RNA–Protein interactions for RNA: ENST00000298231.5

PHOX2A-201, Transcript of paired like homeobox 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHOX2A, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2A-201ENST00000298231 TRMT2AQ8IZ69 625 aaKnown RBP34.71■■■■□ 3.15
PHOX2A-201ENST00000298231 FBXO41Q8TF61 875 aa34.71■■■■□ 3.15
PHOX2A-201ENST00000298231 APAF1O14727 1248 aa34.7■■■■□ 3.14
PHOX2A-201ENST00000298231 CCDC146Q8IYE0 955 aa34.7■■■■□ 3.14
PHOX2A-201ENST00000298231 MTHFSP49914 203 aa34.68■■■■□ 3.14
PHOX2A-201ENST00000298231 NCOA3Q9Y6Q9 1424 aa34.67■■■■□ 3.14
PHOX2A-201ENST00000298231 E9PSI1 815 aa34.66■■■■□ 3.14
PHOX2A-201ENST00000298231 RUNDC1Q96C34 613 aa34.66■■■■□ 3.14
PHOX2A-201ENST00000298231 ADGRB2O60241 1585 aa34.66■■■■□ 3.14
PHOX2A-201ENST00000298231 PTCH1Q13635 1447 aa34.65■■■■□ 3.14
PHOX2A-201ENST00000298231 COL3A1P02461 1466 aaPredicted RBP34.64■■■■□ 3.14
PHOX2A-201ENST00000298231 TNNT2P45379 298 aaPredicted RBP34.62■■■■□ 3.13
PHOX2A-201ENST00000298231 RBM33Q96EV2 1170 aaKnown RBP34.61■■■■□ 3.13
PHOX2A-201ENST00000298231 RBM19Q9Y4C8 960 aaKnown RBP34.61■■■■□ 3.13
PHOX2A-201ENST00000298231 CDC42BPGQ6DT37 1551 aa34.6■■■■□ 3.13
PHOX2A-201ENST00000298231 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.59■■■■□ 3.13
PHOX2A-201ENST00000298231 FYB1O15117 783 aa34.58■■■■□ 3.13
PHOX2A-201ENST00000298231 CPSF1Q10570 1443 aaKnown RBP34.58■■■■□ 3.13
PHOX2A-201ENST00000298231 UBAP1LF5GYI3 381 aa34.57■■■■□ 3.13
PHOX2A-201ENST00000298231 WASLO00401 505 aaPredicted RBP34.57■■■■□ 3.13
PHOX2A-201ENST00000298231 CCDC27Q2M243 656 aa34.57■■■■□ 3.13
PHOX2A-201ENST00000298231 EDC4Q6P2E9 1401 aaKnown RBP34.57■■■■□ 3.12
PHOX2A-201ENST00000298231 MON2Q7Z3U7 1717 aa34.57■■■■□ 3.12
PHOX2A-201ENST00000298231 WAPLQ7Z5K2 1190 aa34.57■■■■□ 3.12
PHOX2A-201ENST00000298231 EXOC6Q8TAG9 804 aa34.57■■■■□ 3.12
PHOX2A-201ENST00000298231 PHF23Q9BUL5 403 aaPredicted RBP34.57■■■■□ 3.12
PHOX2A-201ENST00000298231 ROBO2Q9HCK4 1378 aa34.56■■■■□ 3.12
PHOX2A-201ENST00000298231 CABP1Q9NZU7 370 aa34.56■■■■□ 3.12
PHOX2A-201ENST00000298231 MSH6P52701 1360 aa34.54■■■■□ 3.12
PHOX2A-201ENST00000298231 TOM1O60784 492 aa34.54■■■■□ 3.12
PHOX2A-201ENST00000298231 WWC1Q8IX03 1113 aa34.53■■■■□ 3.12
PHOX2A-201ENST00000298231 GGNBP2Q9H3C7 697 aa34.53■■■■□ 3.12
PHOX2A-201ENST00000298231 PPIP5K1Q6PFW1 1433 aa34.52■■■■□ 3.12
PHOX2A-201ENST00000298231 AKAP12Q02952 1782 aa34.52■■■■□ 3.12
PHOX2A-201ENST00000298231 ITSN1Q15811 1721 aa34.52■■■■□ 3.12
PHOX2A-201ENST00000298231 PNPLA6Q8IY17 1366 aa34.52■■■■□ 3.12
PHOX2A-201ENST00000298231 WDR63Q8IWG1 891 aa34.5■■■■□ 3.11
PHOX2A-201ENST00000298231 C19orf44Q9H6X5 657 aa34.48■■■■□ 3.11
PHOX2A-201ENST00000298231 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.48■■■■□ 3.11
PHOX2A-201ENST00000298231 ADGRL3Q9HAR2 1447 aa34.48■■■■□ 3.11
PHOX2A-201ENST00000298231 TOPAZ1Q8N9V7 1692 aa34.48■■■■□ 3.11
PHOX2A-201ENST00000298231 C14orf37Q86TY3 774 aa34.47■■■■□ 3.11
PHOX2A-201ENST00000298231 TCP11L2Q8N4U5 519 aa34.47■■■■□ 3.11
PHOX2A-201ENST00000298231 DCCP43146 1447 aa34.46■■■■□ 3.11
PHOX2A-201ENST00000298231 NALCNQ8IZF0 1738 aa34.46■■■■□ 3.11
PHOX2A-201ENST00000298231 U2AF1L5P0DN76 240 aaPredicted RBP34.44■■■■□ 3.1
PHOX2A-201ENST00000298231 U2AF1Q01081 240 aaKnown RBP eCLIP34.44■■■■□ 3.1
PHOX2A-201ENST00000298231 SPINK5Q9NQ38 1064 aaPredicted RBP34.43■■■■□ 3.1
PHOX2A-201ENST00000298231 PNNQ9H307 717 aaKnown RBP34.41■■■■□ 3.1
PHOX2A-201ENST00000298231 CCDC61Q9Y6R9 512 aa34.41■■■■□ 3.1
PHOX2A-201ENST00000298231 PLIN1O60240 522 aa34.41■■■■□ 3.1
PHOX2A-201ENST00000298231 CRBNQ96SW2 442 aa34.41■■■■□ 3.1
PHOX2A-201ENST00000298231 AATKQ6ZMQ8 1374 aa34.4■■■■□ 3.1
PHOX2A-201ENST00000298231 CADPS2Q86UW7 1296 aa34.39■■■■□ 3.1
PHOX2A-201ENST00000298231 NUDT16Q96DE0 195 aaKnown RBP34.39■■■■□ 3.1
PHOX2A-201ENST00000298231 FANCIQ9NVI1 1328 aa34.38■■■■□ 3.09
PHOX2A-201ENST00000298231 CDK12Q9NYV4 1490 aaPredicted RBP34.38■■■■□ 3.09
PHOX2A-201ENST00000298231 NRKQ7Z2Y5 1582 aa34.37■■■■□ 3.09
PHOX2A-201ENST00000298231 PIP4K2BP78356 416 aa34.37■■■■□ 3.09
PHOX2A-201ENST00000298231 ATF3P18847 181 aa34.36■■■■□ 3.09
PHOX2A-201ENST00000298231 DIAPH1O60610 1272 aaKnown RBP34.35■■■■□ 3.09
PHOX2A-201ENST00000298231 ZNF692Q9BU19 519 aaPredicted RBP34.35■■■■□ 3.09
PHOX2A-201ENST00000298231 PLEKHF1Q96S99 279 aa34.33■■■■□ 3.09
PHOX2A-201ENST00000298231 MYH16Q9H6N6 1097 aa34.32■■■■□ 3.08
PHOX2A-201ENST00000298231 SLAIN2Q9P270 581 aa34.32■■■■□ 3.08
PHOX2A-201ENST00000298231 MAPK8IP3Q9UPT6 1336 aa34.32■■■■□ 3.08
PHOX2A-201ENST00000298231 MAP2P11137 1827 aaKnown RBP34.3■■■■□ 3.08
PHOX2A-201ENST00000298231 MST1RQ04912 1400 aa34.29■■■■□ 3.08
PHOX2A-201ENST00000298231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.28■■■■□ 3.08
PHOX2A-201ENST00000298231 RRP7AQ9Y3A4 280 aaKnown RBP34.28■■■■□ 3.08
PHOX2A-201ENST00000298231 U2SURPO15042 1029 aaKnown RBP34.28■■■■□ 3.08
PHOX2A-201ENST00000298231 CT47B1P0C2W7 299 aaPredicted RBP34.28■■■■□ 3.08
PHOX2A-201ENST00000298231 IL16Q14005 1332 aa34.27■■■■□ 3.08
PHOX2A-201ENST00000298231 PRR36Q9H6K5 1346 aa34.27■■■■□ 3.08
PHOX2A-201ENST00000298231 PDE3AQ14432 1141 aa34.27■■■■□ 3.08
PHOX2A-201ENST00000298231 C20orf194Q5TEA3 1177 aa34.27■■■■□ 3.08
PHOX2A-201ENST00000298231 ROBO1Q9Y6N7 1651 aa34.27■■■■□ 3.08
PHOX2A-201ENST00000298231 TCERG1O14776 1098 aaKnown RBP34.26■■■■□ 3.08
PHOX2A-201ENST00000298231 POLKQ9UBT6 870 aa34.25■■■■□ 3.07
PHOX2A-201ENST00000298231 FCHSD2O94868 740 aa34.25■■■■□ 3.07
PHOX2A-201ENST00000298231 NEUROD2Q15784 382 aa34.25■■■■□ 3.07
PHOX2A-201ENST00000298231 PLEKHG3A1L390 1219 aa34.23■■■■□ 3.07
PHOX2A-201ENST00000298231 TMPOP42166 694 aaKnown RBP34.22■■■■□ 3.07
PHOX2A-201ENST00000298231 COG3Q96JB2 828 aa34.22■■■■□ 3.07
PHOX2A-201ENST00000298231 MS4A1P11836 297 aa34.2■■■■□ 3.07
PHOX2A-201ENST00000298231 NME9Q86XW9 330 aa34.19■■■■□ 3.06
PHOX2A-201ENST00000298231 CENPQQ7L2Z9 268 aaPredicted RBP34.19■■■■□ 3.06
PHOX2A-201ENST00000298231 KDM2BQ8NHM5 1336 aa34.18■■■■□ 3.06
PHOX2A-201ENST00000298231 C1orf167Q5SNV9 1468 aa34.18■■■■□ 3.06
PHOX2A-201ENST00000298231 BCAR3O75815 825 aa34.18■■■■□ 3.06
PHOX2A-201ENST00000298231 AAMPQ13685 434 aa34.18■■■■□ 3.06
PHOX2A-201ENST00000298231 USP6P35125 1406 aa34.18■■■■□ 3.06
PHOX2A-201ENST00000298231 FMN2Q9NZ56 1722 aa34.17■■■■□ 3.06
PHOX2A-201ENST00000298231 OVOS2A0A0J9YW53 1432 aa34.16■■■■□ 3.06
PHOX2A-201ENST00000298231 OVOS2Q6IE36 1432 aa34.16■■■■□ 3.06
PHOX2A-201ENST00000298231 NEFMP07197 916 aa34.15■■■■□ 3.06
PHOX2A-201ENST00000298231 RARSP54136 660 aaKnown RBP34.15■■■■□ 3.06
PHOX2A-201ENST00000298231 HSPA1LP34931 641 aa34.15■■■■□ 3.06
PHOX2A-201ENST00000298231 ANKARQ7Z5J8 1434 aa34.14■■■■□ 3.06
PHOX2A-201ENST00000298231 RSPH6AQ9H0K4 717 aa34.14■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms