RNA–Protein interactions for RNA: ENST00000296254.3

TMEM41A-201, Transcript of transmembrane protein 41A, humanhuman

TSL 2 BASIC

Gene TMEM41A, Length 1,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-201ENST00000296254 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
TMEM41A-201ENST00000296254 ITSN1Q15811 1721 aa23.45■■□□□ 1.34
TMEM41A-201ENST00000296254 BTG4Q9NY30 223 aa23.44■■□□□ 1.34
TMEM41A-201ENST00000296254 SF3B2Q13435 895 aaKnown RBP23.43■■□□□ 1.34
TMEM41A-201ENST00000296254 NGDNQ8NEJ9 315 aaKnown RBP23.41■■□□□ 1.34
TMEM41A-201ENST00000296254 A0A0G2JS52 829 aa23.4■■□□□ 1.34
TMEM41A-201ENST00000296254 HRCP23327 699 aa23.4■■□□□ 1.34
TMEM41A-201ENST00000296254 MYT1Q01538 1121 aa23.4■■□□□ 1.34
TMEM41A-201ENST00000296254 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
TMEM41A-201ENST00000296254 THSD7AQ9UPZ6 1657 aa23.38■■□□□ 1.33
TMEM41A-201ENST00000296254 TOPAZ1Q8N9V7 1692 aa23.38■■□□□ 1.33
TMEM41A-201ENST00000296254 PHRF1Q9P1Y6 1649 aaKnown RBP23.37■■□□□ 1.33
TMEM41A-201ENST00000296254 PAK3O75914 559 aaPredicted RBP23.37■■□□□ 1.33
TMEM41A-201ENST00000296254 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
TMEM41A-201ENST00000296254 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
TMEM41A-201ENST00000296254 NUDT16Q96DE0 195 aaKnown RBP23.36■■□□□ 1.33
TMEM41A-201ENST00000296254 PRDM11Q9NQV5 511 aa23.36■■□□□ 1.33
TMEM41A-201ENST00000296254 KIAA1210Q9ULL0 1709 aa23.34■■□□□ 1.33
TMEM41A-201ENST00000296254 LRP5O75197 1615 aa23.33■■□□□ 1.33
TMEM41A-201ENST00000296254 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
TMEM41A-201ENST00000296254 KIAA0232Q92628 1395 aa23.33■■□□□ 1.33
TMEM41A-201ENST00000296254 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.32
TMEM41A-201ENST00000296254 BAG6P46379 1132 aa23.32■■□□□ 1.32
TMEM41A-201ENST00000296254 CDK19Q9BWU1 502 aa23.3■■□□□ 1.32
TMEM41A-201ENST00000296254 DISP2A7MBM2 1401 aa23.29■■□□□ 1.32
TMEM41A-201ENST00000296254 NRKQ7Z2Y5 1582 aa23.29■■□□□ 1.32
TMEM41A-201ENST00000296254 TNS1Q9HBL0 1735 aaKnown RBP23.28■■□□□ 1.32
TMEM41A-201ENST00000296254 SPATA31A1Q5TZJ5 1347 aa23.28■■□□□ 1.32
TMEM41A-201ENST00000296254 CCDC61Q9Y6R9 512 aa23.27■■□□□ 1.32
TMEM41A-201ENST00000296254 ACEP12821 1306 aa23.27■■□□□ 1.32
TMEM41A-201ENST00000296254 CHRNA2Q15822 529 aa23.26■■□□□ 1.31
TMEM41A-201ENST00000296254 FAM182BQ5T319 152 aa23.26■■□□□ 1.31
TMEM41A-201ENST00000296254 PLEKHG3A1L390 1219 aa23.24■■□□□ 1.31
TMEM41A-201ENST00000296254 NBPF8Q3BBV2 869 aa23.24■■□□□ 1.31
TMEM41A-201ENST00000296254 NUTM2GQ5VZR2 741 aa23.24■■□□□ 1.31
TMEM41A-201ENST00000296254 SSH2Q76I76 1423 aa23.24■■□□□ 1.31
TMEM41A-201ENST00000296254 ZC3H6P61129 1189 aaKnown RBP23.23■■□□□ 1.31
TMEM41A-201ENST00000296254 EN1Q05925 392 aaPredicted RBP23.23■■□□□ 1.31
TMEM41A-201ENST00000296254 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
TMEM41A-201ENST00000296254 LMO7Q8WWI1 1683 aa23.22■■□□□ 1.31
TMEM41A-201ENST00000296254 PSDA5PKW4 1024 aaPredicted RBP23.22■■□□□ 1.31
TMEM41A-201ENST00000296254 USP19O94966 1318 aa23.22■■□□□ 1.31
TMEM41A-201ENST00000296254 CPDO75976 1380 aa23.22■■□□□ 1.31
TMEM41A-201ENST00000296254 NBPF1Q3BBV0 1214 aa23.21■■□□□ 1.31
TMEM41A-201ENST00000296254 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
TMEM41A-201ENST00000296254 PPIP5K1Q6PFW1 1433 aa23.19■■□□□ 1.3
TMEM41A-201ENST00000296254 CENPJQ9HC77 1338 aaPredicted RBP23.18■■□□□ 1.3
TMEM41A-201ENST00000296254 ABTB2Q8N961 1025 aa23.18■■□□□ 1.3
TMEM41A-201ENST00000296254 QRICH2Q9H0J4 1663 aa23.17■■□□□ 1.3
TMEM41A-201ENST00000296254 FAM196AQ6ZSG2 479 aa23.17■■□□□ 1.3
TMEM41A-201ENST00000296254 BARGINQ6ZT62 677 aa23.17■■□□□ 1.3
TMEM41A-201ENST00000296254 SRPK2P78362 688 aaKnown RBP23.16■■□□□ 1.3
TMEM41A-201ENST00000296254 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
TMEM41A-201ENST00000296254 BRD4O60885 1362 aaPredicted RBP23.14■■□□□ 1.3
TMEM41A-201ENST00000296254 TRIM37O94972 964 aa23.14■■□□□ 1.29
TMEM41A-201ENST00000296254 EVA1CP58658 441 aa23.14■■□□□ 1.29
TMEM41A-201ENST00000296254 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.29
TMEM41A-201ENST00000296254 PARD3Q8TEW0 1356 aa23.14■■□□□ 1.29
TMEM41A-201ENST00000296254 COL5A2P05997 1499 aaPredicted RBP23.13■■□□□ 1.29
TMEM41A-201ENST00000296254 EZH2Q15910 746 aaKnown RBP23.13■■□□□ 1.29
TMEM41A-201ENST00000296254 GCP02774 474 aa23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 USP6P35125 1406 aa23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 R3HDM1Q15032 1099 aaKnown RBP23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 NLRP13Q86W25 1043 aa23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 CAMKK2Q96RR4 588 aa23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 CABP2Q9NPB3 220 aa23.12■■□□□ 1.29
TMEM41A-201ENST00000296254 TCP11L2Q8N4U5 519 aa23.11■■□□□ 1.29
TMEM41A-201ENST00000296254 PARP4Q9UKK3 1724 aaKnown RBP23.11■■□□□ 1.29
TMEM41A-201ENST00000296254 RREB1Q92766 1687 aa23.1■■□□□ 1.29
TMEM41A-201ENST00000296254 SLIT3O75094 1523 aa23.1■■□□□ 1.29
TMEM41A-201ENST00000296254 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
TMEM41A-201ENST00000296254 THRAP3Q9Y2W1 955 aaKnown RBP23.09■■□□□ 1.29
TMEM41A-201ENST00000296254 APBA3O96018 575 aa23.07■■□□□ 1.28
TMEM41A-201ENST00000296254 CRB1P82279 1406 aa23.07■■□□□ 1.28
TMEM41A-201ENST00000296254 PIK3C2AO00443 1686 aa23.06■■□□□ 1.28
TMEM41A-201ENST00000296254 NUP188Q5SRE5 1749 aa23.06■■□□□ 1.28
TMEM41A-201ENST00000296254 CABP1Q9NZU7 370 aa23.06■■□□□ 1.28
TMEM41A-201ENST00000296254 TRPM1Q7Z4N2 1603 aa23.06■■□□□ 1.28
TMEM41A-201ENST00000296254 AATKQ6ZMQ8 1374 aa23.05■■□□□ 1.28
TMEM41A-201ENST00000296254 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
TMEM41A-201ENST00000296254 LRRC37A3O60309 1634 aa23.03■■□□□ 1.28
TMEM41A-201ENST00000296254 NLRP6P59044 892 aa23.02■■□□□ 1.28
TMEM41A-201ENST00000296254 EVC2Q86UK5 1308 aa23.02■■□□□ 1.28
TMEM41A-201ENST00000296254 PEAK1Q9H792 1746 aa23.02■■□□□ 1.28
TMEM41A-201ENST00000296254 OVOS2A0A0G2JMS6 1433 aa23.01■■□□□ 1.27
TMEM41A-201ENST00000296254 OVOS2A0A0J9YW53 1432 aa23.01■■□□□ 1.27
TMEM41A-201ENST00000296254 OVOS2Q6IE36 1432 aa23.01■■□□□ 1.27
TMEM41A-201ENST00000296254 COL18A1P39060 1754 aa23■■□□□ 1.27
TMEM41A-201ENST00000296254 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
TMEM41A-201ENST00000296254 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 C11orf95C9JLR9 678 aaPredicted RBP22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 RGPD3A6NKT7 1758 aaPredicted RBP22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 RGPD4Q7Z3J3 1758 aa22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 WNK3Q9BYP7 1800 aa22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
TMEM41A-201ENST00000296254 AKAP12Q02952 1782 aa22.97■■□□□ 1.27
TMEM41A-201ENST00000296254 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
TMEM41A-201ENST00000296254 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
TMEM41A-201ENST00000296254 NBPF14Q5TI25 921 aa22.94■■□□□ 1.26
TMEM41A-201ENST00000296254 TOM1L2Q6ZVM7 507 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms