RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
PTPN2-201ENST00000309660 C8orf34Q49A92 452 aa14.81□□□□□ -0.04
PTPN2-201ENST00000309660 NME9Q86XW9 330 aa14.81□□□□□ -0.04
PTPN2-201ENST00000309660 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
PTPN2-201ENST00000309660 PCDHB15Q9Y5E8 787 aa14.8□□□□□ -0.04
PTPN2-201ENST00000309660 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
PTPN2-201ENST00000309660 CCDC27Q2M243 656 aa14.8□□□□□ -0.04
PTPN2-201ENST00000309660 EMILIN1Q9Y6C2 1016 aa14.8□□□□□ -0.04
PTPN2-201ENST00000309660 THUMPD2Q9BTF0 503 aaKnown RBP14.8□□□□□ -0.04
PTPN2-201ENST00000309660 ALKQ9UM73 1620 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 ZKSCAN2Q63HK3 967 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 ITPRIPQ8IWB1 547 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 DDRGK1Q96HY6 314 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 TRIM35Q9UPQ4 493 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 RIMBP3CA6NJZ7 1639 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 RIMBP3BA6NNM3 1639 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 RIMBP3Q9UFD9 1639 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 ELL2O00472 640 aaPredicted RBP14.79□□□□□ -0.04
PTPN2-201ENST00000309660 PLEKHF1Q96S99 279 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 IQSEC2Q5JU85 1478 aa14.79□□□□□ -0.04
PTPN2-201ENST00000309660 BCL11AQ9H165 835 aa14.78□□□□□ -0.04
PTPN2-201ENST00000309660 RRS1Q15050 365 aaKnown RBP14.78□□□□□ -0.04
PTPN2-201ENST00000309660 SSH1Q8WYL5 1049 aa14.78□□□□□ -0.04
PTPN2-201ENST00000309660 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
PTPN2-201ENST00000309660 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
PTPN2-201ENST00000309660 DIP2BQ9P265 1576 aa14.77□□□□□ -0.04
PTPN2-201ENST00000309660 WASLO00401 505 aaPredicted RBP14.77□□□□□ -0.05
PTPN2-201ENST00000309660 A2ML1A8K2U0 1454 aa14.77□□□□□ -0.05
PTPN2-201ENST00000309660 METP08581 1390 aa14.77□□□□□ -0.05
PTPN2-201ENST00000309660 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
PTPN2-201ENST00000309660 NUDT16Q96DE0 195 aaKnown RBP14.76□□□□□ -0.05
PTPN2-201ENST00000309660 CLTCQ00610 1675 aaKnown RBP14.76□□□□□ -0.05
PTPN2-201ENST00000309660 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
PTPN2-201ENST00000309660 CEBPAP49715 358 aaPredicted RBP14.76□□□□□ -0.05
PTPN2-201ENST00000309660 ZMYM3Q14202 1370 aa14.76□□□□□ -0.05
PTPN2-201ENST00000309660 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
PTPN2-201ENST00000309660 TRIM27P14373 513 aa14.75□□□□□ -0.05
PTPN2-201ENST00000309660 MVPQ14764 893 aaKnown RBP14.75□□□□□ -0.05
PTPN2-201ENST00000309660 PHACTR3Q96KR7 559 aa14.75□□□□□ -0.05
PTPN2-201ENST00000309660 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
PTPN2-201ENST00000309660 PNNQ9H307 717 aaKnown RBP14.74□□□□□ -0.05
PTPN2-201ENST00000309660 PDZRN3Q9UPQ7 1066 aa14.74□□□□□ -0.05
PTPN2-201ENST00000309660 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.74□□□□□ -0.05
PTPN2-201ENST00000309660 COG3Q96JB2 828 aa14.74□□□□□ -0.05
PTPN2-201ENST00000309660 SLC26A8Q96RN1 970 aa14.74□□□□□ -0.05
PTPN2-201ENST00000309660 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
PTPN2-201ENST00000309660 ARHGEF40Q8TER5 1519 aa14.74□□□□□ -0.05
PTPN2-201ENST00000309660 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
PTPN2-201ENST00000309660 PPIP5K1Q6PFW1 1433 aa14.73□□□□□ -0.05
PTPN2-201ENST00000309660 FCHSD2O94868 740 aa14.72□□□□□ -0.05
PTPN2-201ENST00000309660 SEC24BO95487 1268 aa14.72□□□□□ -0.05
PTPN2-201ENST00000309660 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
PTPN2-201ENST00000309660 CCDC61Q9Y6R9 512 aa14.72□□□□□ -0.05
PTPN2-201ENST00000309660 ATF7IPQ6VMQ6 1270 aa14.71□□□□□ -0.05
PTPN2-201ENST00000309660 RSPH6AQ9H0K4 717 aa14.71□□□□□ -0.06
PTPN2-201ENST00000309660 TMEM57Q8N5G2 664 aa14.7□□□□□ -0.06
PTPN2-201ENST00000309660 NLRP1Q9C000 1473 aa14.7□□□□□ -0.06
PTPN2-201ENST00000309660 DCTN1Q14203 1278 aa14.69□□□□□ -0.06
PTPN2-201ENST00000309660 FAM83GA6ND36 823 aa14.69□□□□□ -0.06
PTPN2-201ENST00000309660 TNRQ92752 1358 aa14.68□□□□□ -0.06
PTPN2-201ENST00000309660 COL3A1P02461 1466 aaPredicted RBP14.68□□□□□ -0.06
PTPN2-201ENST00000309660 DDX19BQ9UMR2 479 aa14.68□□□□□ -0.06
PTPN2-201ENST00000309660 NFE2L2Q16236 605 aa14.67□□□□□ -0.06
PTPN2-201ENST00000309660 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
PTPN2-201ENST00000309660 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
PTPN2-201ENST00000309660 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
PTPN2-201ENST00000309660 UPF2Q9HAU5 1272 aaKnown RBP14.67□□□□□ -0.06
PTPN2-201ENST00000309660 C1orf115Q9H7X2 142 aa14.66□□□□□ -0.06
PTPN2-201ENST00000309660 AGLP35573 1532 aa14.66□□□□□ -0.06
PTPN2-201ENST00000309660 PNPLA6Q8IY17 1366 aa14.66□□□□□ -0.06
PTPN2-201ENST00000309660 PRR36Q9H6K5 1346 aa14.66□□□□□ -0.06
PTPN2-201ENST00000309660 LTKP29376 864 aa14.65□□□□□ -0.06
PTPN2-201ENST00000309660 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
PTPN2-201ENST00000309660 IL13P35225 146 aa14.65□□□□□ -0.06
PTPN2-201ENST00000309660 AEBP1Q8IUX7 1158 aa14.65□□□□□ -0.06
PTPN2-201ENST00000309660 IL16Q14005 1332 aa14.65□□□□□ -0.07
PTPN2-201ENST00000309660 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
PTPN2-201ENST00000309660 SULT6B1Q6IMI4 303 aa14.64□□□□□ -0.07
PTPN2-201ENST00000309660 EDC4Q6P2E9 1401 aaKnown RBP14.64□□□□□ -0.07
PTPN2-201ENST00000309660 AAMPQ13685 434 aa14.64□□□□□ -0.07
PTPN2-201ENST00000309660 SLKQ9H2G2 1235 aaPredicted RBP14.64□□□□□ -0.07
PTPN2-201ENST00000309660 LRRC7Q96NW7 1537 aa14.64□□□□□ -0.07
PTPN2-201ENST00000309660 ADGRB2O60241 1585 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 MED14O60244 1454 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 ATP7BP35670 1465 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 ROBO2Q9HCK4 1378 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
PTPN2-201ENST00000309660 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 ACEP12821 1306 aa14.63□□□□□ -0.07
PTPN2-201ENST00000309660 LNPKQ9C0E8 428 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 EID1Q9Y6B2 187 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 TMEM2Q9UHN6 1383 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 MFAP1P55081 439 aaKnown RBP14.62□□□□□ -0.07
PTPN2-201ENST00000309660 GNAI1P63096 354 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 NFKBIBQ15653 356 aa14.62□□□□□ -0.07
PTPN2-201ENST00000309660 PLEKHG5O94827 1062 aa14.61□□□□□ -0.07
PTPN2-201ENST00000309660 CALD1Q05682 793 aaKnown RBP14.61□□□□□ -0.07
PTPN2-201ENST00000309660 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
PTPN2-201ENST00000309660 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms