RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 STK26Q9P289 416 aa23.62■■□□□ 1.37
TRABD-201ENST00000303434 PDE3AQ14432 1141 aa23.61■■□□□ 1.37
TRABD-201ENST00000303434 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
TRABD-201ENST00000303434 IQSEC2Q5JU85 1478 aa23.61■■□□□ 1.37
TRABD-201ENST00000303434 USP19O94966 1318 aa23.61■■□□□ 1.37
TRABD-201ENST00000303434 PDE4CQ08493 712 aa23.61■■□□□ 1.37
TRABD-201ENST00000303434 SLKQ9H2G2 1235 aaPredicted RBP23.6■■□□□ 1.37
TRABD-201ENST00000303434 ISY1Q9ULR0 285 aaKnown RBP23.6■■□□□ 1.37
TRABD-201ENST00000303434 ERBB4Q15303 1308 aa23.6■■□□□ 1.37
TRABD-201ENST00000303434 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
TRABD-201ENST00000303434 MAP7D2Q96T17 732 aa23.6■■□□□ 1.37
TRABD-201ENST00000303434 SENP3Q9H4L4 574 aaPredicted RBP23.6■■□□□ 1.37
TRABD-201ENST00000303434 WDR63Q8IWG1 891 aa23.59■■□□□ 1.37
TRABD-201ENST00000303434 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
TRABD-201ENST00000303434 CCDC27Q2M243 656 aa23.57■■□□□ 1.36
TRABD-201ENST00000303434 SRPK2P78362 688 aaKnown RBP23.56■■□□□ 1.36
TRABD-201ENST00000303434 NINLQ9Y2I6 1382 aa23.56■■□□□ 1.36
TRABD-201ENST00000303434 VIRMAQ69YN4 1812 aaKnown RBP23.55■■□□□ 1.36
TRABD-201ENST00000303434 CANXP27824 592 aaKnown RBP23.55■■□□□ 1.36
TRABD-201ENST00000303434 A0A1W2PP64 1363 aa23.55■■□□□ 1.36
TRABD-201ENST00000303434 MCM4P33991 863 aa23.55■■□□□ 1.36
TRABD-201ENST00000303434 TRIM44Q96DX7 344 aaPredicted RBP23.55■■□□□ 1.36
TRABD-201ENST00000303434 U2AF1L5P0DN76 240 aaPredicted RBP23.54■■□□□ 1.36
TRABD-201ENST00000303434 RARSP54136 660 aaKnown RBP23.54■■□□□ 1.36
TRABD-201ENST00000303434 U2AF1Q01081 240 aaKnown RBP eCLIP23.54■■□□□ 1.36
TRABD-201ENST00000303434 GRPEL1Q9HAV7 217 aa23.54■■□□□ 1.36
TRABD-201ENST00000303434 KIAA1211Q6ZU35 1233 aa23.54■■□□□ 1.36
TRABD-201ENST00000303434 PANK1Q8TE04 598 aa23.54■■□□□ 1.36
TRABD-201ENST00000303434 ABCC11Q96J66 1382 aa23.53■■□□□ 1.36
TRABD-201ENST00000303434 TERF1P54274 439 aa23.53■■□□□ 1.36
TRABD-201ENST00000303434 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
TRABD-201ENST00000303434 FBXO31Q5XUX0 539 aaPredicted RBP23.53■■□□□ 1.36
TRABD-201ENST00000303434 PTPRMP28827 1452 aa23.53■■□□□ 1.36
TRABD-201ENST00000303434 IGHDP01880 384 aa23.53■■□□□ 1.36
TRABD-201ENST00000303434 COG6Q9Y2V7 657 aa23.53■■□□□ 1.36
TRABD-201ENST00000303434 SMAP1Q8IYB5 467 aaPredicted RBP23.52■■□□□ 1.36
TRABD-201ENST00000303434 PRAM1Q96QH2 718 aa23.52■■□□□ 1.36
TRABD-201ENST00000303434 GZF1Q9H116 711 aaPredicted RBP23.52■■□□□ 1.36
TRABD-201ENST00000303434 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
TRABD-201ENST00000303434 CLUAP1Q96AJ1 413 aa23.51■■□□□ 1.35
TRABD-201ENST00000303434 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
TRABD-201ENST00000303434 GGNBP2Q9H3C7 697 aa23.5■■□□□ 1.35
TRABD-201ENST00000303434 ATAD2Q6PL18 1390 aa23.49■■□□□ 1.35
TRABD-201ENST00000303434 TRAK2O60296 914 aa23.49■■□□□ 1.35
TRABD-201ENST00000303434 TERF2IPQ9NYB0 399 aa23.49■■□□□ 1.35
TRABD-201ENST00000303434 FYB1O15117 783 aa23.47■■□□□ 1.35
TRABD-201ENST00000303434 CLTCQ00610 1675 aaKnown RBP23.46■■□□□ 1.35
TRABD-201ENST00000303434 ADGRB2O60241 1585 aa23.45■■□□□ 1.34
TRABD-201ENST00000303434 CD163L1Q9NR16 1453 aa23.45■■□□□ 1.34
TRABD-201ENST00000303434 ALKQ9UM73 1620 aa23.45■■□□□ 1.34
TRABD-201ENST00000303434 TRHP20396 242 aaPredicted RBP23.45■■□□□ 1.34
TRABD-201ENST00000303434 STAG3Q9UJ98 1225 aa23.44■■□□□ 1.34
TRABD-201ENST00000303434 OFD1O75665 1012 aa23.44■■□□□ 1.34
TRABD-201ENST00000303434 RIPK4P57078 832 aa23.44■■□□□ 1.34
TRABD-201ENST00000303434 U2SURPO15042 1029 aaKnown RBP23.43■■□□□ 1.34
TRABD-201ENST00000303434 PLEKHF1Q96S99 279 aa23.43■■□□□ 1.34
TRABD-201ENST00000303434 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
TRABD-201ENST00000303434 CDK19Q9BWU1 502 aa23.43■■□□□ 1.34
TRABD-201ENST00000303434 BCL2L13Q9BXK5 485 aa23.43■■□□□ 1.34
TRABD-201ENST00000303434 RLBP1P12271 317 aa23.42■■□□□ 1.34
TRABD-201ENST00000303434 MED14O60244 1454 aa23.42■■□□□ 1.34
TRABD-201ENST00000303434 NLRP1Q9C000 1473 aa23.42■■□□□ 1.34
TRABD-201ENST00000303434 TNNQ9UQP3 1299 aa23.42■■□□□ 1.34
TRABD-201ENST00000303434 COL3A1P02461 1466 aaPredicted RBP23.41■■□□□ 1.34
TRABD-201ENST00000303434 MTERF4Q7Z6M4 381 aaKnown RBP23.41■■□□□ 1.34
TRABD-201ENST00000303434 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.4■■□□□ 1.34
TRABD-201ENST00000303434 HDGFL2Q7Z4V5 671 aaPredicted RBP23.4■■□□□ 1.34
TRABD-201ENST00000303434 SEC24BO95487 1268 aa23.39■■□□□ 1.33
TRABD-201ENST00000303434 TMPOP42166 694 aaKnown RBP23.39■■□□□ 1.33
TRABD-201ENST00000303434 TBC1D2Q9BYX2 928 aa23.39■■□□□ 1.33
TRABD-201ENST00000303434 CABP1Q9NZU7 370 aa23.39■■□□□ 1.33
TRABD-201ENST00000303434 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.33
TRABD-201ENST00000303434 ARHGEF40Q8TER5 1519 aa23.39■■□□□ 1.33
TRABD-201ENST00000303434 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
TRABD-201ENST00000303434 TRIM35Q9UPQ4 493 aa23.37■■□□□ 1.33
TRABD-201ENST00000303434 PCDHB15Q9Y5E8 787 aa23.37■■□□□ 1.33
TRABD-201ENST00000303434 CHMP5Q9NZZ3 219 aa23.37■■□□□ 1.33
TRABD-201ENST00000303434 MAPK8IP3Q9UPT6 1336 aa23.37■■□□□ 1.33
TRABD-201ENST00000303434 DDX11L8A8MPP1 907 aa23.36■■□□□ 1.33
TRABD-201ENST00000303434 CT47B1P0C2W7 299 aaPredicted RBP23.36■■□□□ 1.33
TRABD-201ENST00000303434 UTP14CQ5TAP6 766 aaKnown RBP23.36■■□□□ 1.33
TRABD-201ENST00000303434 TSR2Q969E8 191 aaKnown RBP23.36■■□□□ 1.33
TRABD-201ENST00000303434 UPF2Q9HAU5 1272 aaKnown RBP23.35■■□□□ 1.33
TRABD-201ENST00000303434 REREQ9P2R6 1566 aa23.35■■□□□ 1.33
TRABD-201ENST00000303434 AGLP35573 1532 aa23.35■■□□□ 1.33
TRABD-201ENST00000303434 ZSCAN30Q86W11 494 aa23.34■■□□□ 1.33
TRABD-201ENST00000303434 DIAPH1O60610 1272 aaKnown RBP23.34■■□□□ 1.33
TRABD-201ENST00000303434 NCLP19338 710 aaKnown RBP23.34■■□□□ 1.33
TRABD-201ENST00000303434 FAM13BQ9NYF5 915 aa23.34■■□□□ 1.33
TRABD-201ENST00000303434 PNPLA6Q8IY17 1366 aa23.34■■□□□ 1.33
TRABD-201ENST00000303434 A2ML1A8K2U0 1454 aa23.33■■□□□ 1.33
TRABD-201ENST00000303434 EXOSC9Q06265 439 aaKnown RBP23.33■■□□□ 1.33
TRABD-201ENST00000303434 ZKSCAN2Q63HK3 967 aa23.33■■□□□ 1.33
TRABD-201ENST00000303434 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
TRABD-201ENST00000303434 TBC1D32Q96NH3 1257 aa23.33■■□□□ 1.33
TRABD-201ENST00000303434 KIF20BQ96Q89 1820 aa23.32■■□□□ 1.32
TRABD-201ENST00000303434 CCDC173Q0VFZ6 552 aa23.31■■□□□ 1.32
TRABD-201ENST00000303434 MVPQ14764 893 aaKnown RBP23.31■■□□□ 1.32
TRABD-201ENST00000303434 DLC1Q96QB1 1528 aa23.3■■□□□ 1.32
TRABD-201ENST00000303434 RIMS2Q9UQ26 1411 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms