RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
CKS2-201ENST00000314355 ABTB2Q8N961 1025 aa18.09■□□□□ 0.49
CKS2-201ENST00000314355 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
CKS2-201ENST00000314355 ROCK2O75116 1388 aaKnown RBP18.08■□□□□ 0.49
CKS2-201ENST00000314355 EVC2Q86UK5 1308 aa18.08■□□□□ 0.49
CKS2-201ENST00000314355 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
CKS2-201ENST00000314355 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
CKS2-201ENST00000314355 SEPT12Q8IYM1 358 aa18.07■□□□□ 0.48
CKS2-201ENST00000314355 EVA1CP58658 441 aa18.06■□□□□ 0.48
CKS2-201ENST00000314355 NUTM2GQ5VZR2 741 aa18.06■□□□□ 0.48
CKS2-201ENST00000314355 ATP7BP35670 1465 aa18.06■□□□□ 0.48
CKS2-201ENST00000314355 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
CKS2-201ENST00000314355 ITSN1Q15811 1721 aa18.06■□□□□ 0.48
CKS2-201ENST00000314355 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
CKS2-201ENST00000314355 TONSLQ96HA7 1378 aa18.04■□□□□ 0.48
CKS2-201ENST00000314355 CABP1Q9NZU7 370 aa18.04■□□□□ 0.48
CKS2-201ENST00000314355 ONECUT3O60422 494 aaPredicted RBP18.03■□□□□ 0.48
CKS2-201ENST00000314355 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
CKS2-201ENST00000314355 KRT27Q7Z3Y8 459 aa18.03■□□□□ 0.48
CKS2-201ENST00000314355 PPIP5K1Q6PFW1 1433 aa18.03■□□□□ 0.48
CKS2-201ENST00000314355 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.48
CKS2-201ENST00000314355 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.02■□□□□ 0.48
CKS2-201ENST00000314355 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
CKS2-201ENST00000314355 FAM98CQ17RN3 349 aaKnown RBP18.01■□□□□ 0.47
CKS2-201ENST00000314355 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
CKS2-201ENST00000314355 STRN4Q9NRL3 753 aa18■□□□□ 0.47
CKS2-201ENST00000314355 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
CKS2-201ENST00000314355 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
CKS2-201ENST00000314355 NWD2Q9ULI1 1742 aa17.99■□□□□ 0.47
CKS2-201ENST00000314355 NLRP6P59044 892 aa17.99■□□□□ 0.47
CKS2-201ENST00000314355 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
CKS2-201ENST00000314355 KIAA0232Q92628 1395 aa17.98■□□□□ 0.47
CKS2-201ENST00000314355 ALS2Q96Q42 1657 aa17.98■□□□□ 0.47
CKS2-201ENST00000314355 SPATA31A5Q5VU36 1347 aa17.97■□□□□ 0.47
CKS2-201ENST00000314355 SPATA31A7Q8IWB4 1347 aa17.97■□□□□ 0.47
CKS2-201ENST00000314355 COL14A1Q05707 1796 aaKnown RBP17.96■□□□□ 0.47
CKS2-201ENST00000314355 ZBTB7CA1YPR0 619 aa17.96■□□□□ 0.47
CKS2-201ENST00000314355 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
CKS2-201ENST00000314355 GCP02774 474 aa17.96■□□□□ 0.47
CKS2-201ENST00000314355 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
CKS2-201ENST00000314355 GLI3P10071 1580 aa17.96■□□□□ 0.46
CKS2-201ENST00000314355 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
CKS2-201ENST00000314355 USP35Q9P2H5 1018 aa17.94■□□□□ 0.46
CKS2-201ENST00000314355 ABCA3Q99758 1704 aa17.93■□□□□ 0.46
CKS2-201ENST00000314355 TRPM1Q7Z4N2 1603 aa17.93■□□□□ 0.46
CKS2-201ENST00000314355 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
CKS2-201ENST00000314355 BAG6P46379 1132 aa17.92■□□□□ 0.46
CKS2-201ENST00000314355 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
CKS2-201ENST00000314355 KCNH5Q8NCM2 988 aa17.92■□□□□ 0.46
CKS2-201ENST00000314355 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
CKS2-201ENST00000314355 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
CKS2-201ENST00000314355 USP6P35125 1406 aa17.9■□□□□ 0.46
CKS2-201ENST00000314355 TOPAZ1Q8N9V7 1692 aa17.9■□□□□ 0.46
CKS2-201ENST00000314355 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
CKS2-201ENST00000314355 USP19O94966 1318 aa17.9■□□□□ 0.46
CKS2-201ENST00000314355 CPDO75976 1380 aa17.9■□□□□ 0.46
CKS2-201ENST00000314355 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
CKS2-201ENST00000314355 THRAP3Q9Y2W1 955 aaKnown RBP17.89■□□□□ 0.45
CKS2-201ENST00000314355 TTC21AQ8NDW8 1320 aa17.89■□□□□ 0.45
CKS2-201ENST00000314355 FAM196AQ6ZSG2 479 aa17.88■□□□□ 0.45
CKS2-201ENST00000314355 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
CKS2-201ENST00000314355 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
CKS2-201ENST00000314355 KTN1Q86UP2 1357 aaKnown RBP17.88■□□□□ 0.45
CKS2-201ENST00000314355 LARP1Q6PKG0 1096 aaKnown RBP17.87■□□□□ 0.45
CKS2-201ENST00000314355 DEFB132Q7Z7B7 95 aa17.87■□□□□ 0.45
CKS2-201ENST00000314355 TERF2IPQ9NYB0 399 aa17.86■□□□□ 0.45
CKS2-201ENST00000314355 C11orf95C9JLR9 678 aaPredicted RBP17.85■□□□□ 0.45
CKS2-201ENST00000314355 SOX12O15370 315 aa17.85■□□□□ 0.45
CKS2-201ENST00000314355 TOM1L2Q6ZVM7 507 aa17.85■□□□□ 0.45
CKS2-201ENST00000314355 SSH2Q76I76 1423 aa17.85■□□□□ 0.45
CKS2-201ENST00000314355 PUS7Q96PZ0 661 aaKnown RBP17.85■□□□□ 0.45
CKS2-201ENST00000314355 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
CKS2-201ENST00000314355 NRAPQ86VF7 1730 aa17.84■□□□□ 0.45
CKS2-201ENST00000314355 CSB-PGBD3P0DP91 1061 aa17.84■□□□□ 0.45
CKS2-201ENST00000314355 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.84■□□□□ 0.45
CKS2-201ENST00000314355 BRWD3Q6RI45 1802 aa17.84■□□□□ 0.45
CKS2-201ENST00000314355 PHRF1Q9P1Y6 1649 aaKnown RBP17.83■□□□□ 0.45
CKS2-201ENST00000314355 FAM182BQ5T319 152 aa17.83■□□□□ 0.44
CKS2-201ENST00000314355 CRYBG1Q9Y4K1 1723 aa17.83■□□□□ 0.44
CKS2-201ENST00000314355 AATKQ6ZMQ8 1374 aa17.82■□□□□ 0.44
CKS2-201ENST00000314355 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
CKS2-201ENST00000314355 CDCA7Q9BWT1 371 aaPredicted RBP17.8■□□□□ 0.44
CKS2-201ENST00000314355 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
CKS2-201ENST00000314355 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
CKS2-201ENST00000314355 TIMELESSQ9UNS1 1208 aa17.8■□□□□ 0.44
CKS2-201ENST00000314355 CAMTA1Q9Y6Y1 1673 aa17.8■□□□□ 0.44
CKS2-201ENST00000314355 NRKQ7Z2Y5 1582 aa17.79■□□□□ 0.44
CKS2-201ENST00000314355 TRIM37O94972 964 aa17.79■□□□□ 0.44
CKS2-201ENST00000314355 EN1Q05925 392 aaPredicted RBP17.79■□□□□ 0.44
CKS2-201ENST00000314355 ARHGEF25Q86VW2 580 aa17.79■□□□□ 0.44
CKS2-201ENST00000314355 CRB1P82279 1406 aa17.79■□□□□ 0.44
CKS2-201ENST00000314355 CPSF1Q10570 1443 aaKnown RBP17.79■□□□□ 0.44
CKS2-201ENST00000314355 APBA3O96018 575 aa17.78■□□□□ 0.44
CKS2-201ENST00000314355 TMF1P82094 1093 aa17.78■□□□□ 0.44
CKS2-201ENST00000314355 DDB1Q16531 1140 aa17.78■□□□□ 0.44
CKS2-201ENST00000314355 CDCA8Q53HL2 280 aa17.77■□□□□ 0.44
CKS2-201ENST00000314355 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
CKS2-201ENST00000314355 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
CKS2-201ENST00000314355 AXIN2Q9Y2T1 843 aa17.75■□□□□ 0.43
CKS2-201ENST00000314355 NINLQ9Y2I6 1382 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms