RNA–Protein interactions for RNA: ENST00000311832.5

COMMD1-201, Transcript of copper metabolism domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-201ENST00000311832 CCDC61Q9Y6R9 512 aa26.99■■□□□ 1.91
COMMD1-201ENST00000311832 ACEP12821 1306 aa26.98■■□□□ 1.91
COMMD1-201ENST00000311832 PPIP5K1Q6PFW1 1433 aa26.98■■□□□ 1.91
COMMD1-201ENST00000311832 COL14A1Q05707 1796 aaKnown RBP26.97■■□□□ 1.91
COMMD1-201ENST00000311832 PLEKHG3A1L390 1219 aa26.97■■□□□ 1.91
COMMD1-201ENST00000311832 CABP2Q9NPB3 220 aa26.97■■□□□ 1.91
COMMD1-201ENST00000311832 RALGAPBQ86X10 1494 aa26.96■■□□□ 1.91
COMMD1-201ENST00000311832 HAP1P54257 671 aaPredicted RBP26.96■■□□□ 1.91
COMMD1-201ENST00000311832 UPF1Q92900 1129 aaKnown RBP eCLIP26.96■■□□□ 1.91
COMMD1-201ENST00000311832 SRPK2P78362 688 aaKnown RBP26.95■■□□□ 1.9
COMMD1-201ENST00000311832 UNC5CLQ8IV45 518 aa26.95■■□□□ 1.9
COMMD1-201ENST00000311832 TONSLQ96HA7 1378 aa26.95■■□□□ 1.9
COMMD1-201ENST00000311832 PAK3O75914 559 aaPredicted RBP26.94■■□□□ 1.9
COMMD1-201ENST00000311832 BRWD3Q6RI45 1802 aa26.93■■□□□ 1.9
COMMD1-201ENST00000311832 FAM83GA6ND36 823 aa26.92■■□□□ 1.9
COMMD1-201ENST00000311832 GJD4Q96KN9 370 aaPredicted RBP26.92■■□□□ 1.9
COMMD1-201ENST00000311832 AKAP12Q02952 1782 aa26.92■■□□□ 1.9
COMMD1-201ENST00000311832 NRKQ7Z2Y5 1582 aa26.91■■□□□ 1.9
COMMD1-201ENST00000311832 EP400Q96L91 3159 aa26.89■■□□□ 1.9
COMMD1-201ENST00000311832 EVC2Q86UK5 1308 aa26.87■■□□□ 1.89
COMMD1-201ENST00000311832 PIK3C2AO00443 1686 aa26.85■■□□□ 1.89
COMMD1-201ENST00000311832 VPS72Q15906 364 aa26.85■■□□□ 1.89
COMMD1-201ENST00000311832 NUTM2GQ5VZR2 741 aa26.85■■□□□ 1.89
COMMD1-201ENST00000311832 CABP1Q9NZU7 370 aa26.85■■□□□ 1.89
COMMD1-201ENST00000311832 USP6P35125 1406 aa26.84■■□□□ 1.89
COMMD1-201ENST00000311832 CARD11Q9BXL7 1154 aa26.84■■□□□ 1.89
COMMD1-201ENST00000311832 SBNO2Q9Y2G9 1366 aa26.84■■□□□ 1.89
COMMD1-201ENST00000311832 SSH2Q76I76 1423 aa26.82■■□□□ 1.88
COMMD1-201ENST00000311832 BTG4Q9NY30 223 aa26.82■■□□□ 1.88
COMMD1-201ENST00000311832 LMO7Q8WWI1 1683 aa26.81■■□□□ 1.88
COMMD1-201ENST00000311832 MON2Q7Z3U7 1717 aa26.81■■□□□ 1.88
COMMD1-201ENST00000311832 KIAA0232Q92628 1395 aa26.81■■□□□ 1.88
COMMD1-201ENST00000311832 USP19O94966 1318 aa26.8■■□□□ 1.88
COMMD1-201ENST00000311832 ATAD2Q6PL18 1390 aa26.8■■□□□ 1.88
COMMD1-201ENST00000311832 ABTB2Q8N961 1025 aa26.78■■□□□ 1.88
COMMD1-201ENST00000311832 BRD4O60885 1362 aaPredicted RBP26.78■■□□□ 1.88
COMMD1-201ENST00000311832 SLIT3O75094 1523 aa26.76■■□□□ 1.87
COMMD1-201ENST00000311832 PRDM11Q9NQV5 511 aa26.76■■□□□ 1.87
COMMD1-201ENST00000311832 CPSF1Q10570 1443 aaKnown RBP26.75■■□□□ 1.87
COMMD1-201ENST00000311832 ZC3H6P61129 1189 aaKnown RBP26.75■■□□□ 1.87
COMMD1-201ENST00000311832 CHRNA2Q15822 529 aa26.75■■□□□ 1.87
COMMD1-201ENST00000311832 THSD7AQ9UPZ6 1657 aa26.74■■□□□ 1.87
COMMD1-201ENST00000311832 ONECUT3O60422 494 aaPredicted RBP26.74■■□□□ 1.87
COMMD1-201ENST00000311832 CCDC9Q9Y3X0 531 aaKnown RBP26.74■■□□□ 1.87
COMMD1-201ENST00000311832 CAMTA1Q9Y6Y1 1673 aa26.73■■□□□ 1.87
COMMD1-201ENST00000311832 CD163L1Q9NR16 1453 aa26.73■■□□□ 1.87
COMMD1-201ENST00000311832 SEPT12Q8IYM1 358 aa26.72■■□□□ 1.87
COMMD1-201ENST00000311832 CPDO75976 1380 aa26.71■■□□□ 1.87
COMMD1-201ENST00000311832 SPATA31A5Q5VU36 1347 aa26.7■■□□□ 1.87
COMMD1-201ENST00000311832 SPATA31A7Q8IWB4 1347 aa26.7■■□□□ 1.87
COMMD1-201ENST00000311832 NLRP13Q86W25 1043 aa26.7■■□□□ 1.86
COMMD1-201ENST00000311832 COL18A1P39060 1754 aa26.7■■□□□ 1.86
COMMD1-201ENST00000311832 USP54Q70EL1 1684 aa26.69■■□□□ 1.86
COMMD1-201ENST00000311832 GCP02774 474 aa26.68■■□□□ 1.86
COMMD1-201ENST00000311832 TTC21BQ7Z4L5 1316 aa26.67■■□□□ 1.86
COMMD1-201ENST00000311832 FAM98CQ17RN3 349 aaKnown RBP26.67■■□□□ 1.86
COMMD1-201ENST00000311832 TESK2Q96S53 571 aa26.67■■□□□ 1.86
COMMD1-201ENST00000311832 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
COMMD1-201ENST00000311832 RGPD5Q99666 1765 aa26.66■■□□□ 1.86
COMMD1-201ENST00000311832 NLRP6P59044 892 aa26.65■■□□□ 1.86
COMMD1-201ENST00000311832 ZNF692Q9BU19 519 aaPredicted RBP26.65■■□□□ 1.86
COMMD1-201ENST00000311832 KTN1Q86UP2 1357 aaKnown RBP26.65■■□□□ 1.86
COMMD1-201ENST00000311832 ST20-MTHFSA0A0A6YYL1 179 aa26.64■■□□□ 1.86
COMMD1-201ENST00000311832 SPATA31A1Q5TZJ5 1347 aa26.64■■□□□ 1.85
COMMD1-201ENST00000311832 STRN4Q9NRL3 753 aa26.63■■□□□ 1.85
COMMD1-201ENST00000311832 COL5A2P05997 1499 aaPredicted RBP26.62■■□□□ 1.85
COMMD1-201ENST00000311832 NFAT5O94916 1531 aa26.61■■□□□ 1.85
COMMD1-201ENST00000311832 TTC21AQ8NDW8 1320 aa26.61■■□□□ 1.85
COMMD1-201ENST00000311832 KRT27Q7Z3Y8 459 aa26.6■■□□□ 1.85
COMMD1-201ENST00000311832 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
COMMD1-201ENST00000311832 SLC12A5Q9H2X9 1139 aa26.59■■□□□ 1.85
COMMD1-201ENST00000311832 WNK3Q9BYP7 1800 aa26.58■■□□□ 1.84
COMMD1-201ENST00000311832 USP47Q96K76 1375 aa26.58■■□□□ 1.84
COMMD1-201ENST00000311832 BLMP54132 1417 aaPredicted RBP26.57■■□□□ 1.84
COMMD1-201ENST00000311832 A0A0G2JS52 829 aa26.57■■□□□ 1.84
COMMD1-201ENST00000311832 MYT1Q01538 1121 aa26.57■■□□□ 1.84
COMMD1-201ENST00000311832 LARP1Q6PKG0 1096 aaKnown RBP26.57■■□□□ 1.84
COMMD1-201ENST00000311832 PUS7Q96PZ0 661 aaKnown RBP26.57■■□□□ 1.84
COMMD1-201ENST00000311832 A0A1W2PP64 1363 aa26.57■■□□□ 1.84
COMMD1-201ENST00000311832 ZRANB1Q9UGI0 708 aa26.56■■□□□ 1.84
COMMD1-201ENST00000311832 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
COMMD1-201ENST00000311832 LTN1O94822 1766 aa26.56■■□□□ 1.84
COMMD1-201ENST00000311832 TMC1Q8TDI8 760 aa26.55■■□□□ 1.84
COMMD1-201ENST00000311832 TNS1Q9HBL0 1735 aaKnown RBP26.54■■□□□ 1.84
COMMD1-201ENST00000311832 PARP4Q9UKK3 1724 aaKnown RBP26.54■■□□□ 1.84
COMMD1-201ENST00000311832 CCDC125Q86Z20 511 aa26.54■■□□□ 1.84
COMMD1-201ENST00000311832 USP31Q70CQ4 1352 aa26.54■■□□□ 1.84
COMMD1-201ENST00000311832 RGPD1P0DJD0 1748 aa26.53■■□□□ 1.84
COMMD1-201ENST00000311832 EVA1CP58658 441 aa26.53■■□□□ 1.84
COMMD1-201ENST00000311832 TIMELESSQ9UNS1 1208 aa26.53■■□□□ 1.84
COMMD1-201ENST00000311832 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
COMMD1-201ENST00000311832 ZBTB7CA1YPR0 619 aa26.52■■□□□ 1.84
COMMD1-201ENST00000311832 FAM182BQ5T319 152 aa26.52■■□□□ 1.84
COMMD1-201ENST00000311832 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.52■■□□□ 1.84
COMMD1-201ENST00000311832 USP35Q9P2H5 1018 aa26.52■■□□□ 1.84
COMMD1-201ENST00000311832 ARHGEF25Q86VW2 580 aa26.51■■□□□ 1.83
COMMD1-201ENST00000311832 NME9Q86XW9 330 aa26.51■■□□□ 1.83
COMMD1-201ENST00000311832 AXIN2Q9Y2T1 843 aa26.51■■□□□ 1.83
COMMD1-201ENST00000311832 MYOM1P52179 1685 aa26.5■■□□□ 1.83
COMMD1-201ENST00000311832 CRB1P82279 1406 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 819.5 ms