RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 WDR63Q8IWG1 891 aa20.88■□□□□ 0.93
CDCP1-201ENST00000296129 NSD3Q9BZ95 1437 aa20.88■□□□□ 0.93
CDCP1-201ENST00000296129 FSD1Q9BTV5 496 aa20.88■□□□□ 0.93
CDCP1-201ENST00000296129 ATAD2Q6PL18 1390 aa20.87■□□□□ 0.93
CDCP1-201ENST00000296129 RRS1Q15050 365 aaKnown RBP20.87■□□□□ 0.93
CDCP1-201ENST00000296129 DHX16O60231 1041 aaKnown RBP20.87■□□□□ 0.93
CDCP1-201ENST00000296129 CLASRPQ8N2M8 674 aaKnown RBP20.87■□□□□ 0.93
CDCP1-201ENST00000296129 STRN4Q9NRL3 753 aa20.87■□□□□ 0.93
CDCP1-201ENST00000296129 TATP17735 454 aaPredicted RBP20.86■□□□□ 0.93
CDCP1-201ENST00000296129 PDE4CQ08493 712 aa20.86■□□□□ 0.93
CDCP1-201ENST00000296129 GNAI2P04899 355 aa20.86■□□□□ 0.93
CDCP1-201ENST00000296129 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
CDCP1-201ENST00000296129 GCC1Q96CN9 775 aa20.85■□□□□ 0.93
CDCP1-201ENST00000296129 RBM42Q9BTD8 480 aaKnown RBP20.85■□□□□ 0.93
CDCP1-201ENST00000296129 HDGFL1Q5TGJ6 251 aa20.85■□□□□ 0.93
CDCP1-201ENST00000296129 RALYLQ86SE5 291 aaKnown RBP20.84■□□□□ 0.93
CDCP1-201ENST00000296129 FYB1O15117 783 aa20.84■□□□□ 0.93
CDCP1-201ENST00000296129 DNAJC2Q99543 621 aaKnown RBP20.84■□□□□ 0.93
CDCP1-201ENST00000296129 KIF6Q6ZMV9 814 aa20.83■□□□□ 0.93
CDCP1-201ENST00000296129 FAM177BA6PVY3 158 aa20.83■□□□□ 0.93
CDCP1-201ENST00000296129 TPM2P07951 284 aa20.83■□□□□ 0.93
CDCP1-201ENST00000296129 CCDC27Q2M243 656 aa20.83■□□□□ 0.93
CDCP1-201ENST00000296129 TSR1Q2NL82 804 aaKnown RBP20.83■□□□□ 0.93
CDCP1-201ENST00000296129 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.92
CDCP1-201ENST00000296129 ZNF530Q6P9A1 599 aaPredicted RBP20.82■□□□□ 0.92
CDCP1-201ENST00000296129 MAP3K1Q13233 1512 aa20.82■□□□□ 0.92
CDCP1-201ENST00000296129 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
CDCP1-201ENST00000296129 CD109Q6YHK3 1445 aa20.81■□□□□ 0.92
CDCP1-201ENST00000296129 CT47B1P0C2W7 299 aaPredicted RBP20.81■□□□□ 0.92
CDCP1-201ENST00000296129 PSMA5P28066 241 aa20.81■□□□□ 0.92
CDCP1-201ENST00000296129 NFKBIBQ15653 356 aa20.81■□□□□ 0.92
CDCP1-201ENST00000296129 ANKLE2Q86XL3 938 aa20.81■□□□□ 0.92
CDCP1-201ENST00000296129 URB2Q14146 1524 aaKnown RBP20.8■□□□□ 0.92
CDCP1-201ENST00000296129 TPM1P09493 284 aa20.8■□□□□ 0.92
CDCP1-201ENST00000296129 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
CDCP1-201ENST00000296129 CCT4P50991 539 aaKnown RBP20.8■□□□□ 0.92
CDCP1-201ENST00000296129 ATF7IPQ6VMQ6 1270 aa20.8■□□□□ 0.92
CDCP1-201ENST00000296129 POGZQ7Z3K3 1410 aa20.8■□□□□ 0.92
CDCP1-201ENST00000296129 MVPQ14764 893 aaKnown RBP20.79■□□□□ 0.92
CDCP1-201ENST00000296129 CABP4P57796 275 aa20.79■□□□□ 0.92
CDCP1-201ENST00000296129 ZNF428Q96B54 188 aa20.79■□□□□ 0.92
CDCP1-201ENST00000296129 NUDT16Q96DE0 195 aaKnown RBP20.79■□□□□ 0.92
CDCP1-201ENST00000296129 CTDP1Q9Y5B0 961 aaPredicted RBP20.79■□□□□ 0.92
CDCP1-201ENST00000296129 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
CDCP1-201ENST00000296129 ERC1Q8IUD2 1116 aa20.78■□□□□ 0.92
CDCP1-201ENST00000296129 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.78■□□□□ 0.92
CDCP1-201ENST00000296129 GOLGA6L1Q8N7Z2 621 aa20.78■□□□□ 0.92
CDCP1-201ENST00000296129 HOOK1Q9UJC3 728 aaKnown RBP20.77■□□□□ 0.92
CDCP1-201ENST00000296129 SAFBQ15424 915 aaKnown RBP eCLIP20.77■□□□□ 0.92
CDCP1-201ENST00000296129 TOM1L2Q6ZVM7 507 aa20.77■□□□□ 0.92
CDCP1-201ENST00000296129 SASS6Q6UVJ0 657 aa20.77■□□□□ 0.92
CDCP1-201ENST00000296129 TCEAL9Q9UHQ7 104 aa20.77■□□□□ 0.92
CDCP1-201ENST00000296129 FAM135AQ9P2D6 1515 aa20.77■□□□□ 0.92
CDCP1-201ENST00000296129 CEP89Q96ST8 783 aa20.77■□□□□ 0.91
CDCP1-201ENST00000296129 FCHSD2O94868 740 aa20.76■□□□□ 0.91
CDCP1-201ENST00000296129 WAPLQ7Z5K2 1190 aa20.76■□□□□ 0.91
CDCP1-201ENST00000296129 CCDC47Q96A33 483 aaKnown RBP20.76■□□□□ 0.91
CDCP1-201ENST00000296129 SPG7Q9UQ90 795 aa20.76■□□□□ 0.91
CDCP1-201ENST00000296129 CCDC73Q6ZRK6 1079 aa20.76■□□□□ 0.91
CDCP1-201ENST00000296129 C11orf95C9JLR9 678 aaPredicted RBP20.75■□□□□ 0.91
CDCP1-201ENST00000296129 XPCQ01831 940 aaPredicted RBP20.75■□□□□ 0.91
CDCP1-201ENST00000296129 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 PCMTD1Q96MG8 357 aaPredicted RBP20.75■□□□□ 0.91
CDCP1-201ENST00000296129 A0A0U1RQG5 324 aaPredicted RBP20.75■□□□□ 0.91
CDCP1-201ENST00000296129 NEK4P51957 841 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 DDX54Q8TDD1 881 aaKnown RBP20.75■□□□□ 0.91
CDCP1-201ENST00000296129 SRCIN1Q9C0H9 1055 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 TBC1D2BQ9UPU7 963 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 KDM4AO75164 1064 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 LRRCC1Q9C099 1032 aa20.75■□□□□ 0.91
CDCP1-201ENST00000296129 MYL6BP14649 208 aa20.74■□□□□ 0.91
CDCP1-201ENST00000296129 CCAR2Q8N163 923 aaKnown RBP20.74■□□□□ 0.91
CDCP1-201ENST00000296129 ZNF592Q92610 1267 aa20.74■□□□□ 0.91
CDCP1-201ENST00000296129 HIP1O00291 1037 aa20.74■□□□□ 0.91
CDCP1-201ENST00000296129 SLFN5Q08AF3 891 aa20.74■□□□□ 0.91
CDCP1-201ENST00000296129 SIL1Q9H173 461 aa20.74■□□□□ 0.91
CDCP1-201ENST00000296129 NFE2L2Q16236 605 aa20.73■□□□□ 0.91
CDCP1-201ENST00000296129 TMPOP42166 694 aaKnown RBP20.73■□□□□ 0.91
CDCP1-201ENST00000296129 PEG3Q9GZU2 1588 aa20.73■□□□□ 0.91
CDCP1-201ENST00000296129 TTC39AQ5SRH9 613 aa20.72■□□□□ 0.91
CDCP1-201ENST00000296129 RABEP1Q15276 862 aa20.72■□□□□ 0.91
CDCP1-201ENST00000296129 MAP4K4O95819 1239 aaPredicted RBP20.72■□□□□ 0.91
CDCP1-201ENST00000296129 ANKRD20A12PQ8NF67 263 aa20.72■□□□□ 0.91
CDCP1-201ENST00000296129 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
CDCP1-201ENST00000296129 ZNF608Q9ULD9 1512 aaPredicted RBP20.71■□□□□ 0.91
CDCP1-201ENST00000296129 CNNM1Q9NRU3 951 aa20.71■□□□□ 0.91
CDCP1-201ENST00000296129 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
CDCP1-201ENST00000296129 NCOA1Q15788 1441 aa20.71■□□□□ 0.91
CDCP1-201ENST00000296129 CHD1LQ86WJ1 897 aa20.7■□□□□ 0.9
CDCP1-201ENST00000296129 MTMR7Q9Y216 660 aa20.7■□□□□ 0.9
CDCP1-201ENST00000296129 ADGRF5Q8IZF2 1346 aa20.7■□□□□ 0.9
CDCP1-201ENST00000296129 ANO8Q9HCE9 1232 aaPredicted RBP20.69■□□□□ 0.9
CDCP1-201ENST00000296129 CCDC158Q5M9N0 1113 aa20.69■□□□□ 0.9
CDCP1-201ENST00000296129 SAMD1Q6SPF0 538 aaPredicted RBP20.69■□□□□ 0.9
CDCP1-201ENST00000296129 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
CDCP1-201ENST00000296129 BACH2Q9BYV9 841 aa20.68■□□□□ 0.9
CDCP1-201ENST00000296129 BRMS1Q9HCU9 246 aa20.68■□□□□ 0.9
CDCP1-201ENST00000296129 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
CDCP1-201ENST00000296129 MCM2P49736 904 aa20.67■□□□□ 0.9
CDCP1-201ENST00000296129 THUMPD2Q9BTF0 503 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms