RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

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Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 HDGFL2Q7Z4V5 671 aaPredicted RBP20.8■□□□□ 0.92
LONRF3-201ENST00000304778 TMEM2Q9UHN6 1383 aa20.8■□□□□ 0.92
LONRF3-201ENST00000304778 TXNDC2Q86VQ3 553 aa20.79■□□□□ 0.92
LONRF3-201ENST00000304778 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
LONRF3-201ENST00000304778 UBR1Q8IWV7 1749 aa20.79■□□□□ 0.92
LONRF3-201ENST00000304778 BCAR3O75815 825 aa20.77■□□□□ 0.92
LONRF3-201ENST00000304778 C8orf34Q49A92 452 aa20.77■□□□□ 0.92
LONRF3-201ENST00000304778 RUNDC1Q96C34 613 aa20.77■□□□□ 0.92
LONRF3-201ENST00000304778 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
LONRF3-201ENST00000304778 FAM43AQ8N2R8 423 aa20.76■□□□□ 0.91
LONRF3-201ENST00000304778 NLRP1Q9C000 1473 aa20.76■□□□□ 0.91
LONRF3-201ENST00000304778 RGS3P49796 1198 aa20.76■□□□□ 0.91
LONRF3-201ENST00000304778 WASLO00401 505 aaPredicted RBP20.74■□□□□ 0.91
LONRF3-201ENST00000304778 FRAT2O75474 233 aaPredicted RBP20.74■□□□□ 0.91
LONRF3-201ENST00000304778 WWC1Q8IX03 1113 aa20.74■□□□□ 0.91
LONRF3-201ENST00000304778 NEUROD2Q15784 382 aa20.74■□□□□ 0.91
LONRF3-201ENST00000304778 RRP7AQ9Y3A4 280 aaKnown RBP20.74■□□□□ 0.91
LONRF3-201ENST00000304778 VIRMAQ69YN4 1812 aaKnown RBP20.74■□□□□ 0.91
LONRF3-201ENST00000304778 MED14O60244 1454 aa20.73■□□□□ 0.91
LONRF3-201ENST00000304778 TCP11L2Q8N4U5 519 aa20.73■□□□□ 0.91
LONRF3-201ENST00000304778 LTKP29376 864 aa20.73■□□□□ 0.91
LONRF3-201ENST00000304778 ANKRD26Q9UPS8 1709 aa20.72■□□□□ 0.91
LONRF3-201ENST00000304778 IQSEC2Q5JU85 1478 aa20.72■□□□□ 0.91
LONRF3-201ENST00000304778 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
LONRF3-201ENST00000304778 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
LONRF3-201ENST00000304778 PDE3AQ14432 1141 aa20.72■□□□□ 0.91
LONRF3-201ENST00000304778 SIRT1Q96EB6 747 aa20.71■□□□□ 0.91
LONRF3-201ENST00000304778 TECPR2O15040 1411 aa20.71■□□□□ 0.91
LONRF3-201ENST00000304778 FAM135BQ49AJ0 1406 aa20.71■□□□□ 0.91
LONRF3-201ENST00000304778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.71■□□□□ 0.91
LONRF3-201ENST00000304778 ATP7BP35670 1465 aa20.71■□□□□ 0.91
LONRF3-201ENST00000304778 DAXXQ9UER7 740 aaPredicted RBP20.7■□□□□ 0.9
LONRF3-201ENST00000304778 ADAMTS13Q76LX8 1427 aa20.7■□□□□ 0.9
LONRF3-201ENST00000304778 KNDC1Q76NI1 1749 aa20.7■□□□□ 0.9
LONRF3-201ENST00000304778 PPIP5K1Q6PFW1 1433 aa20.68■□□□□ 0.9
LONRF3-201ENST00000304778 C3P01024 1663 aa20.68■□□□□ 0.9
LONRF3-201ENST00000304778 CPS1P31327 1500 aa20.68■□□□□ 0.9
LONRF3-201ENST00000304778 KIF20BQ96Q89 1820 aa20.68■□□□□ 0.9
LONRF3-201ENST00000304778 NUDT16Q96DE0 195 aaKnown RBP20.67■□□□□ 0.9
LONRF3-201ENST00000304778 PLEKHG1Q9ULL1 1385 aa20.67■□□□□ 0.9
LONRF3-201ENST00000304778 COL3A1P02461 1466 aaPredicted RBP20.67■□□□□ 0.9
LONRF3-201ENST00000304778 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
LONRF3-201ENST00000304778 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
LONRF3-201ENST00000304778 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
LONRF3-201ENST00000304778 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
LONRF3-201ENST00000304778 IGHDP01880 384 aa20.65■□□□□ 0.9
LONRF3-201ENST00000304778 CPSF1Q10570 1443 aaKnown RBP20.65■□□□□ 0.9
LONRF3-201ENST00000304778 CANXP27824 592 aaKnown RBP20.65■□□□□ 0.9
LONRF3-201ENST00000304778 CLUAP1Q96AJ1 413 aa20.65■□□□□ 0.9
LONRF3-201ENST00000304778 SLC26A8Q96RN1 970 aa20.64■□□□□ 0.89
LONRF3-201ENST00000304778 FBLN1P23142 703 aa20.64■□□□□ 0.89
LONRF3-201ENST00000304778 EID1Q9Y6B2 187 aa20.64■□□□□ 0.89
LONRF3-201ENST00000304778 FER1L4A9Z1Z3 1794 aa20.64■□□□□ 0.89
LONRF3-201ENST00000304778 CCDC61Q9Y6R9 512 aa20.63■□□□□ 0.89
LONRF3-201ENST00000304778 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
LONRF3-201ENST00000304778 GLIPR1L2Q4G1C9 344 aa20.62■□□□□ 0.89
LONRF3-201ENST00000304778 WDR63Q8IWG1 891 aa20.62■□□□□ 0.89
LONRF3-201ENST00000304778 PANK1Q8TE04 598 aa20.62■□□□□ 0.89
LONRF3-201ENST00000304778 COG6Q9Y2V7 657 aa20.62■□□□□ 0.89
LONRF3-201ENST00000304778 EDC4Q6P2E9 1401 aaKnown RBP20.61■□□□□ 0.89
LONRF3-201ENST00000304778 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
LONRF3-201ENST00000304778 PNPLA6Q8IY17 1366 aa20.61■□□□□ 0.89
LONRF3-201ENST00000304778 DIAPH1O60610 1272 aaKnown RBP20.61■□□□□ 0.89
LONRF3-201ENST00000304778 PRR36Q9H6K5 1346 aa20.61■□□□□ 0.89
LONRF3-201ENST00000304778 NME9Q86XW9 330 aa20.61■□□□□ 0.89
LONRF3-201ENST00000304778 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
LONRF3-201ENST00000304778 RARSP54136 660 aaKnown RBP20.6■□□□□ 0.89
LONRF3-201ENST00000304778 ADGRB2O60241 1585 aa20.6■□□□□ 0.89
LONRF3-201ENST00000304778 ARXQ96QS3 562 aa20.6■□□□□ 0.89
LONRF3-201ENST00000304778 POLKQ9UBT6 870 aa20.6■□□□□ 0.89
LONRF3-201ENST00000304778 ZRANB1Q9UGI0 708 aa20.59■□□□□ 0.89
LONRF3-201ENST00000304778 PTPRUQ92729 1446 aa20.59■□□□□ 0.89
LONRF3-201ENST00000304778 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
LONRF3-201ENST00000304778 SLIT1O75093 1534 aa20.59■□□□□ 0.89
LONRF3-201ENST00000304778 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
LONRF3-201ENST00000304778 ARHGAP23Q9P227 1491 aa20.59■□□□□ 0.89
LONRF3-201ENST00000304778 AAMPQ13685 434 aa20.58■□□□□ 0.89
LONRF3-201ENST00000304778 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
LONRF3-201ENST00000304778 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.88
LONRF3-201ENST00000304778 ZMYND15Q9H091 742 aa20.57■□□□□ 0.88
LONRF3-201ENST00000304778 THEMISQ8N1K5 641 aaPredicted RBP20.56■□□□□ 0.88
LONRF3-201ENST00000304778 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
LONRF3-201ENST00000304778 SEC24BO95487 1268 aa20.56■□□□□ 0.88
LONRF3-201ENST00000304778 TMPOP42166 694 aaKnown RBP20.55■□□□□ 0.88
LONRF3-201ENST00000304778 AMOTL2Q9Y2J4 779 aa20.55■□□□□ 0.88
LONRF3-201ENST00000304778 NUTM2FA1L443 756 aa20.55■□□□□ 0.88
LONRF3-201ENST00000304778 MON2Q7Z3U7 1717 aa20.54■□□□□ 0.88
LONRF3-201ENST00000304778 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
LONRF3-201ENST00000304778 ZNF692Q9BU19 519 aaPredicted RBP20.54■□□□□ 0.88
LONRF3-201ENST00000304778 TBX22Q9Y458 520 aa20.54■□□□□ 0.88
LONRF3-201ENST00000304778 EMILIN1Q9Y6C2 1016 aa20.54■□□□□ 0.88
LONRF3-201ENST00000304778 USP19O94966 1318 aa20.53■□□□□ 0.88
LONRF3-201ENST00000304778 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
LONRF3-201ENST00000304778 COG3Q96JB2 828 aa20.52■□□□□ 0.88
LONRF3-201ENST00000304778 TRIM35Q9UPQ4 493 aa20.52■□□□□ 0.88
LONRF3-201ENST00000304778 AKAP12Q02952 1782 aa20.52■□□□□ 0.88
LONRF3-201ENST00000304778 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
LONRF3-201ENST00000304778 MYH16Q9H6N6 1097 aa20.52■□□□□ 0.88
LONRF3-201ENST00000304778 RLBP1P12271 317 aa20.52■□□□□ 0.87
LONRF3-201ENST00000304778 ITSN1Q15811 1721 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms