RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZRANB1Q9UGI0 708 aa30.43■■■□□ 2.46
PTX3-201ENST00000295927 TTC21BQ7Z4L5 1316 aa30.43■■■□□ 2.46
PTX3-201ENST00000295927 SALL2Q9Y467 1007 aaPredicted RBP30.41■■■□□ 2.46
PTX3-201ENST00000295927 MAP2P11137 1827 aaKnown RBP30.4■■■□□ 2.46
PTX3-201ENST00000295927 NGDNQ8NEJ9 315 aaKnown RBP30.4■■■□□ 2.46
PTX3-201ENST00000295927 SSH2Q76I76 1423 aa30.4■■■□□ 2.46
PTX3-201ENST00000295927 PROSER2Q86WR7 435 aaPredicted RBP30.39■■■□□ 2.46
PTX3-201ENST00000295927 COG3Q96JB2 828 aa30.39■■■□□ 2.46
PTX3-201ENST00000295927 STRCP1A6NGW2 1772 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 C14orf37Q86TY3 774 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
PTX3-201ENST00000295927 COL3A1P02461 1466 aaPredicted RBP30.37■■■□□ 2.45
PTX3-201ENST00000295927 SMG6Q86US8 1419 aaKnown RBP30.37■■■□□ 2.45
PTX3-201ENST00000295927 CCDC146Q8IYE0 955 aa30.36■■■□□ 2.45
PTX3-201ENST00000295927 FBLN1P23142 703 aa30.35■■■□□ 2.45
PTX3-201ENST00000295927 POLKQ9UBT6 870 aa30.34■■■□□ 2.45
PTX3-201ENST00000295927 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
PTX3-201ENST00000295927 TTC21AQ8NDW8 1320 aa30.32■■■□□ 2.45
PTX3-201ENST00000295927 NUDCQ9Y266 331 aa30.32■■■□□ 2.44
PTX3-201ENST00000295927 AATKQ6ZMQ8 1374 aa30.32■■■□□ 2.44
PTX3-201ENST00000295927 OVOS2A0A0J9YW53 1432 aa30.31■■■□□ 2.44
PTX3-201ENST00000295927 OVOS2Q6IE36 1432 aa30.31■■■□□ 2.44
PTX3-201ENST00000295927 PDE3BQ13370 1112 aa30.3■■■□□ 2.44
PTX3-201ENST00000295927 PHF8Q9UPP1 1060 aa30.3■■■□□ 2.44
PTX3-201ENST00000295927 SUPT16HQ9Y5B9 1047 aaKnown RBP30.28■■■□□ 2.44
PTX3-201ENST00000295927 APAF1O14727 1248 aa30.27■■■□□ 2.44
PTX3-201ENST00000295927 PPM1GO15355 546 aaPredicted RBP30.26■■■□□ 2.44
PTX3-201ENST00000295927 EMILIN1Q9Y6C2 1016 aa30.26■■■□□ 2.44
PTX3-201ENST00000295927 PIK3C2AO00443 1686 aa30.26■■■□□ 2.43
PTX3-201ENST00000295927 U2AF1L5P0DN76 240 aaPredicted RBP30.26■■■□□ 2.43
PTX3-201ENST00000295927 U2AF1Q01081 240 aaKnown RBP eCLIP30.26■■■□□ 2.43
PTX3-201ENST00000295927 DIAPH1O60610 1272 aaKnown RBP30.25■■■□□ 2.43
PTX3-201ENST00000295927 ESCO1Q5FWF5 840 aa30.25■■■□□ 2.43
PTX3-201ENST00000295927 C19orf44Q9H6X5 657 aa30.25■■■□□ 2.43
PTX3-201ENST00000295927 TMEM94Q12767 1356 aa30.24■■■□□ 2.43
PTX3-201ENST00000295927 RUNDC1Q96C34 613 aa30.24■■■□□ 2.43
PTX3-201ENST00000295927 CDK12Q9NYV4 1490 aaPredicted RBP30.23■■■□□ 2.43
PTX3-201ENST00000295927 RRS1Q15050 365 aaKnown RBP30.22■■■□□ 2.43
PTX3-201ENST00000295927 NCOA3Q9Y6Q9 1424 aa30.22■■■□□ 2.43
PTX3-201ENST00000295927 USP31Q70CQ4 1352 aa30.22■■■□□ 2.43
PTX3-201ENST00000295927 U2SURPO15042 1029 aaKnown RBP30.22■■■□□ 2.43
PTX3-201ENST00000295927 ZNF521Q96K83 1311 aa30.21■■■□□ 2.43
PTX3-201ENST00000295927 CDCA7LQ96GN5 454 aa30.21■■■□□ 2.43
PTX3-201ENST00000295927 NEFLP07196 543 aa30.19■■■□□ 2.42
PTX3-201ENST00000295927 NGEFQ8N5V2 710 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 ORAI2Q96SN7 254 aa30.18■■■□□ 2.42
PTX3-201ENST00000295927 FKBP8Q14318 412 aa30.17■■■□□ 2.42
PTX3-201ENST00000295927 USP54Q70EL1 1684 aa30.17■■■□□ 2.42
PTX3-201ENST00000295927 MARF1Q9Y4F3 1742 aaKnown RBP30.17■■■□□ 2.42
PTX3-201ENST00000295927 C1orf167Q5SNV9 1468 aa30.16■■■□□ 2.42
PTX3-201ENST00000295927 PAK3O75914 559 aaPredicted RBP30.15■■■□□ 2.42
PTX3-201ENST00000295927 TCP11L2Q8N4U5 519 aa30.15■■■□□ 2.42
PTX3-201ENST00000295927 XIRP1Q702N8 1843 aaKnown RBP30.15■■■□□ 2.42
PTX3-201ENST00000295927 DCCP43146 1447 aa30.15■■■□□ 2.42
PTX3-201ENST00000295927 NLRP6P59044 892 aa30.14■■■□□ 2.41
PTX3-201ENST00000295927 PSME1Q06323 249 aa30.14■■■□□ 2.41
PTX3-201ENST00000295927 ATF3P18847 181 aa30.13■■■□□ 2.41
PTX3-201ENST00000295927 KIF1AQ12756 1690 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 ABTB2Q8N961 1025 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 PEAK1Q9H792 1746 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 IL13P35225 146 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 GOLGA2Q08379 1002 aa30.12■■■□□ 2.41
PTX3-201ENST00000295927 SOX12O15370 315 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 PLEKHF1Q96S99 279 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 MST1RQ04912 1400 aa30.11■■■□□ 2.41
PTX3-201ENST00000295927 NUTM2GQ5VZR2 741 aa30.1■■■□□ 2.41
PTX3-201ENST00000295927 RRP7AQ9Y3A4 280 aaKnown RBP30.09■■■□□ 2.41
PTX3-201ENST00000295927 LRRC7Q96NW7 1537 aa30.09■■■□□ 2.41
PTX3-201ENST00000295927 FOXO3O43524 673 aa30.08■■■□□ 2.41
PTX3-201ENST00000295927 ZNF335Q9H4Z2 1342 aaPredicted RBP30.08■■■□□ 2.41
PTX3-201ENST00000295927 NEUROD2Q15784 382 aa30.07■■■□□ 2.4
PTX3-201ENST00000295927 MSH6P52701 1360 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 WWC1Q8IX03 1113 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 PNNQ9H307 717 aaKnown RBP30.06■■■□□ 2.4
PTX3-201ENST00000295927 MAP3K19Q56UN5 1328 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 FCHSD2O94868 740 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 CADPS2Q86UW7 1296 aa30.06■■■□□ 2.4
PTX3-201ENST00000295927 SLFN5Q08AF3 891 aa30.05■■■□□ 2.4
PTX3-201ENST00000295927 MAPK8IP3Q9UPT6 1336 aa30.04■■■□□ 2.4
PTX3-201ENST00000295927 NCBP3Q53F19 620 aaKnown RBP30.04■■■□□ 2.4
PTX3-201ENST00000295927 PHF23Q9BUL5 403 aaPredicted RBP30.04■■■□□ 2.4
PTX3-201ENST00000295927 DUSP27Q5VZP5 1158 aa30.03■■■□□ 2.4
PTX3-201ENST00000295927 RSPH6AQ9H0K4 717 aa30.03■■■□□ 2.4
PTX3-201ENST00000295927 TRPM3Q9HCF6 1732 aaPredicted RBP30.03■■■□□ 2.4
PTX3-201ENST00000295927 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
PTX3-201ENST00000295927 CCDC27Q2M243 656 aa30.02■■■□□ 2.4
PTX3-201ENST00000295927 SBNO1A3KN83 1393 aa30.01■■■□□ 2.4
PTX3-201ENST00000295927 RNF123Q5XPI4 1314 aa30.01■■■□□ 2.4
PTX3-201ENST00000295927 IRX6P78412 446 aaPredicted RBP30.01■■■□□ 2.39
PTX3-201ENST00000295927 EIF4A2Q14240 407 aaKnown RBP30.01■■■□□ 2.39
PTX3-201ENST00000295927 DMRT2Q9Y5R5 561 aa30.01■■■□□ 2.39
PTX3-201ENST00000295927 HMOX1P09601 288 aa30■■■□□ 2.39
PTX3-201ENST00000295927 HSP90AB2PQ58FF8 381 aa30■■■□□ 2.39
PTX3-201ENST00000295927 TRMT2AQ8IZ69 625 aaKnown RBP30■■■□□ 2.39
PTX3-201ENST00000295927 SPINK5Q9NQ38 1064 aaPredicted RBP30■■■□□ 2.39
PTX3-201ENST00000295927 RCAN3Q9UKA8 241 aa30■■■□□ 2.39
PTX3-201ENST00000295927 PRKAR2BP31323 418 aa29.99■■■□□ 2.39
PTX3-201ENST00000295927 KRT28Q7Z3Y7 464 aa29.99■■■□□ 2.39
PTX3-201ENST00000295927 FLT4P35916 1363 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms