RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 CRACR2AQ9BSW2 395 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 CHIC2Q9UKJ5 165 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 H3BQV1 296 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 IFFO2Q5TF58 517 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 BAZ1AQ9NRL2 1556 aaPredicted RBP9.29□□□□□ -0.92
RSF1-201ENST00000308488 BRD4O60885 1362 aaPredicted RBP9.29□□□□□ -0.92
RSF1-201ENST00000308488 NAA25Q14CX7 972 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 BICD2Q8TD16 824 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 CEP83Q9Y592 693 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 CCDC172P0C7W6 258 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 EBAG9O00559 213 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 CCDC183Q5T5S1 534 aa9.29□□□□□ -0.92
RSF1-201ENST00000308488 NOL8Q76FK4 1167 aaKnown RBP9.29□□□□□ -0.92
RSF1-201ENST00000308488 SPATS2LQ9NUQ6 558 aaKnown RBP9.28□□□□□ -0.92
RSF1-201ENST00000308488 HMGB1P1B2RPK0 211 aaPredicted RBP9.28□□□□□ -0.92
RSF1-201ENST00000308488 HSPA4P34932 840 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 EIF5P55010 431 aaKnown RBP9.28□□□□□ -0.92
RSF1-201ENST00000308488 CEP112Q8N8E3 955 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 RRP7BPQ9NSQ0 103 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 ZKSCAN2Q63HK3 967 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 CEP135Q66GS9 1140 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 TMF1P82094 1093 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 SEPT6Q14141 434 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 NUCKS1Q9H1E3 243 aaKnown RBP9.28□□□□□ -0.92
RSF1-201ENST00000308488 PPP2R5AQ15172 486 aa9.28□□□□□ -0.92
RSF1-201ENST00000308488 WDR33Q9C0J8 1336 aaKnown RBP9.27□□□□□ -0.92
RSF1-201ENST00000308488 IBSPP21815 317 aaPredicted RBP9.27□□□□□ -0.92
RSF1-201ENST00000308488 NBPF6Q5VWK0 638 aa9.27□□□□□ -0.92
RSF1-201ENST00000308488 NBPF5PQ86XG9 351 aaPredicted RBP9.27□□□□□ -0.92
RSF1-201ENST00000308488 SMARCC1Q92922 1105 aaPredicted RBP9.27□□□□□ -0.92
RSF1-201ENST00000308488 NBPF4Q96M43 638 aa9.27□□□□□ -0.92
RSF1-201ENST00000308488 PLEKHD1A6NEE1 506 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 KLHL40Q2TBA0 621 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 C16orf45Q96MC5 204 aaPredicted RBP9.27□□□□□ -0.93
RSF1-201ENST00000308488 MPNDQ8N594 471 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 ZNHIT6Q9NWK9 470 aaKnown RBP9.27□□□□□ -0.93
RSF1-201ENST00000308488 TNPO1Q92973 898 aaKnown RBP9.27□□□□□ -0.93
RSF1-201ENST00000308488 ERCC3P19447 782 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 KRBA2Q6ZNG9 492 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 SRRTQ9BXP5 876 aaKnown RBP9.27□□□□□ -0.93
RSF1-201ENST00000308488 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.27□□□□□ -0.93
RSF1-201ENST00000308488 SATB1Q01826 763 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 DBN1Q16643 649 aa9.27□□□□□ -0.93
RSF1-201ENST00000308488 SH2D4BQ5SQS7 431 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 INTS3Q68E01 1043 aaKnown RBP9.26□□□□□ -0.93
RSF1-201ENST00000308488 SKIDA1Q1XH10 827 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 ARHGAP35Q9NRY4 1499 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 TRDNQ13061 729 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 IGSF3O75054 1194 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
RSF1-201ENST00000308488 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
RSF1-201ENST00000308488 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 FMNL2Q96PY5 1086 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 CBFA2T2O43439 604 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 CAVIN2O95810 425 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 TCHPQ9BT92 498 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 TMX1Q9H3N1 280 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 ARFGAP3Q9NP61 516 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 SMC3Q9UQE7 1217 aa9.26□□□□□ -0.93
RSF1-201ENST00000308488 AKAP17AQ02040 695 aaKnown RBP9.26□□□□□ -0.93
RSF1-201ENST00000308488 CLASRPQ8N2M8 674 aaKnown RBP9.26□□□□□ -0.93
RSF1-201ENST00000308488 PLEKHH1Q9ULM0 1364 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 FAM184BQ9ULE4 1060 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 SH3BGRP55822 239 aaPredicted RBP9.25□□□□□ -0.93
RSF1-201ENST00000308488 PDCP20941 246 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 FAM114A1Q8IWE2 563 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 CNKSR2Q8WXI2 1034 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 OLFM4Q6UX06 510 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 SFPQP23246 707 aaKnown RBP eCLIP9.25□□□□□ -0.93
RSF1-201ENST00000308488 CCDC38Q502W7 563 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 ERLIN2O94905 339 aa9.25□□□□□ -0.93
RSF1-201ENST00000308488 YY1AP1Q9H869 796 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 DDX19BQ9UMR2 479 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 CAPN2P17655 700 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 GCKP35557 465 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 TNMDQ9H2S6 317 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 CCDC7Q96M83 1385 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 ZSCAN12O43309 604 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 GSDMDP57764 484 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 B4GALNT4Q76KP1 1039 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 CEP57Q86XR8 500 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 RPUSD2Q8IZ73 545 aaKnown RBP9.24□□□□□ -0.93
RSF1-201ENST00000308488 NCAPGQ9BPX3 1015 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 TBC1D2Q9BYX2 928 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 KINO60870 393 aaKnown RBP9.24□□□□□ -0.93
RSF1-201ENST00000308488 NBPF11Q86T75 865 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 WDR63Q8IWG1 891 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 KIF3CO14782 793 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 VEZTQ9HBM0 779 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 MSL1Q68DK7 614 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 SMARCE1Q969G3 411 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 JRKLQ9Y4A0 524 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 ZNF500O60304 480 aaPredicted RBP9.24□□□□□ -0.93
RSF1-201ENST00000308488 TUBB4BP68371 445 aa9.24□□□□□ -0.93
RSF1-201ENST00000308488 DZIP1Q86YF9 867 aaKnown RBP9.24□□□□□ -0.93
RSF1-201ENST00000308488 DNAJC21Q5F1R6 531 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms