RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 KINO60870 393 aaKnown RBP17.03■□□□□ 0.32
COL1A2-201ENST00000297268 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
COL1A2-201ENST00000297268 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
COL1A2-201ENST00000297268 EHBP1L1Q8N3D4 1523 aa17.02■□□□□ 0.32
COL1A2-201ENST00000297268 SMC2O95347 1197 aa17.02■□□□□ 0.32
COL1A2-201ENST00000297268 CLASRPQ8N2M8 674 aaKnown RBP17.02■□□□□ 0.32
COL1A2-201ENST00000297268 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.31
COL1A2-201ENST00000297268 ZSCAN30Q86W11 494 aa17.02■□□□□ 0.31
COL1A2-201ENST00000297268 C11orf95C9JLR9 678 aaPredicted RBP17.02■□□□□ 0.31
COL1A2-201ENST00000297268 RUFY1Q96T51 708 aa17.02■□□□□ 0.31
COL1A2-201ENST00000297268 PATL2C9JE40 543 aaKnown RBP17.01■□□□□ 0.31
COL1A2-201ENST00000297268 CCDC192P0DO97 292 aa17.01■□□□□ 0.31
COL1A2-201ENST00000297268 GTF2E1P29083 439 aaPredicted RBP17.01■□□□□ 0.31
COL1A2-201ENST00000297268 SAFBQ15424 915 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL1A2-201ENST00000297268 AK7Q96M32 723 aa17.01■□□□□ 0.31
COL1A2-201ENST00000297268 RALYLQ86SE5 291 aaKnown RBP17.01■□□□□ 0.31
COL1A2-201ENST00000297268 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
COL1A2-201ENST00000297268 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
COL1A2-201ENST00000297268 GNAI2P04899 355 aa17■□□□□ 0.31
COL1A2-201ENST00000297268 NEUROD6Q96NK8 337 aa17■□□□□ 0.31
COL1A2-201ENST00000297268 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
COL1A2-201ENST00000297268 CCDC30Q5VVM6 783 aa16.99■□□□□ 0.31
COL1A2-201ENST00000297268 EFCAB5A4FU69 1503 aa16.98■□□□□ 0.31
COL1A2-201ENST00000297268 CCDC112Q8NEF3 446 aa16.98■□□□□ 0.31
COL1A2-201ENST00000297268 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
COL1A2-201ENST00000297268 ERICH2A1L162 156 aa16.98■□□□□ 0.31
COL1A2-201ENST00000297268 RIC3Q7Z5B4 369 aa16.98■□□□□ 0.31
COL1A2-201ENST00000297268 WWC1Q8IX03 1113 aa16.98■□□□□ 0.31
COL1A2-201ENST00000297268 WASHC4Q2M389 1173 aa16.97■□□□□ 0.31
COL1A2-201ENST00000297268 CEBPZQ03701 1054 aaKnown RBP16.97■□□□□ 0.31
COL1A2-201ENST00000297268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL1A2-201ENST00000297268 NAIPQ13075 1403 aa16.97■□□□□ 0.31
COL1A2-201ENST00000297268 CCP110O43303 1012 aa16.97■□□□□ 0.31
COL1A2-201ENST00000297268 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
COL1A2-201ENST00000297268 AEBP1Q8IUX7 1158 aa16.96■□□□□ 0.31
COL1A2-201ENST00000297268 TMX4Q9H1E5 349 aaPredicted RBP16.96■□□□□ 0.31
COL1A2-201ENST00000297268 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
COL1A2-201ENST00000297268 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
COL1A2-201ENST00000297268 CYP46A1Q9Y6A2 500 aa16.95■□□□□ 0.3
COL1A2-201ENST00000297268 C9orf84Q5VXU9 1444 aa16.95■□□□□ 0.3
COL1A2-201ENST00000297268 SYCE3A1L190 88 aa16.95■□□□□ 0.3
COL1A2-201ENST00000297268 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
COL1A2-201ENST00000297268 HIP1O00291 1037 aa16.95■□□□□ 0.3
COL1A2-201ENST00000297268 NAP1L1P55209 391 aaKnown RBP16.95■□□□□ 0.3
COL1A2-201ENST00000297268 ERCC4Q92889 916 aaPredicted RBP16.95■□□□□ 0.3
COL1A2-201ENST00000297268 ZNF396Q96N95 335 aaPredicted RBP16.95■□□□□ 0.3
COL1A2-201ENST00000297268 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
COL1A2-201ENST00000297268 DAPK1P53355 1430 aa16.94■□□□□ 0.3
COL1A2-201ENST00000297268 KRT85P78386 507 aa16.94■□□□□ 0.3
COL1A2-201ENST00000297268 TBC1D2Q9BYX2 928 aa16.94■□□□□ 0.3
COL1A2-201ENST00000297268 TMEM57Q8N5G2 664 aa16.94■□□□□ 0.3
COL1A2-201ENST00000297268 CAGE1Q8TC20 777 aa16.93■□□□□ 0.3
COL1A2-201ENST00000297268 TOP2BQ02880 1626 aa16.93■□□□□ 0.3
COL1A2-201ENST00000297268 KDM4AO75164 1064 aa16.93■□□□□ 0.3
COL1A2-201ENST00000297268 ARHGAP5Q13017 1502 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 G3V3G9 751 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 CCT4P50991 539 aaKnown RBP16.92■□□□□ 0.3
COL1A2-201ENST00000297268 DCAF8Q5TAQ9 597 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
COL1A2-201ENST00000297268 STK38Q15208 465 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 STK3Q13188 491 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 GAS2L2Q8NHY3 880 aa16.92■□□□□ 0.3
COL1A2-201ENST00000297268 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL1A2-201ENST00000297268 MAP4K4O95819 1239 aaPredicted RBP16.91■□□□□ 0.3
COL1A2-201ENST00000297268 LARP1BQ659C4 914 aaKnown RBP16.91■□□□□ 0.3
COL1A2-201ENST00000297268 CDR1P51861 262 aa16.91■□□□□ 0.3
COL1A2-201ENST00000297268 AMOTL1Q8IY63 956 aa16.91■□□□□ 0.3
COL1A2-201ENST00000297268 LEKR1Q6ZMV7 388 aa16.91■□□□□ 0.3
COL1A2-201ENST00000297268 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
COL1A2-201ENST00000297268 PLEKHH2Q8IVE3 1493 aa16.9■□□□□ 0.3
COL1A2-201ENST00000297268 AFAP1Q8N556 730 aa16.9■□□□□ 0.3
COL1A2-201ENST00000297268 H0YHG0 523 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 ANKRD1Q15327 319 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
COL1A2-201ENST00000297268 PSME1Q06323 249 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 PDCL2Q8N4E4 241 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 NKTRP30414 1462 aaKnown RBP16.89■□□□□ 0.29
COL1A2-201ENST00000297268 DHX16O60231 1041 aaKnown RBP16.89■□□□□ 0.29
COL1A2-201ENST00000297268 SERPINC1P01008 464 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 TNPO1Q92973 898 aaKnown RBP16.89■□□□□ 0.29
COL1A2-201ENST00000297268 NUP62CLQ9H1M0 184 aa16.89■□□□□ 0.29
COL1A2-201ENST00000297268 AEBP2Q6ZN18 517 aaPredicted RBP16.88■□□□□ 0.29
COL1A2-201ENST00000297268 NCOA1Q15788 1441 aa16.88■□□□□ 0.29
COL1A2-201ENST00000297268 SUPT6HQ7KZ85 1726 aaKnown RBP16.88■□□□□ 0.29
COL1A2-201ENST00000297268 SRCIN1Q9C0H9 1055 aa16.88■□□□□ 0.29
COL1A2-201ENST00000297268 ME1P48163 572 aa16.88■□□□□ 0.29
COL1A2-201ENST00000297268 NUTM2GQ5VZR2 741 aa16.88■□□□□ 0.29
COL1A2-201ENST00000297268 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
COL1A2-201ENST00000297268 DHX8Q14562 1220 aaKnown RBP16.87■□□□□ 0.29
COL1A2-201ENST00000297268 SPATA32Q96LK8 384 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 NOL10Q9BSC4 688 aaKnown RBP16.87■□□□□ 0.29
COL1A2-201ENST00000297268 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 FILIP1LQ4L180 1135 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 SMARCE1Q969G3 411 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 ATP2B1P20020 1258 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 SSFA2P28290 1259 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 XPCQ01831 940 aaPredicted RBP16.87■□□□□ 0.29
COL1A2-201ENST00000297268 VPS37DQ86XT2 251 aa16.87■□□□□ 0.29
COL1A2-201ENST00000297268 XBP1P17861 261 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms