF1-201ENST00000314567 PDE3BQ13370 1112 aa33.03■■■□□ 2.88
CDPF1-201ENST00000314567 COL3A1P02461 1466 aaPredicted RBP33.03■■■□□ 2.88
CDPF1-201ENST00000314567 NFAT5O94916 1531 aa33.03■■■□□ 2.88
CDPF1-201ENST00000314567 USP19O94966 1318 aa33.02■■■□□ 2.88
CDPF1-201ENST00000314567 IQSEC2Q5JU85 1478 aa33.02■■■□□ 2.88
CDPF1-201ENST00000314567 CFAP53Q96M91 514 aa33.02■■■□□ 2.88
CDPF1-201ENST00000314567 SLIT3O75094 1523 aa33.01■■■□□ 2.87
CDPF1-201ENST00000314567 GCP02774 474 aa33.01■■■□□ 2.87
CDPF1-201ENST00000314567 AHDC1Q5TGY3 1603 aaPredicted RBP33■■■□□ 2.87
CDPF1-201ENST00000314567 PNPLA6Q8IY17 1366 aa33■■■□□ 2.87
CDPF1-201ENST00000314567 ZBTB7CA1YPR0 619 aa32.99■■■□□ 2.87
CDPF1-201ENST00000314567 FKBP8Q14318 412 aa32.99■■■□□ 2.87
CDPF1-201ENST00000314567 LTN1O94822 1766 aa32.99■■■□□ 2.87
CDPF1-201ENST00000314567 ARHGEF10O15013 1369 aa32.98■■■□□ 2.87
CDPF1-201ENST00000314567 CDK12Q9NYV4 1490 aaPredicted RBP32.98■■■□□ 2.87
CDPF1-201ENST00000314567 PHRF1Q9P1Y6 1649 aaKnown RBP32.97■■■□□ 2.87
CDPF1-201ENST00000314567 HSP90AB2PQ58FF8 381 aa32.97■■■□□ 2.87
CDPF1-201ENST00000314567 PHLPP1O60346 1717 aa32.96■■■□□ 2.87
CDPF1-201ENST00000314567 CRYBG1Q9Y4K1 1723 aa32.96■■■□□ 2.87
CDPF1-201ENST00000314567 KCNH5Q8NCM2 988 aa32.95■■■□□ 2.87
CDPF1-201ENST00000314567 AMPHP49418 695 aa32.95■■■□□ 2.86
CDPF1-201ENST00000314567 ZC3H6P61129 1189 aaKnown RBP32.93■■■□□ 2.86
CDPF1-201ENST00000314567 DIAPH1O60610 1272 aaKnown RBP32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms