RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TANGO6Q9C0B7 1094 aa14.77□□□□□ -0.04
ABCA3-201ENST00000301732 EID1Q9Y6B2 187 aa14.77□□□□□ -0.04
ABCA3-201ENST00000301732 NAT10Q9H0A0 1025 aaKnown RBP14.77□□□□□ -0.04
ABCA3-201ENST00000301732 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC66A2RUB6 948 aa14.77□□□□□ -0.05
ABCA3-201ENST00000301732 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
ABCA3-201ENST00000301732 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
ABCA3-201ENST00000301732 TICAM2Q86XR7 235 aa14.76□□□□□ -0.05
ABCA3-201ENST00000301732 PPFIA3O75145 1194 aa14.75□□□□□ -0.05
ABCA3-201ENST00000301732 ME1P48163 572 aa14.75□□□□□ -0.05
ABCA3-201ENST00000301732 NOB1Q9ULX3 412 aaKnown RBP14.75□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC85AQ96PX6 553 aaPredicted RBP14.75□□□□□ -0.05
ABCA3-201ENST00000301732 TNNT1P13805 278 aa14.75□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC88BA6NC98 1476 aa14.75□□□□□ -0.05
ABCA3-201ENST00000301732 TDRD9Q8NDG6 1382 aaKnown RBP14.75□□□□□ -0.05
ABCA3-201ENST00000301732 POLR3GO15318 223 aaPredicted RBP14.75□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC173Q0VFZ6 552 aa14.75□□□□□ -0.05
ABCA3-201ENST00000301732 IPO4Q8TEX9 1081 aaKnown RBP14.75□□□□□ -0.05
ABCA3-201ENST00000301732 STK38Q15208 465 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
ABCA3-201ENST00000301732 TNMDQ9H2S6 317 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 SYCE3A1L190 88 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 GPATCH11Q8N954 259 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
ABCA3-201ENST00000301732 XPCQ01831 940 aaPredicted RBP14.74□□□□□ -0.05
ABCA3-201ENST00000301732 EXOSC9Q06265 439 aaKnown RBP14.74□□□□□ -0.05
ABCA3-201ENST00000301732 DCTN1Q14203 1278 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC112Q8NEF3 446 aa14.74□□□□□ -0.05
ABCA3-201ENST00000301732 API5Q9BZZ5 524 aaKnown RBP14.74□□□□□ -0.05
ABCA3-201ENST00000301732 NUP133Q8WUM0 1156 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 RUNDC1Q96C34 613 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 RBM33Q96EV2 1170 aaKnown RBP14.73□□□□□ -0.05
ABCA3-201ENST00000301732 DDX11Q96FC9 970 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 DEF6Q9H4E7 631 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 PSME1Q06323 249 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 PHLDB1Q86UU1 1377 aa14.73□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC181Q5TID7 509 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 MAGEC2Q9UBF1 373 aaPredicted RBP14.72□□□□□ -0.05
ABCA3-201ENST00000301732 ERC2O15083 957 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 CNTROBQ8N137 903 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 CDK5RAP3Q96JB5 506 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 FERMT3Q86UX7 667 aa14.72□□□□□ -0.05
ABCA3-201ENST00000301732 KIF7Q2M1P5 1343 aa14.71□□□□□ -0.05
ABCA3-201ENST00000301732 KIAA0754O94854 1291 aa14.71□□□□□ -0.05
ABCA3-201ENST00000301732 SSBP05455 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
ABCA3-201ENST00000301732 EFCAB2Q5VUJ9 269 aa14.71□□□□□ -0.05
ABCA3-201ENST00000301732 PPP1R1BQ9UD71 204 aaPredicted RBP14.71□□□□□ -0.05
ABCA3-201ENST00000301732 CCDC113Q9H0I3 377 aa14.71□□□□□ -0.06
ABCA3-201ENST00000301732 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
ABCA3-201ENST00000301732 CGNQ9P2M7 1197 aaKnown RBP14.7□□□□□ -0.06
ABCA3-201ENST00000301732 SEPT7Q16181 437 aaKnown RBP14.7□□□□□ -0.06
ABCA3-201ENST00000301732 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
ABCA3-201ENST00000301732 DDX58O95786 925 aaKnown RBP14.7□□□□□ -0.06
ABCA3-201ENST00000301732 TRMT1Q9NXH9 659 aaKnown RBP14.7□□□□□ -0.06
ABCA3-201ENST00000301732 MTHFSP49914 203 aa14.7□□□□□ -0.06
ABCA3-201ENST00000301732 LRRFIP1Q32MZ4 808 aaKnown RBP14.69□□□□□ -0.06
ABCA3-201ENST00000301732 IL1RAPL2Q9NP60 686 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 NLRP2Q9NX02 1062 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 SERPINA10Q9UK55 444 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 BRMS1Q9HCU9 246 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 CWC27Q6UX04 472 aaKnown RBP14.69□□□□□ -0.06
ABCA3-201ENST00000301732 ERCC4Q92889 916 aaPredicted RBP14.69□□□□□ -0.06
ABCA3-201ENST00000301732 MYL6BP14649 208 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 DHX8Q14562 1220 aaKnown RBP14.69□□□□□ -0.06
ABCA3-201ENST00000301732 FILIP1LQ4L180 1135 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 TTC16Q8NEE8 873 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 PDCL3Q9H2J4 239 aa14.69□□□□□ -0.06
ABCA3-201ENST00000301732 SMARCE1Q969G3 411 aa14.68□□□□□ -0.06
ABCA3-201ENST00000301732 SSR1P43307 286 aaKnown RBP14.68□□□□□ -0.06
ABCA3-201ENST00000301732 GUCY1B3Q02153 619 aa14.68□□□□□ -0.06
ABCA3-201ENST00000301732 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
ABCA3-201ENST00000301732 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
ABCA3-201ENST00000301732 PPFIBP1Q86W92 1011 aa14.67□□□□□ -0.06
ABCA3-201ENST00000301732 GOLGA6L10A0A0M3HER8 536 aa14.67□□□□□ -0.06
ABCA3-201ENST00000301732 GOLGA6L10A6NI86 522 aa14.67□□□□□ -0.06
ABCA3-201ENST00000301732 SYCP1Q15431 976 aa14.67□□□□□ -0.06
ABCA3-201ENST00000301732 TRMT1LQ7Z2T5 733 aaKnown RBP14.67□□□□□ -0.06
ABCA3-201ENST00000301732 ESPNB1AK53 854 aa14.66□□□□□ -0.06
ABCA3-201ENST00000301732 BCCIPQ9P287 314 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCA3-201ENST00000301732 FKBP4Q02790 459 aaKnown RBP eCLIP14.66□□□□□ -0.06
ABCA3-201ENST00000301732 LARP1BQ659C4 914 aaKnown RBP14.66□□□□□ -0.06
ABCA3-201ENST00000301732 PDCL2Q8N4E4 241 aa14.66□□□□□ -0.06
ABCA3-201ENST00000301732 GDPD2Q9HCC8 539 aa14.66□□□□□ -0.06
ABCA3-201ENST00000301732 ISM2Q6H9L7 571 aa14.66□□□□□ -0.06
ABCA3-201ENST00000301732 SMARCA5O60264 1052 aaPredicted RBP14.66□□□□□ -0.06
ABCA3-201ENST00000301732 PSMA5P28066 241 aa14.66□□□□□ -0.06
ABCA3-201ENST00000301732 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 CCDC192P0DO97 292 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 CCAR1Q8IX12 1150 aaKnown RBP14.65□□□□□ -0.06
ABCA3-201ENST00000301732 CLASRPQ8N2M8 674 aaKnown RBP14.65□□□□□ -0.06
ABCA3-201ENST00000301732 CHMP4BP1P59074 171 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 MIS18AQ9NYP9 233 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 KLHL10Q6JEL2 608 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.06
ABCA3-201ENST00000301732 LRRCC1Q9C099 1032 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 SLC4A2P04920 1241 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
ABCA3-201ENST00000301732 ZNF644Q9H582 1327 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms